Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.12G009100 Carya illinoinensis HOM05D004908 ORTHO05D006418 2.5e-192 675.2 341 100.0
Cfa019355 Carpinus fangiana HOM05D004908 ORTHO05D006418 6.6e-148 527.7 341 80.1
Haze_07746 Corylus avellana HOM05D004908 ORTHO05D006418 7.0e-142 507.7 370 73.0
QL10p019966 Quercus lobata HOM05D004908 ORTHO05D006418 3.4e-136 488.8 350 75.4
Prupe.5G207300 Prunus persica HOM05D004908 ORTHO05D006418 5.2e-121 438.3 350 68.0
MD14G1214000 Malus domestica HOM05D004908 ORTHO05D006418 6.2e-114 414.8 351 64.7
RcHm_v2.0_Chr7g0183321 Rosa chinensis HOM05D004908 ORTHO05D006418 1.5e-112 410.2 343 62.7
Dinv17436 Davidia involucrata HOM05D004908 ORTHO05D006418 2.4e-110 402.9 347 62.0
Hma1.2p1_0060F.1_g032940 Hydrangea macrophylla HOM05D004908 ORTHO05D006418 4.6e-109 398.7 353 61.8
Thecc.03G001900 Theobroma cacao HOM05D004908 ORTHO05D006418 1.3e-108 397.1 347 63.4
FvH4_5g13640 Fragaria vesca HOM05D004908 ORTHO05D006418 1.5e-107 393.7 348 60.6
GSVIVG01008119001 Vitis vinifera HOM05D004908 ORTHO05D006418 1.9e-107 393.3 335 62.1
Potri.006G227300 Populus trichocarpa HOM05D004908 ORTHO05D006418 1.5e-104 383.6 343 61.8
Cc00_g03370 Coffea canephora HOM05D004908 ORTHO05D006418 1.7e-103 380.2 340 58.5
Cpa.g.sc94.75 Carica papaya HOM05D004908 ORTHO05D006418 2.9e-103 379.4 348 59.8
Gorai.008G298500 Gossypium raimondii HOM05D004908 ORTHO05D006418 8.4e-103 377.9 341 61.0
Sed0013495 Sechium edule HOM05D004908 ORTHO05D006418 1.9e-102 376.7 336 60.1
Gohir.A12G276800 Gossypium hirsutum HOM05D004908 ORTHO05D006418 1.6e-101 373.6 341 61.0
TWI81G0201 Tripterygium wilfordii HOM05D004908 ORTHO05D006418 6.7e-100 368.2 343 59.5
CsaV3_1G006120 Cucumis sativus L. HOM05D004908 ORTHO05D006418 8.7e-100 367.9 333 59.2
Eucgr.B00624 Eucalyptus grandis HOM05D004908 ORTHO05D006418 9.6e-99 364.4 347 60.2
CSS0022679 Camellia sinensis var. sinensis HOM05D004908 ORTHO05D006418 1.3e-98 364.0 346 57.8
ClCG04G011680 Citrullus lanatus HOM05D004908 ORTHO05D006418 1.6e-98 363.6 345 58.3
Manes.14G087300 Manihot esculenta HOM05D004908 ORTHO05D006418 1.6e-98 363.6 351 58.4
Sabra06G0175900 Salix brachista HOM05D004908 ORTHO05D006418 3.7e-98 362.5 343 60.1
Prupe.5G207200 Prunus persica HOM05D004908 ORTHO05D006418 6.2e-98 361.7 348 57.8
Atru.chr9.517 Acer truncatum HOM05D004908 ORTHO05D006418 2.4e-97 359.8 352 58.0
TAR371G0785 Trochodendron aralioides HOM05D004908 ORTHO05D006418 2.6e-96 356.3 342 58.8
Duzib068G0428 Durio zibethinus HOM05D004908 ORTHO05D006418 5.8e-96 355.1 347 58.2
CANSAT80G1354 Cannabis sativa HOM05D004908 ORTHO05D006418 4.6e-93 345.5 344 54.9
Gohir.D12G277800 Gossypium hirsutum HOM05D004908 ORTHO05D006418 1.3e-92 344.0 244 70.9
MSTRG.9592 Avicennia marina HOM05D004908 ORTHO05D006418 1.8e-92 343.6 350 54.6
Ciclev10021158m.g Citrus clementina HOM05D004908 ORTHO05D006418 5.1e-92 342.0 345 57.1
Rhsim08G0143800 Rhododendron simsii HOM05D004908 ORTHO05D006418 6.7e-92 341.7 389 52.2
Thhalv10008142m.g Eutrema salsugineum HOM05D004908 ORTHO05D006418 1.9e-91 340.1 240 70.8
Nn4g23471 Nelumbo nucifera HOM05D004908 ORTHO05D006418 2.5e-91 339.7 347 53.6
Glyma.05G019500 Glycine max HOM05D004908 ORTHO05D006418 7.4e-91 338.2 346 57.8
AL1G31040 Arabidopsis lyrata HOM05D004908 ORTHO05D006418 9.6e-91 337.8 240 70.8
Oeu032097.2 Olea europaea HOM05D004908 ORTHO05D006418 9.6e-91 337.8 376 52.9
CARHR019220 Cardamine hirsuta HOM05D004908 ORTHO05D006418 8.2e-90 334.7 240 70.4
AT1G18600 Arabidopsis thaliana HOM05D004908 ORTHO05D006418 2.4e-89 333.2 240 69.6
Carub.0001s1823 Capsella rubella HOM05D004908 ORTHO05D006418 4.1e-89 332.4 277 61.7
Sp1g16570 Schrenkiella parvula HOM05D004908 ORTHO05D006418 5.3e-89 332.0 238 70.2
Lsat_1_v5_gn_5_22901 Lactuca sativa HOM05D004908 ORTHO05D006418 6.9e-89 331.6 351 55.0
SGA_v2.0_scaffold51G18774 Striga asiatica HOM05D004908 ORTHO05D006418 9.0e-89 331.3 360 52.5
Lj9C439G11 Lonicera japonica HOM05D004908 ORTHO05D006418 1.2e-88 330.9 211 75.8
BcaB07g31879 Brassica carinata HOM05D004908 ORTHO05D006418 2.6e-88 329.7 240 68.3
A06p14680 Brassica napus HOM05D004908 ORTHO05D006418 4.5e-88 328.9 336 55.7
BraA06t24593Z Brassica rapa HOM05D004908 ORTHO05D006418 4.5e-88 328.9 336 55.7
BolC5t30387H Brassica oleracea HOM05D004908 ORTHO05D006418 5.9e-88 328.6 240 69.6
Phvul.003G183300 Phaseolus vulgaris HOM05D004908 ORTHO05D006418 1.7e-87 327.0 326 57.4
Hund02570 Selenicereus undatus HOM05D004908 ORTHO05D006418 5.0e-87 325.5 337 54.6
BcaC05g25755 Brassica carinata HOM05D004908 ORTHO05D006418 1.1e-86 324.3 304 59.5
C05p16860 Brassica napus HOM05D004908 ORTHO05D006418 1.1e-86 324.3 304 59.5
FAN13G1921 Fragaria x ananassa HOM05D004908 ORTHO05D006418 1.4e-86 323.9 342 53.5
THA.LOC104808039 Tarenaya hassleriana HOM05D004908 ORTHO05D006418 1.4e-86 323.9 332 56.6
Aa31LG7G3360 Aethionema arabicum HOM05D004908 ORTHO05D006418 1.9e-86 323.6 340 54.1
HanXRQChr05g0153521 Helianthus annuus HOM05D004908 ORTHO05D006418 2.1e-85 320.1 296 58.4
Sopen12g018880 Solanum pennellii HOM05D004908 ORTHO05D006418 2.7e-85 319.7 343 54.2
VMungo1215G2693 Vigna mungo HOM05D004908 ORTHO05D006418 7.9e-85 318.2 316 56.3
MELO3C002041.2 Cucumis melo HOM05D004908 ORTHO05D006418 5.1e-84 315.5 315 54.9
FAN08G1663 Fragaria x ananassa HOM05D004908 ORTHO05D006418 1.5e-83 313.9 344 51.7
Ah.11g047620 Amaranthus hybridus HOM05D004908 ORTHO05D006418 1.9e-83 313.5 338 50.9
Aqoxy3G03654 Aquilegia oxysepala HOM05D004908 ORTHO05D006418 3.3e-83 312.8 333 52.9
Peaxi162Scf01223g00009 Petunia axillaris HOM05D004908 ORTHO05D006418 5.7e-83 312.0 345 52.2
Migut.D01626 Erythranthe guttata HOM05D004908 ORTHO05D006418 9.7e-83 311.2 302 55.6
TPR.G1983 Trifolium pratense HOM05D004908 ORTHO05D006418 1.3e-82 310.8 231 68.0
Lalb_Chr07g0178341 Lupinus albus HOM05D004908 ORTHO05D006418 2.8e-82 309.7 321 56.4
Manes.14G087101 Manihot esculenta HOM05D004908 ORTHO05D006418 3.1e-81 306.2 349 50.7
AUR62039652 Chenopodium quinoa HOM05D004908 ORTHO05D006418 1.5e-80 303.9 344 51.2
arahy.Tifrunner.gnm1.ann1.PAN20U Arachis hypogaea HOM05D004908 ORTHO05D006418 7.7e-80 301.6 350 52.0
arahy.Tifrunner.gnm1.ann1.J6BFMQ Arachis hypogaea HOM05D004908 ORTHO05D006418 1.0e-79 301.2 350 52.0
Nitab4.5_0001797g0080 Nicotiana tabacum HOM05D004908 ORTHO05D006418 1.3e-79 300.8 358 48.9
ECA246G3883 Erigeron canadensis HOM05D004908 ORTHO05D006418 1.7e-79 300.4 216 70.4
FAN18G1888 Fragaria x ananassa HOM05D004908 ORTHO05D006418 1.4e-78 297.4 343 48.7
Lj4g0028183 Lotus japonicus HOM05D004908 ORTHO05D006418 1.9e-78 297.0 331 54.7
Medtr4g109700 Medicago truncatula HOM05D004908 ORTHO05D006418 3.2e-78 296.2 281 56.2
AUR62021531 Chenopodium quinoa HOM05D004908 ORTHO05D006418 4.2e-78 295.8 345 50.4
FAN08G0411 Fragaria x ananassa HOM05D004908 ORTHO05D006418 1.8e-76 290.4 338 50.9
Duzib205G0531 Durio zibethinus HOM05D004908 ORTHO05D006418 3.9e-76 289.3 344 48.5
FAN13G3071 Fragaria x ananassa HOM05D004908 ORTHO05D006418 2.0e-75 287.0 343 47.5
MBI16_g10851_MAGBIO Magnolia biondii HOM05D004908 ORTHO05D006418 3.3e-75 286.2 333 51.4
EL10Ac5g11159 Beta vulgaris HOM05D004908 ORTHO05D006418 1.3e-74 284.3 209 66.0
PSO478G4625 Papaver somniferum HOM05D004908 ORTHO05D006418 4.5e-72 275.8 232 60.8
Sc04g0004310 Simmondsia chinensis HOM05D004908 ORTHO05D006418 7.2e-70 268.5 340 47.1
unitig_699.g19027 Utricularia gibba HOM05D004908 ORTHO05D006418 6.1e-69 265.4 196 65.3
Nitab4.5_0006506g0020 Nicotiana tabacum HOM05D004908 ORTHO05D006418 3.0e-68 263.1 213 62.9
SalBow7G1843 Salvia bowleyana HOM05D004908 ORTHO05D006418 4.8e-66 255.8 247 54.3
SHI17490 Sapria himalayana HOM05D004908 ORTHO05D006418 4.8e-66 255.8 206 63.1
DCAR_011562 Daucus carota HOM05D004908 ORTHO05D006418 5.3e-65 252.3 262 56.5
Prupe.3G124800 Prunus persica HOM05D004908 ORTHO05D006418 1.6e-64 250.8 354 46.9
PSO017G5063 Papaver somniferum HOM05D004908 ORTHO05D006418 2.2e-63 246.9 342 45.0
PSO017G6704 Papaver somniferum HOM05D004908 ORTHO05D006418 6.5e-63 245.4 342 44.7
Os01g0763100 Oryza sativa ssp. japonica HOM05D004908 ORTHO05D006418 1.9e-62 243.8 209 58.9
vmacro17622 Vaccinium macrocarpon HOM05D004908 ORTHO05D006418 3.6e-61 239.6 211 63.0
CDE07G0469 Ceratophyllum demersum HOM05D004908 ORTHO05D006418 3.0e-60 236.5 230 53.0
PGR083G2541 Punica granatum HOM05D004908 ORTHO05D006418 3.3e-59 233.0 347 42.1
HPP92_019201 Vanilla planifolia HOM05D004908 ORTHO05D006418 5.3e-57 225.7 233 49.8
ATR0827G189 Amborella trichopoda HOM05D004908 ORTHO05D006418 2.0e-56 223.8 205 56.6
FAN13G1644 Fragaria x ananassa HOM05D004908 ORTHO05D006418 2.3e-52 210.3 207 55.6
AL2G34040 Arabidopsis lyrata HOM05D004908 ORTHO05D006418 5.2e-52 209.1 258 46.5
Zm00001eb370410 Zea mays HOM05D004908 ORTHO05D006418 1.5e-51 207.6 192 57.3
AT1G74130 Arabidopsis thaliana HOM05D004908 ORTHO05D006418 2.6e-51 206.8 257 44.4
PSO017G2617 Papaver somniferum HOM05D004908 ORTHO05D006418 1.7e-50 204.1 216 50.9
CARHR067290 Cardamine hirsuta HOM05D004908 ORTHO05D006418 4.8e-50 202.6 298 40.3
Gohir.D10G255500 Gossypium hirsutum HOM05D004908 ORTHO05D006418 4.8e-50 202.6 133 76.7
Psat0s3566g0040 Pisum sativum HOM05D004908 ORTHO05D006418 1.3e-47 194.5 214 50.5
Carub.0002s2094 Capsella rubella HOM05D004908 ORTHO05D006418 1.7e-47 194.1 259 44.8
SalBow7G4422 Salvia bowleyana HOM05D004908 ORTHO05D006418 3.8e-47 193.0 327 40.1
BraA07t31547Z Brassica rapa HOM05D003320 ORTHO05D003941 1.6e-45 187.6 292 41.1
RcHm_v2.0_Chr1g0346931 Rosa chinensis HOM05D004908 ORTHO05D006418 4.7e-45 186.0 124 76.6
Solyc12g038600.2 Solanum lycopersicum HOM05D004908 ORTHO05D006418 1.8e-44 184.1 133 70.7
Pp3c22_7870 Physcomitrium patens HOM05D004908 ORTHO05D006418 5.2e-44 182.6 206 46.1
Carub.0002s2095 Capsella rubella HOM05D004908 ORTHO05D006418 6.8e-44 182.2 248 43.5
FvH4_5g13620 Fragaria vesca HOM05D004908 ORTHO05D006418 6.8e-44 182.2 159 57.9
SalBow7G0217 Salvia bowleyana HOM05D004908 ORTHO05D006418 1.5e-43 181.0 334 38.9
A07p40020 Brassica napus HOM05D003320 ORTHO05D003941 3.4e-43 179.9 315 39.4
Thhalv10019561m.g Eutrema salsugineum HOM05D004908 ORTHO05D006418 4.4e-43 179.5 301 40.2
BcaC08g46817 Brassica carinata HOM05D004908 ORTHO05D006418 4.9e-42 176.0 317 37.5
Glyma.17G080300 Glycine max HOM05D004908 ORTHO05D006418 1.2e-40 171.4 171 57.9
Mapoly0086s0048 Marchantia polymorpha HOM05D004908 ORTHO05D006418 4.5e-40 169.5 197 48.2
AagrBONN_evm.TU.Sc2ySwM_368.1628 Anthoceros agrestis HOM05D004908 ORTHO05D006418 1.7e-39 167.5 208 44.7
BolC6t39860H Brassica oleracea HOM05D004908 ORTHO05D006418 5.0e-39 166.0 312 37.8
BcaC08g46813 Brassica carinata HOM05D004908 ORTHO05D006418 2.8e-37 160.2 311 36.0
MCO07G692 Micromonas commoda HOM05D004908 ORTHO05D006418 1.0e-36 158.3 215 40.0
C06p48280 Brassica napus HOM05D004908 ORTHO05D006418 1.4e-36 157.9 278 38.5
SalBow7G4769 Salvia bowleyana HOM05D004908 ORTHO05D006418 1.4e-36 157.9 331 37.5
BcaC08g46846 Brassica carinata HOM05D003320 ORTHO05D003941 5.2e-36 156.0 300 36.7
SEGI_05482 Sequoiadendron giganteum HOM05D004908 ORTHO05D006418 1.2e-35 154.8 143 58.7
Actinidia04812 Actinidia chinensis HOM05D004908 ORTHO05D006418 4.4e-35 152.9 218 44.0
Actinidia13428 Actinidia chinensis HOM05D004908 ORTHO05D006418 3.7e-34 149.8 101 76.2
AT1G74140 Arabidopsis thaliana HOM05D004908 ORTHO05D006418 4.9e-34 149.4 258 38.4
RcHm_v2.0_Chr6g0258631 Rosa chinensis HOM05D004908 ORTHO05D006418 1.1e-33 148.3 121 63.6
C06p48290 Brassica napus HOM05D003320 ORTHO05D003941 7.0e-33 145.6 317 33.8
Solyc12g038590.2 Solanum lycopersicum HOM05D004908 ORTHO05D006418 5.9e-32 142.5 219 42.5
RcHm_v2.0_Chr7g0183341 Rosa chinensis HOM05D004908 ORTHO05D006418 4.7e-29 132.9 114 59.6
HPP92_019191 Vanilla planifolia HOM05D004908 ORTHO05D006418 6.8e-28 129.0 139 48.9
vmacro17623 Vaccinium macrocarpon HOM05D004908 ORTHO05D006418 1.2e-27 128.3 93 69.9
RcHm_v2.0_Chr6g0258651 Rosa chinensis HOM05D004908 ORTHO05D006418 6.4e-26 122.5 76 80.3
Gohir.A06G087200 Gossypium hirsutum HOM05D004908 ORTHO05D006418 1.2e-24 118.2 82 70.7
RcHm_v2.0_Chr1g0346941 Rosa chinensis HOM05D004908 ORTHO05D006418 3.6e-21 106.7 73 65.8
Dinv17434 Davidia involucrata HOM05D004908 ORTHO05D006418 5.8e-19 99.4 88 63.6
BolC6t39863H Brassica oleracea HOM05D004908 ORTHO05D039080 3.2e-17 93.6 164 38.4
CBR_g24070 Chara braunii HOM05D000019 ORTHO05D000002 4.6e-16 89.7 101 39.6
FvH4_5g13610 Fragaria vesca HOM05D004908 ORTHO05D006418 4.6e-16 89.7 73 65.8
BcaC08g46819 Brassica carinata HOM05D004908 ORTHO05D039080 1.7e-10 71.2 90 43.3
Gohir.A07G149500 Gossypium hirsutum HOM05D004908 ORTHO05D006418 9.2e-09 65.5 43 67.4
PRCOL_00000970 Prasinoderma coloniale HOM05D049057 ORTHO05D049180 6.6e-07 59.3 174 28.7
MELO3C034996.2 Cucumis melo HOM05D004908 ORTHO05D006418 5.6e-06 56.2 39 71.8


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