Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.12G042700 Carya illinoinensis HOM05D007169 ORTHO05D007243 1.9e-144 515.8 256 100.0
QL10p002966 Quercus lobata HOM05D007169 ORTHO05D007243 2.0e-104 382.9 254 78.3
Cfa018798 Carpinus fangiana HOM05D007169 ORTHO05D007243 1.6e-98 363.2 208 86.1
Haze_07134 Corylus avellana HOM05D007169 ORTHO05D007243 2.3e-97 359.4 208 85.1
Glyma.06G170200 Glycine max HOM05D007169 ORTHO05D007243 4.4e-88 328.6 222 71.6
Phvul.009G166500 Phaseolus vulgaris HOM05D007169 ORTHO05D007243 2.2e-87 326.2 217 74.2
Prupe.5G151300 Prunus persica HOM05D007169 ORTHO05D007243 2.2e-87 326.2 258 67.8
Lj1g0026378 Lotus japonicus HOM05D007169 ORTHO05D007243 5.9e-85 318.2 214 72.9
Psat5g051240 Pisum sativum HOM05D007169 ORTHO05D007243 1.7e-84 316.6 228 70.2
TPR.G14220 Trifolium pratense HOM05D007169 ORTHO05D007243 3.3e-83 312.4 227 68.3
ClCG03G003730 Citrullus lanatus HOM05D007169 ORTHO05D007243 3.6e-82 308.9 254 67.3
arahy.Tifrunner.gnm1.ann1.NVZ1RT Arachis hypogaea HOM05D007169 ORTHO05D007243 4.7e-82 308.5 219 69.9
arahy.Tifrunner.gnm1.ann1.ZT3MCZ Arachis hypogaea HOM05D007169 ORTHO05D007243 4.7e-82 308.5 219 69.9
CsaV3_1G009620 Cucumis sativus L. HOM05D007169 ORTHO05D007243 1.0e-81 307.4 256 67.6
MELO3C002358.2 Cucumis melo HOM05D007169 ORTHO05D007243 2.3e-81 306.2 261 66.3
Ca_16044_v3 Cicer arietinum L. HOM05D007169 ORTHO05D007243 3.0e-81 305.8 231 67.5
Duzib068G0521 Durio zibethinus HOM05D007169 ORTHO05D007243 6.8e-81 304.7 252 62.7
FvH4_5g08300 Fragaria vesca HOM05D007169 ORTHO05D007243 6.8e-81 304.7 246 64.6
RcHm_v2.0_Chr7g0190221 Rosa chinensis HOM05D007169 ORTHO05D007243 8.9e-81 304.3 230 67.0
Thecc.03G128900 Theobroma cacao HOM05D007169 ORTHO05D007243 1.5e-80 303.5 246 62.6
Medtr3g099350 Medicago truncatula HOM05D007169 ORTHO05D007243 4.4e-80 302.0 228 66.2
Gohir.D09G247400 Gossypium hirsutum HOM05D007169 ORTHO05D007243 7.5e-80 301.2 248 61.3
Gorai.006G271900 Gossypium raimondii HOM05D007169 ORTHO05D007243 7.5e-80 301.2 248 61.3
FAN04G2393 Fragaria x ananassa HOM05D007169 ORTHO05D007243 1.7e-79 300.1 253 63.6
Gohir.A09G246900 Gossypium hirsutum HOM05D007169 ORTHO05D007243 6.4e-79 298.1 247 60.7
CANSAT80G1416 Cannabis sativa HOM05D007169 ORTHO05D007243 8.3e-79 297.7 246 68.3
FAN18G0310 Fragaria x ananassa HOM05D007169 ORTHO05D007243 7.0e-78 294.7 253 62.8
MD06G1142100 Malus domestica HOM05D007169 ORTHO05D007243 9.2e-78 294.3 259 61.0
MD14G1157400 Malus domestica HOM05D007169 ORTHO05D007243 2.0e-77 293.1 279 57.0
Manes.01G190300 Manihot esculenta HOM05D007169 ORTHO05D007243 1.0e-76 290.8 248 62.9
Cpa.g.sc13.118 Carica papaya HOM05D007169 ORTHO05D007243 3.9e-76 288.9 252 63.5
Lalb_Chr08g0237141 Lupinus albus HOM05D007169 ORTHO05D007243 3.3e-75 285.8 237 63.7
Ciclev10018838m.g Citrus clementina HOM05D003858 ORTHO05D005878 8.0e-74 281.2 269 58.7
TWI23G0849 Tripterygium wilfordii HOM05D007169 ORTHO05D007243 2.3e-73 279.6 253 60.9
Sabra15G0116800 Salix brachista HOM05D007169 ORTHO05D007243 2.6e-72 276.2 249 59.4
Sed0023866 Sechium edule HOM05D007169 ORTHO05D007243 7.5e-72 274.6 246 62.6
Atru.chr9.1127 Acer truncatum HOM05D007169 ORTHO05D007243 4.1e-70 268.9 257 55.3
Potri.015G096000 Populus trichocarpa HOM05D007169 ORTHO05D007243 7.0e-70 268.1 248 57.3
Sed0005692 Sechium edule HOM05D007169 ORTHO05D007243 1.3e-68 263.8 247 59.5
VMungo1309G2045 Vigna mungo HOM05D007169 ORTHO05D007243 1.7e-68 263.5 176 72.7
Potri.012G097500 Populus trichocarpa HOM05D007169 ORTHO05D007243 5.1e-68 261.9 249 56.6
Aa31LG3G6930 Aethionema arabicum HOM05D007169 ORTHO05D007243 4.7e-66 255.4 249 55.4
Medtr2g045120 Medicago truncatula HOM05D007169 ORTHO05D007243 4.7e-66 255.4 183 67.2
Medtr2g445400 Medicago truncatula HOM05D007169 ORTHO05D007243 4.7e-66 255.4 183 67.2
PGR044G0546 Punica granatum HOM05D007169 ORTHO05D007243 1.4e-65 253.8 249 55.0
Eucgr.K02727 Eucalyptus grandis HOM05D007169 ORTHO05D007243 1.2e-64 250.8 241 54.8
Gorai.004G276100 Gossypium raimondii HOM05D007169 ORTHO05D007243 1.3e-63 247.3 207 59.9
GSVIVG01008542001 Vitis vinifera HOM05D003858 ORTHO05D005878 2.9e-63 246.1 233 58.4
Thhalv10014456m.g Eutrema salsugineum HOM05D007169 ORTHO05D007243 8.3e-63 244.6 253 52.6
THA.LOC104803148 Tarenaya hassleriana HOM05D007169 ORTHO05D007243 1.9e-62 243.4 254 53.9
Carub.0008s1052 Capsella rubella HOM05D007169 ORTHO05D007243 3.2e-62 242.7 253 53.4
RhsimUnG0231000 Rhododendron simsii HOM05D007169 ORTHO05D007243 4.1e-62 242.3 241 53.5
CANSAT80G0844 Cannabis sativa HOM05D007169 ORTHO05D007243 3.5e-61 239.2 160 77.5
BolC2t08225H Brassica oleracea HOM05D007169 ORTHO05D007243 6.0e-61 238.4 250 51.6
AT5G50410 Arabidopsis thaliana HOM05D007169 ORTHO05D007243 1.0e-60 237.7 256 51.6
AL8G24630 Arabidopsis lyrata HOM05D007169 ORTHO05D007243 2.3e-60 236.5 253 51.8
BcaC03g14651 Brassica carinata HOM05D007169 ORTHO05D007243 2.3e-60 236.5 250 51.2
C02p20850 Brassica napus HOM05D007169 ORTHO05D007243 1.1e-59 234.2 247 51.0
A02p12790 Brassica napus HOM05D007169 ORTHO05D007243 1.5e-59 233.8 251 51.4
BraA02t06336Z Brassica rapa HOM05D007169 ORTHO05D007243 1.5e-59 233.8 251 51.4
BcaB05g24052 Brassica carinata HOM05D007169 ORTHO05D007243 5.6e-59 231.9 252 50.0
Sp6g12560 Schrenkiella parvula HOM05D007169 ORTHO05D007243 5.6e-59 231.9 253 51.8
SpUn0015_0080 Schrenkiella parvula HOM05D007169 ORTHO05D007243 5.6e-59 231.9 253 51.8
SpUn0039_0020 Schrenkiella parvula HOM05D007169 ORTHO05D007243 5.6e-59 231.9 253 51.8
TAR374G1569 Trochodendron aralioides HOM05D007169 ORTHO05D007243 6.2e-58 228.4 273 48.0
Hma1.2p1_0014F.1_g009470 Hydrangea macrophylla HOM05D007169 ORTHO05D007243 1.8e-57 226.9 231 54.1
Lalb_Chr23g0273701 Lupinus albus HOM05D007169 ORTHO05D007243 2.0e-56 223.4 209 56.0
Lsat_1_v5_gn_1_28980 Lactuca sativa HOM05D007169 ORTHO05D007243 7.6e-56 221.5 248 47.6
Gohir.D12G191801 Gossypium hirsutum HOM05D007169 ORTHO05D007243 1.1e-54 217.6 205 53.2
Gohir.D08G258666 Gossypium hirsutum HOM05D007169 ORTHO05D007243 1.9e-54 216.9 157 64.3
TAR371G0734 Trochodendron aralioides HOM05D007169 ORTHO05D007243 2.4e-54 216.5 234 50.0
Gorai.008G206100 Gossypium raimondii HOM05D007169 ORTHO05D007243 5.4e-54 215.3 205 52.7
Nn3g16473 Nelumbo nucifera HOM05D007169 ORTHO05D007243 6.0e-53 211.8 230 49.1
TAR622G0369 Trochodendron aralioides HOM05D007169 ORTHO05D007243 1.7e-52 210.3 252 46.0
Sc04g0000670 Simmondsia chinensis HOM05D007169 ORTHO05D007243 3.0e-52 209.5 234 50.4
ECA247G3219 Erigeron canadensis HOM05D007169 ORTHO05D007243 5.6e-51 205.3 224 48.2
Dinv23144 Davidia involucrata HOM05D007169 ORTHO05D007243 7.3e-51 204.9 206 57.8
Rhsim08G0190100 Rhododendron simsii HOM05D007169 ORTHO05D007243 2.8e-50 203.0 225 50.2
HanXRQChr02g0034741 Helianthus annuus HOM05D007169 ORTHO05D007243 8.1e-50 201.4 226 46.9
Actinidia18344 Actinidia chinensis HOM05D007169 ORTHO05D007243 4.4e-48 195.7 154 62.3
COL.COLO4_28120 Corchorus olitorius HOM05D007169 ORTHO05D007243 4.4e-48 195.7 246 45.9
FAN08G0105 Fragaria x ananassa HOM05D007169 ORTHO05D007243 4.4e-48 195.7 158 65.2
DCAR_016391 Daucus carota HOM05D007169 ORTHO05D007243 7.6e-48 194.9 180 53.3
vmacro07808 Vaccinium macrocarpon HOM05D007169 ORTHO05D007243 7.8e-45 184.9 325 36.3
CSS0048648 Camellia sinensis var. sinensis HOM05D007169 ORTHO05D007243 6.6e-44 181.8 138 65.9
DCAR_021617 Daucus carota HOM05D007169 ORTHO05D007243 4.3e-43 179.1 223 44.4
CARHR257950 Cardamine hirsuta HOM05D007169 ORTHO05D007243 5.6e-43 178.7 253 42.3
PSO478G3704 Papaver somniferum HOM05D007169 ORTHO05D007243 9.6e-43 177.9 264 40.2
HPP92_011766 Vanilla planifolia HOM05D007169 ORTHO05D007243 1.4e-41 174.1 217 44.2
PSO017G4677 Papaver somniferum HOM05D007169 ORTHO05D007243 1.8e-41 173.7 267 39.0
HPP92_011770 Vanilla planifolia HOM05D007169 ORTHO05D007243 2.4e-41 173.3 276 37.3
EL10Ac5g11418 Beta vulgaris HOM05D007169 ORTHO05D007243 5.8e-40 168.7 156 55.8
Cc06_g22780 Coffea canephora HOM05D007169 ORTHO05D007243 4.9e-39 165.6 153 60.1
Lj5A96T48 Lonicera japonica HOM05D007169 ORTHO05D007243 1.1e-38 164.5 145 57.2
AUR62029615 Chenopodium quinoa HOM05D007169 ORTHO05D007243 4.2e-38 162.5 140 60.0
Sopen03g031630 Solanum pennellii HOM05D007169 ORTHO05D007243 6.0e-37 158.7 146 58.9
Solyc03g112570.2 Solanum lycopersicum HOM05D007169 ORTHO05D007243 7.9e-37 158.3 146 58.9
MSTRG.11390 Avicennia marina HOM05D007169 ORTHO05D007243 1.0e-36 157.9 143 58.0
Aqoxy3G00802 Aquilegia oxysepala HOM05D007169 ORTHO05D007243 1.8e-36 157.1 240 41.7
PGSC0003DMG400018172 Solanum tuberosum HOM05D007169 ORTHO05D007243 1.8e-36 157.1 146 58.2
ATR0561G062 Amborella trichopoda HOM05D011398 ORTHO05D007243 3.0e-36 156.4 221 37.1
SalBow5G3517 Salvia bowleyana HOM05D007169 ORTHO05D007243 3.0e-36 156.4 144 56.9
Oeu006492.1 Olea europaea HOM05D007169 ORTHO05D007243 8.7e-36 154.8 145 54.5
SalBow5G4624 Salvia bowleyana HOM05D007169 ORTHO05D007243 1.1e-35 154.5 144 56.2
CAN.G338.2 Capsicum annuum HOM05D007169 ORTHO05D007243 1.5e-35 154.1 141 58.9
Ah.02g111120 Amaranthus hybridus HOM05D007169 ORTHO05D007243 4.3e-35 152.5 152 55.9
Peaxi162Scf00089g01624 Petunia axillaris HOM05D007169 ORTHO05D007243 7.4e-35 151.8 145 58.6
Migut.I00155 Erythranthe guttata HOM05D007169 ORTHO05D007243 8.1e-34 148.3 139 53.2
SGA_v2.0_scaffold56G20032 Striga asiatica HOM05D007169 ORTHO05D007243 1.1e-33 147.9 141 55.3
Os08g0531200 Oryza sativa ssp. japonica HOM05D011398 ORTHO05D007243 9.0e-33 144.8 239 36.8
Nitab4.5_0011992g0030 Nicotiana tabacum HOM05D007169 ORTHO05D007243 4.6e-29 132.5 143 55.2
Hund26053 Selenicereus undatus HOM05D007169 ORTHO05D007243 1.3e-28 131.0 196 40.8
Zm00001eb175120 Zea mays HOM05D011398 ORTHO05D007243 5.1e-28 129.0 268 31.7
unitig_0.g2530 Utricularia gibba HOM05D007169 ORTHO05D007243 2.5e-27 126.7 150 46.7
SEGI_24222 Sequoiadendron giganteum HOM05D007169 ORTHO05D007243 1.0e-20 104.8 99 47.5
Sabra12G0071300 Salix brachista HOM05D000677 ORTHO05D000727 3.1e-17 93.2 136 41.9
arahy.Tifrunner.gnm1.ann1.M1N3UH Arachis hypogaea HOM05D002218 ORTHO05D007243 1.5e-16 90.9 71 62.0
Mapoly0022s0039 Marchantia polymorpha HOM05D011398 ORTHO05D007243 2.2e-10 70.5 79 40.5
CBR_g46730 Chara braunii HOM05D011398 ORTHO05D007243 6.9e-09 65.5 84 44.0
CBR_g30247 Chara braunii HOM05D011398 ORTHO05D007243 1.0e-07 61.6 76 39.5


User provided reference genes

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