Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.12G024900 Carya illinoinensis HOM05D006711 ORTHO05D008104 1.0e-45 186.4 95 100.0
Manes.14G068400 Manihot esculenta HOM05D006711 ORTHO05D008104 1.6e-30 136.0 92 76.1
Potri.012G078000 Populus trichocarpa HOM05D006711 ORTHO05D008104 2.0e-30 135.6 92 76.1
Potri.015G073300 Populus trichocarpa HOM05D006711 ORTHO05D008104 2.0e-30 135.6 92 76.1
Aa31LG11G810 Aethionema arabicum HOM05D006711 ORTHO05D008104 1.0e-29 133.3 92 73.9
Thecc.03G007500 Theobroma cacao HOM05D006711 ORTHO05D008104 1.0e-29 133.3 95 72.6
Sabra15G0097500 Salix brachista HOM05D006711 ORTHO05D008104 1.3e-29 132.9 92 75.0
THA.LOC104798980 Tarenaya hassleriana HOM05D000086 ORTHO05D008104 1.7e-29 132.5 94 72.3
Aa31LG4G16690 Aethionema arabicum HOM05D006711 ORTHO05D008104 2.9e-29 131.7 92 73.9
AL5G27360 Arabidopsis lyrata HOM05D006711 ORTHO05D008104 2.9e-29 131.7 92 73.9
CARHR156770 Cardamine hirsuta HOM05D006711 ORTHO05D008104 2.9e-29 131.7 92 73.9
Gohir.A12G275900 Gossypium hirsutum HOM05D006711 ORTHO05D008104 2.9e-29 131.7 93 73.1
Gorai.008G297100 Gossypium raimondii HOM05D006711 ORTHO05D008104 2.9e-29 131.7 93 73.1
THA.LOC104821460 Tarenaya hassleriana HOM05D006711 ORTHO05D008104 2.9e-29 131.7 92 73.9
Duzib068G0631 Durio zibethinus HOM05D006711 ORTHO05D008104 3.8e-29 131.3 95 71.6
Thhalv10010870m.g Eutrema salsugineum HOM05D006711 ORTHO05D008104 3.8e-29 131.3 92 72.8
Gohir.D12G276600 Gossypium hirsutum HOM05D006711 ORTHO05D008104 3.8e-29 131.3 93 73.1
Sabra12G0055800 Salix brachista HOM05D006711 ORTHO05D008104 3.8e-29 131.3 92 73.9
Ciclev10023110m.g Citrus clementina HOM05D006711 ORTHO05D008104 6.5e-29 130.6 95 72.6
Sp5g13950 Schrenkiella parvula HOM05D006711 ORTHO05D008104 6.5e-29 130.6 92 72.8
COL.COLO4_24770 Corchorus olitorius HOM05D006711 ORTHO05D008104 8.5e-29 130.2 95 71.6
Medtr4g106700 Medicago truncatula HOM05D006711 ORTHO05D008104 8.5e-29 130.2 95 72.6
Ca_21901_v3 Cicer arietinum L. HOM05D006711 ORTHO05D008104 1.1e-28 129.8 95 70.5
BcaC07g39289 Brassica carinata HOM05D006711 ORTHO05D008104 3.2e-28 128.3 92 72.8
A06p19610 Brassica napus HOM05D006711 ORTHO05D008104 3.2e-28 128.3 92 72.8
C08p22960 Brassica napus HOM05D006711 ORTHO05D008104 3.2e-28 128.3 92 72.8
BolC8t49933H Brassica oleracea HOM05D006711 ORTHO05D008104 3.2e-28 128.3 92 72.8
BraA06t25041Z Brassica rapa HOM05D006711 ORTHO05D008104 3.2e-28 128.3 92 72.8
Duzib084G0075 Durio zibethinus HOM05D006711 ORTHO05D008104 7.2e-28 127.1 93 71.0
BcaB01g00848 Brassica carinata HOM05D006711 ORTHO05D008104 9.4e-28 126.7 92 71.7
Cfa019085 Carpinus fangiana HOM05D006711 ORTHO05D008104 9.4e-28 126.7 95 70.5
Cpa.g.sc134.10 Carica papaya HOM05D006711 ORTHO05D008104 1.6e-27 125.9 95 68.4
TWI15G0492 Tripterygium wilfordii HOM05D006711 ORTHO05D008104 1.6e-27 125.9 90 72.2
Atru.chr9.2428 Acer truncatum HOM05D006711 ORTHO05D008104 2.1e-27 125.6 95 69.5
CANSAT11G1423 Cannabis sativa HOM05D006711 ORTHO05D008104 3.6e-27 124.8 95 68.4
FvH4_5g05020 Fragaria vesca HOM05D006711 ORTHO05D008104 3.6e-27 124.8 92 69.6
FAN04G0211 Fragaria x ananassa HOM05D006711 ORTHO05D008104 3.6e-27 124.8 92 69.6
FAN08G2471 Fragaria x ananassa HOM05D006711 ORTHO05D008104 3.6e-27 124.8 92 69.6
FAN13G1278 Fragaria x ananassa HOM05D006711 ORTHO05D008104 3.6e-27 124.8 92 69.6
FAN18G1479 Fragaria x ananassa HOM05D006711 ORTHO05D008104 3.6e-27 124.8 92 69.6
FAN18G2156 Fragaria x ananassa HOM05D006711 ORTHO05D008104 3.6e-27 124.8 92 69.6
ClCG01G014050 Citrullus lanatus HOM05D006711 ORTHO05D008104 4.7e-27 124.4 93 67.7
Eucgr.K02867 Eucalyptus grandis HOM05D006711 ORTHO05D008104 4.7e-27 124.4 95 67.4
Lj4g0001750 Lotus japonicus HOM05D006711 ORTHO05D008104 4.7e-27 124.4 95 68.4
CsaV3_1G008300 Cucumis sativus L. HOM05D006711 ORTHO05D008104 8.0e-27 123.6 93 68.8
Hund09419 Selenicereus undatus HOM05D006711 ORTHO05D008104 1.0e-26 123.2 89 75.3
PGR044G2080 Punica granatum HOM05D006711 ORTHO05D008104 1.8e-26 122.5 92 69.6
MELO3C002246.2 Cucumis melo HOM05D006711 ORTHO05D008104 2.3e-26 122.1 93 67.7
MD06G1177900 Malus domestica HOM05D006711 ORTHO05D008104 3.0e-26 121.7 92 67.4
MD14G1184500 Malus domestica HOM05D006711 ORTHO05D008104 3.0e-26 121.7 92 67.4
TPR.G37552 Trifolium pratense HOM05D006711 ORTHO05D008104 4.0e-26 121.3 89 70.8
Psat4g057240 Pisum sativum HOM05D006711 ORTHO05D008104 8.8e-26 120.2 95 65.3
Prupe.5G177100 Prunus persica HOM05D006711 ORTHO05D008104 8.8e-26 120.2 92 67.4
arahy.Tifrunner.gnm1.ann1.5NY27E Arachis hypogaea HOM05D006711 ORTHO05D008104 1.2e-25 119.8 93 67.7
vmacro05808 Vaccinium macrocarpon HOM05D006711 ORTHO05D008104 2.0e-25 119.0 88 72.7
Sc04g0001970 Simmondsia chinensis HOM05D006711 ORTHO05D008104 2.6e-25 118.6 88 73.9
Sed0004980 Sechium edule HOM05D006711 ORTHO05D008104 4.4e-25 117.9 91 68.1
AUR62031000 Chenopodium quinoa HOM05D006711 ORTHO05D008104 5.7e-25 117.5 89 70.8
EL10Ac5g10797 Beta vulgaris HOM05D006711 ORTHO05D008104 7.5e-25 117.1 88 72.7
Ah.10g035450 Amaranthus hybridus HOM05D006711 ORTHO05D008104 9.7e-25 116.7 89 71.9
PSO478G1559 Papaver somniferum HOM05D006711 ORTHO05D008104 1.3e-24 116.3 88 70.5
Cc07_g02450 Coffea canephora HOM05D006711 ORTHO05D008104 1.7e-24 115.9 88 72.7
Glyma.05G035600 Glycine max HOM05D006711 ORTHO05D008104 1.7e-24 115.9 83 74.7
Oeu059193.1 Olea europaea HOM05D006711 ORTHO05D008104 2.2e-24 115.5 88 71.6
Phvul.003G198200 Phaseolus vulgaris HOM05D006711 ORTHO05D008104 3.7e-24 114.8 83 73.5
PSO017G6527 Papaver somniferum HOM05D006711 ORTHO05D008104 6.3e-24 114.0 88 70.5
GSVIVG01032507001 Vitis vinifera HOM05D006711 ORTHO05D008104 6.3e-24 114.0 88 69.3
Oeu006591.3 Olea europaea HOM05D006711 ORTHO05D008104 1.1e-23 113.2 100 65.0
PSO063G1690 Papaver somniferum HOM05D006711 ORTHO05D008104 1.4e-23 112.8 89 65.2
PSO832G1815 Papaver somniferum HOM05D006711 ORTHO05D008104 1.4e-23 112.8 89 65.2
Aqoxy3G00948 Aquilegia oxysepala HOM05D006711 ORTHO05D008104 1.8e-23 112.5 89 68.5
SalBow6G5258 Salvia bowleyana HOM05D006711 ORTHO05D008104 1.8e-23 112.5 88 69.3
Oeu047317.1 Olea europaea HOM05D006711 ORTHO05D008104 2.4e-23 112.1 88 68.2
DCAR_011220 Daucus carota HOM05D006711 ORTHO05D008104 3.1e-23 111.7 88 68.2
Hma1.2p1_0697F.1_g204840 Hydrangea macrophylla HOM05D006711 ORTHO05D008104 3.1e-23 111.7 88 68.2
QL10p013547 Quercus lobata HOM05D006711 ORTHO05D008104 3.1e-23 111.7 152 44.1
HPP92_010905 Vanilla planifolia HOM05D006711 ORTHO05D008104 4.1e-23 111.3 95 64.2
HPP92_010907 Vanilla planifolia HOM05D006711 ORTHO05D008104 4.1e-23 111.3 95 64.2
CDE10G0118 Ceratophyllum demersum HOM05D001322 ORTHO05D001301 1.2e-22 109.8 82 72.0
Migut.N03365 Erythranthe guttata HOM05D006711 ORTHO05D008104 1.2e-22 109.8 88 65.9
MBI15_g24174_MAGBIO Magnolia biondii HOM05D006711 ORTHO05D008104 1.2e-22 109.8 81 71.6
GSVIVG01007800001 Vitis vinifera HOM05D006711 ORTHO05D008104 1.6e-22 109.4 81 70.4
Sed0016611 Sechium edule HOM05D006711 ORTHO05D008104 2.0e-22 109.0 93 61.3
CDE10G0426 Ceratophyllum demersum HOM05D006711 ORTHO05D008104 2.7e-22 108.6 82 70.7
Actinidia33966 Actinidia chinensis HOM05D006711 ORTHO05D008104 3.5e-22 108.2 88 65.9
HanXRQChr09g0265981 Helianthus annuus HOM05D006711 ORTHO05D008104 4.5e-22 107.8 85 69.4
unitig_46.g17997 Utricularia gibba HOM05D006711 ORTHO05D008104 4.5e-22 107.8 95 63.2
Lsat_1_v5_gn_4_181601 Lactuca sativa HOM05D006711 ORTHO05D008104 1.0e-21 106.7 85 69.4
Peaxi162Scf00429g00118 Petunia axillaris HOM05D006711 ORTHO05D008104 1.3e-21 106.3 89 60.7
ATR1149G012 Amborella trichopoda HOM05D006711 ORTHO05D008104 1.7e-21 105.9 88 68.2
Nitab4.5_0002792g0010 Nicotiana tabacum HOM05D006711 ORTHO05D008104 1.7e-21 105.9 95 60.0
CiPaw.11G029900 Carya illinoinensis HOM05D006711 ORTHO05D008104 2.9e-21 105.1 79 73.4
AUR62008246 Chenopodium quinoa HOM05D001451 ORTHO05D008104 1.1e-20 103.2 80 71.2
Nitab4.5_0004762g0010 Nicotiana tabacum HOM05D006711 ORTHO05D008104 1.1e-20 103.2 89 60.7
Sopen11g029530 Solanum pennellii HOM05D006711 ORTHO05D008104 1.5e-20 102.8 89 59.6
Haze_07479 Corylus avellana HOM05D006711 ORTHO05D008104 1.9e-20 102.4 64 79.7
RcHm_v2.0_Chr7g0194021 Rosa chinensis HOM05D006711 ORTHO05D008104 2.5e-20 102.1 63 76.2
CAN.G742.33 Capsicum annuum HOM05D006711 ORTHO05D008104 9.4e-20 100.1 89 58.4
Carub.0005s1414 Capsella rubella HOM05D000086 ORTHO05D008104 1.6e-19 99.4 80 67.5
Zm00001eb311470 Zea mays HOM05D006711 ORTHO05D008104 2.7e-19 98.6 76 72.4
Os09g0375900 Oryza sativa ssp. japonica HOM05D006711 ORTHO05D008104 6.1e-19 97.4 80 68.8
HanXRQChr12g0385511 Helianthus annuus HOM05D006711 ORTHO05D008104 2.3e-18 95.5 88 60.2
Rhsim10G0024900 Rhododendron simsii HOM05D006711 ORTHO05D008104 2.3e-18 95.5 151 43.7
PGSC0003DMG400003004 Solanum tuberosum HOM05D006711 ORTHO05D008104 4.0e-18 94.7 122 44.3
Rhsim10G0024700 Rhododendron simsii HOM05D006711 ORTHO05D008104 9.8e-17 90.1 59 78.0
Lalb_Chr12g0201501 Lupinus albus HOM05D006711 ORTHO05D008104 1.7e-16 89.4 79 62.0
Eucgr.J02179 Eucalyptus grandis HOM05D006711 ORTHO05D008104 2.2e-16 89.0 87 56.3
TAR622G0690 Trochodendron aralioides HOM05D001464 ORTHO05D002836 4.8e-16 87.8 89 56.2
Nn4g22854 Nelumbo nucifera HOM05D006711 ORTHO05D008104 3.1e-15 85.1 72 65.3
CSS0024346 Camellia sinensis var. sinensis HOM05D006711 ORTHO05D008104 4.1e-15 84.7 56 76.8
Rhsim08G0056600 Rhododendron simsii HOM05D000086 ORTHO05D000983 1.6e-14 82.8 90 56.7
CBR_g49624 Chara braunii HOM05D006711 ORTHO05D008104 6.5e-13 77.4 77 59.7
SEGI_30617 Sequoiadendron giganteum HOM05D006711 ORTHO05D008104 6.5e-13 77.4 81 51.9
Mapoly0124s0028 Marchantia polymorpha HOM05D006711 ORTHO05D008104 1.6e-11 72.8 79 55.7
Pp3c14_16830 Physcomitrium patens HOM05D006711 ORTHO05D008104 1.6e-11 72.8 83 50.6
ATR0661G003 Amborella trichopoda HOM05D006711 ORTHO05D008104 8.0e-11 70.5 80 56.2
ATR0820G148 Amborella trichopoda HOM05D006711 ORTHO05D008104 8.0e-11 70.5 79 57.0
Pp3c3_16770 Physcomitrium patens HOM05D006711 ORTHO05D008104 1.2e-09 66.6 74 55.4
AagrBONN_evm.TU.Sc2ySwM_368.1224 Anthoceros agrestis HOM05D006711 ORTHO05D008104 2.0e-09 65.9 74 55.4
PRCOL_00004863 Prasinoderma coloniale HOM05D006711 ORTHO05D008104 2.6e-09 65.5 85 47.1
Dinv35040 Davidia involucrata HOM05D006711 ORTHO05D008104 8.3e-08 60.5 36 88.9
HPP92_016979 Vanilla planifolia HOM05D006711 ORTHO05D008104 1.8e-07 59.3 35 82.9


User provided reference genes

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