Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.12G034400 Carya illinoinensis HOM05D005390 ORTHO05D007086 5.9e-217 757.3 392 100.0
Cfa018904 Carpinus fangiana HOM05D005390 ORTHO05D007086 2.0e-180 636.0 387 85.0
QL10p005602 Quercus lobata HOM05D005390 ORTHO05D007086 5.9e-177 624.4 384 85.2
Haze_07289 Corylus avellana HOM05D005390 ORTHO05D007086 1.6e-174 616.3 423 77.5
GSVIVG01007574001 Vitis vinifera HOM05D005390 ORTHO05D007086 6.4e-155 551.2 392 70.9
CANSAT80G2255 Cannabis sativa HOM05D005390 ORTHO05D007086 3.2e-154 548.9 380 73.9
Manes.06G113700 Manihot esculenta HOM05D005390 ORTHO05D007086 6.6e-152 541.2 393 72.3
Thecc.03G120800 Theobroma cacao HOM05D005390 ORTHO05D007086 2.8e-150 535.8 391 71.9
Cpa.g.sc4.44 Carica papaya HOM05D005390 ORTHO05D007086 3.1e-149 532.3 397 69.5
Gohir.D12G190300 Gossypium hirsutum HOM05D005390 ORTHO05D007086 9.9e-148 527.3 394 70.6
Gorai.008G204100 Gossypium raimondii HOM05D005390 ORTHO05D007086 9.9e-148 527.3 394 70.6
ClCG03G003390 Citrullus lanatus HOM05D005390 ORTHO05D007086 2.9e-147 525.8 385 69.9
CsaV3_1G009190 Cucumis sativus L. HOM05D005390 ORTHO05D007086 8.4e-147 524.2 392 68.9
Gohir.A12G187300 Gossypium hirsutum HOM05D005390 ORTHO05D007086 1.4e-146 523.5 394 70.3
PGR083G1300 Punica granatum HOM05D005390 ORTHO05D007086 7.1e-146 521.2 384 70.6
Duzib205G1771 Durio zibethinus HOM05D005390 ORTHO05D007086 1.5e-143 513.5 394 70.1
Lj9C473T10 Lonicera japonica HOM05D005390 ORTHO05D007086 1.5e-143 513.5 390 69.7
TAR374G1738 Trochodendron aralioides HOM05D005390 ORTHO05D007086 1.5e-143 513.5 393 68.2
Actinidia19375 Actinidia chinensis HOM05D005390 ORTHO05D007086 4.3e-143 511.9 391 68.8
Lj1g0026120 Lotus japonicus HOM05D005390 ORTHO05D007086 8.1e-142 507.7 381 70.6
Ca_16101_v3 Cicer arietinum L. HOM05D005390 ORTHO05D007086 4.0e-141 505.4 365 72.1
Ca_30077_v3 Cicer arietinum L. HOM05D005390 ORTHO05D007086 4.0e-141 505.4 365 72.1
Nn4g22507 Nelumbo nucifera HOM05D005390 ORTHO05D007086 6.8e-141 504.6 395 66.6
arahy.Tifrunner.gnm1.ann1.EKVH9G Arachis hypogaea HOM05D005390 ORTHO05D007086 8.9e-141 504.2 395 68.4
CSS0013940 Camellia sinensis var. sinensis HOM05D005390 ORTHO05D007086 2.0e-140 503.1 386 68.4
Phvul.009G170000 Phaseolus vulgaris HOM05D005390 ORTHO05D007086 7.6e-140 501.1 385 68.3
Medtr3g075240 Medicago truncatula HOM05D005390 ORTHO05D007086 3.8e-139 498.8 374 70.6
Psat5g139480 Pisum sativum HOM05D005390 ORTHO05D007086 4.9e-139 498.4 359 73.3
Glyma.06G174300 Glycine max HOM05D005390 ORTHO05D007086 5.4e-138 495.0 381 69.6
Prupe.5G160000 Prunus persica HOM05D005390 ORTHO05D007086 1.6e-137 493.4 397 68.5
Rhsim08G0183100 Rhododendron simsii HOM05D005390 ORTHO05D007086 2.7e-137 492.7 387 67.4
Eucgr.B00166 Eucalyptus grandis HOM05D005390 ORTHO05D007086 1.0e-136 490.7 357 69.7
Glyma.04G191600 Glycine max HOM05D005390 ORTHO05D007086 8.7e-136 487.6 384 69.0
Lalb_Chr11g0069761 Lupinus albus HOM05D005390 ORTHO05D007086 2.8e-134 482.6 378 68.3
Nn7g37481 Nelumbo nucifera HOM05D005390 ORTHO05D007086 2.4e-133 479.6 396 64.1
FAN08G1670 Fragaria x ananassa HOM05D005390 ORTHO05D007086 5.3e-133 478.4 372 68.8
FAN18G2367 Fragaria x ananassa HOM05D005390 ORTHO05D007086 1.5e-132 476.9 373 68.4
MD06G1160400 Malus domestica HOM05D005390 ORTHO05D007086 2.0e-132 476.5 363 71.1
TWI09G0451 Tripterygium wilfordii HOM05D005390 ORTHO05D007086 4.5e-132 475.3 386 65.5
FvH4_5g07030 Fragaria vesca HOM05D005390 ORTHO05D007086 9.9e-132 474.2 377 67.6
TWI39G0214 Tripterygium wilfordii HOM05D005390 ORTHO05D007086 1.3e-131 473.8 387 65.1
Sc22g0003910 Simmondsia chinensis HOM05D005390 ORTHO05D007086 2.9e-131 472.6 364 68.4
Lsat_1_v5_gn_4_78320 Lactuca sativa HOM05D005390 ORTHO05D007086 4.9e-131 471.9 391 63.2
FAN13G2995 Fragaria x ananassa HOM05D005390 ORTHO05D007086 1.1e-130 470.7 376 67.6
RcHm_v2.0_Chr7g0191501 Rosa chinensis HOM05D005390 ORTHO05D007086 1.1e-130 470.7 363 69.4
HanXRQChr09g0272781 Helianthus annuus HOM05D005390 ORTHO05D007086 2.4e-130 469.5 391 64.5
Peaxi162Scf00763g00330 Petunia axillaris HOM05D005390 ORTHO05D007086 4.2e-130 468.8 373 66.8
TPR.G38664 Trifolium pratense HOM05D005390 ORTHO05D007086 5.4e-130 468.4 361 69.0
Ciclev10019194m.g Citrus clementina HOM05D005390 ORTHO05D007086 9.3e-130 467.6 401 66.3
THA.LOC104818200 Tarenaya hassleriana HOM05D005390 ORTHO05D007086 1.6e-129 466.8 397 64.2
Nitab4.5_0014349g0010 Nicotiana tabacum HOM05D005390 ORTHO05D007086 4.6e-129 465.3 370 65.9
PGSC0003DMG400027069 Solanum tuberosum HOM05D005390 ORTHO05D007086 6.0e-129 464.9 360 67.5
ECA232G3921 Erigeron canadensis HOM05D005390 ORTHO05D007086 1.8e-128 463.4 389 63.2
AL8G40290 Arabidopsis lyrata HOM05D005390 ORTHO05D007086 3.9e-128 462.2 394 63.5
MSTRG.11518 Avicennia marina HOM05D005390 ORTHO05D007086 5.1e-128 461.8 399 62.9
EL10Ac7g18053 Beta vulgaris HOM05D005390 ORTHO05D007086 6.7e-128 461.5 405 60.7
Solyc06g071850.3 Solanum lycopersicum HOM05D005390 ORTHO05D007086 1.9e-127 459.9 386 63.7
Sopen06g028130 Solanum pennellii HOM05D005390 ORTHO05D007086 7.4e-127 458.0 388 63.9
Sp2g26330 Schrenkiella parvula HOM05D005390 ORTHO05D007086 2.8e-126 456.1 398 62.3
A09p08180 Brassica napus HOM05D005390 ORTHO05D007086 3.6e-126 455.7 400 62.0
Aa31LG1G18770 Aethionema arabicum HOM05D005390 ORTHO05D007086 8.1e-126 454.5 399 63.7
Thhalv10003779m.g Eutrema salsugineum HOM05D005390 ORTHO05D007086 3.1e-125 452.6 399 61.9
BraA09t36469Z Brassica rapa HOM05D005390 ORTHO05D007086 4.0e-125 452.2 400 61.8
Carub.0008s2396 Capsella rubella HOM05D005390 ORTHO05D007086 2.0e-124 449.9 398 61.3
Migut.O00224 Erythranthe guttata HOM05D005390 ORTHO05D007086 3.4e-124 449.1 366 64.5
BolC9t53836H Brassica oleracea HOM05D005390 ORTHO05D007086 7.6e-124 448.0 390 63.1
vmacro19255 Vaccinium macrocarpon HOM05D005390 ORTHO05D007086 7.6e-124 448.0 430 58.1
AT5G63200 Arabidopsis thaliana HOM05D005390 ORTHO05D007086 8.4e-123 444.5 395 62.0
C09p09230 Brassica napus HOM05D005390 ORTHO05D007086 8.4e-123 444.5 390 62.6
Nitab4.5_0000003g0930 Nicotiana tabacum HOM05D005390 ORTHO05D007086 5.5e-122 441.8 368 63.6
DCAR_016426 Daucus carota HOM05D005390 ORTHO05D007086 2.1e-121 439.9 312 71.5
Dinv38486 Davidia involucrata HOM05D005390 ORTHO05D007086 3.5e-121 439.1 276 80.8
Aqoxy3G01354 Aquilegia oxysepala HOM05D005390 ORTHO05D007086 1.5e-119 433.7 371 63.6
Cc04_g10660 Coffea canephora HOM05D005390 ORTHO05D007086 1.9e-119 433.3 321 68.5
Sabra12G0066700 Salix brachista HOM05D005390 ORTHO05D007086 1.9e-119 433.3 393 60.3
Oeu011587.1 Olea europaea HOM05D005390 ORTHO05D007086 2.1e-118 429.9 318 68.9
Potri.012G092000 Populus trichocarpa HOM05D005390 ORTHO05D007086 6.2e-118 428.3 394 60.4
SGA_v2.0_scaffold25G10792 Striga asiatica HOM05D005390 ORTHO05D007086 8.1e-118 427.9 424 56.1
Hma1.2p1_0983F.1_g244080 Hydrangea macrophylla HOM05D005390 ORTHO05D007086 2.4e-117 426.4 287 77.0
COL.COLO4_04551 Corchorus olitorius HOM05D005390 ORTHO05D007086 3.1e-117 426.0 390 63.1
AUR62025748 Chenopodium quinoa HOM05D005390 ORTHO05D007086 2.9e-115 419.5 317 68.8
AUR62001260 Chenopodium quinoa HOM05D005390 ORTHO05D007086 6.0e-113 411.8 381 60.4
PSO017G5335 Papaver somniferum HOM05D005390 ORTHO05D007086 7.9e-113 411.4 356 62.6
PSO478G4661 Papaver somniferum HOM05D005390 ORTHO05D007086 7.9e-113 411.4 356 62.4
CAN.G1046.1 Capsicum annuum HOM05D005390 ORTHO05D007086 3.9e-112 409.1 297 70.0
Sed0027546 Sechium edule HOM05D005390 ORTHO05D007086 2.8e-110 402.9 263 76.4
unitig_22.g5443 Utricularia gibba HOM05D005390 ORTHO05D007086 1.1e-109 401.0 388 56.4
MELO3C002325.2 Cucumis melo HOM05D005390 ORTHO05D007086 5.3e-109 398.7 414 55.3
Nn1g05493 Nelumbo nucifera HOM05D005390 ORTHO05D007086 7.9e-105 384.8 381 57.5
VMungo1309G0829 Vigna mungo HOM05D005390 ORTHO05D007086 8.2e-102 374.8 267 73.4
Hund05621 Selenicereus undatus HOM05D005390 ORTHO05D007086 3.4e-100 369.4 386 54.1
Os01g0906600 Oryza sativa ssp. japonica HOM05D005390 ORTHO05D007086 7.7e-100 368.2 356 56.2
ATR0824G019 Amborella trichopoda HOM05D005390 ORTHO05D007086 6.5e-99 365.2 400 52.5
Zm00001eb144210 Zea mays HOM05D005390 ORTHO05D007086 6.7e-96 355.1 374 52.4
SEGI_06673 Sequoiadendron giganteum HOM05D005390 ORTHO05D007086 3.2e-90 336.3 363 52.3
MBI11_g46067_MAGBIO Magnolia biondii HOM05D005390 ORTHO05D007086 7.2e-90 335.1 320 59.7
Atru.BG.198.p Acer truncatum HOM05D005390 ORTHO05D007086 6.1e-81 305.4 259 64.1
MBI11_g46351_MAGBIO Magnolia biondii HOM05D005390 ORTHO05D007086 7.2e-74 282.0 283 58.7
Nn8g39688 Nelumbo nucifera HOM05D005390 ORTHO05D007086 2.4e-69 266.9 196 67.9
SMO356G0210 Selaginella moellendorffii HOM05D005390 ORTHO05D007086 7.7e-68 261.9 358 45.3
Mapoly0013s0178 Marchantia polymorpha HOM05D005390 ORTHO05D007086 2.5e-66 256.9 390 41.3
arahy.Tifrunner.gnm1.ann1.V8X883 Arachis hypogaea HOM05D005390 ORTHO05D007086 5.2e-64 249.2 395 43.5
HPP92_001962 Vanilla planifolia HOM05D005390 ORTHO05D007086 1.3e-62 244.6 376 42.3
CDE06G0744 Ceratophyllum demersum HOM05D005390 ORTHO05D007086 1.2e-57 228.0 174 67.2
AagrBONN_evm.TU.Sc2ySwM_228.344 Anthoceros agrestis HOM05D005390 ORTHO05D007086 2.8e-57 226.9 366 40.2
CsaV3_3G015410 Cucumis sativus L. HOM05D005390 ORTHO05D007086 4.4e-47 193.0 264 46.2
Nn5g27251 Nelumbo nucifera HOM05D005390 ORTHO05D007086 9.2e-45 185.3 268 45.1
FAN04G1107 Fragaria x ananassa HOM05D005390 ORTHO05D007086 2.8e-41 173.7 108 76.9
SalBow5G1843 Salvia bowleyana HOM05D005390 ORTHO05D007086 4.7e-41 172.9 228 46.5
Hma1.2p1_2683F.1_g326890 Hydrangea macrophylla HOM05D005390 ORTHO05D007086 8.9e-40 168.7 153 60.1
RcHm_v2.0_Chr5g0027631 Rosa chinensis HOM05D005390 ORTHO05D007086 3.5e-36 156.8 172 57.6
CARHR043650 Cardamine hirsuta HOM05D005390 ORTHO05D007086 1.7e-35 154.5 182 52.2
CsaV3_3G015420 Cucumis sativus L. HOM05D005390 ORTHO05D007086 2.3e-35 154.1 99 75.8
VMungo1309G2389 Vigna mungo HOM05D005390 ORTHO05D007086 4.1e-29 133.3 104 63.5
Nn1g06248 Nelumbo nucifera HOM05D005390 ORTHO05D007086 6.0e-28 129.4 78 82.1
Nn1g08373 Nelumbo nucifera HOM05D005390 ORTHO05D007086 1.0e-19 102.1 75 66.7
Oeu053506.1 Olea europaea HOM05D005390 ORTHO05D007086 1.3e-19 101.7 68 72.1
Nn6g32370 Nelumbo nucifera HOM05D005390 ORTHO05D007086 5.1e-19 99.8 75 65.3
Nn8g40909 Nelumbo nucifera HOM05D005390 ORTHO05D007086 1.4e-16 91.7 64 70.3
Nn2g15275 Nelumbo nucifera HOM05D005390 ORTHO05D007086 5.8e-15 86.3 64 64.1
TAR381G0053 Trochodendron aralioides HOM05D000018 ORTHO05D001172 2.9e-14 84.0 61 62.3
CAN.G755.13 Capsicum annuum HOM05D005390 ORTHO05D007086 2.4e-13 80.9 48 77.1
Nn5g28724 Nelumbo nucifera HOM05D005390 ORTHO05D007086 2.4e-13 80.9 55 67.3
Nn8g40618 Nelumbo nucifera HOM05D005390 ORTHO05D007086 4.2e-13 80.1 55 67.3
CAN.G1302.1 Capsicum annuum HOM05D005390 ORTHO05D002902 5.4e-13 79.7 291 26.1
CAN.G534.23 Capsicum annuum HOM05D005390 ORTHO05D007086 1.4e-08 65.1 50 60.0


User provided reference genes

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