Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.12G007800 Carya illinoinensis HOM05D006748 ORTHO05D008553 2.5e-53 211.8 107 100.0
Cfa019312 Carpinus fangiana HOM05D006748 ORTHO05D008553 5.2e-51 204.1 107 94.4
Haze_07696 Corylus avellana HOM05D006748 ORTHO05D008553 4.4e-50 201.1 107 93.5
Gohir.A12G181700 Gossypium hirsutum HOM05D006748 ORTHO05D008553 8.3e-49 196.8 108 94.4
Gohir.D12G184500 Gossypium hirsutum HOM05D006748 ORTHO05D008553 8.3e-49 196.8 108 94.4
Gorai.008G197900 Gossypium raimondii HOM05D006748 ORTHO05D008553 8.3e-49 196.8 108 94.4
Thecc.03G099400 Theobroma cacao HOM05D006748 ORTHO05D008553 4.1e-48 194.5 108 92.6
Duzib084G0059 Durio zibethinus HOM05D006748 ORTHO05D008553 2.1e-47 192.2 108 91.7
Dinv10524 Davidia involucrata HOM05D006748 ORTHO05D008553 2.3e-46 188.7 108 89.8
Hma1.2p1_0060F.1_g033230 Hydrangea macrophylla HOM05D006748 ORTHO05D008553 3.0e-46 188.3 109 86.2
QL10p019141 Quercus lobata HOM05D006748 ORTHO05D008553 3.0e-46 188.3 103 90.3
ClCG06G015720 Citrullus lanatus HOM05D006748 ORTHO05D008553 5.6e-45 184.1 106 87.7
Actinidia35032 Actinidia chinensis HOM05D006748 ORTHO05D008553 7.3e-45 183.7 109 85.3
Potri.015G056300 Populus trichocarpa HOM05D006748 ORTHO05D008553 1.2e-44 183.0 108 86.1
Nn3g17423 Nelumbo nucifera HOM05D006748 ORTHO05D008553 3.6e-44 181.4 107 80.4
Sed0010236 Sechium edule HOM05D006748 ORTHO05D008553 3.6e-44 181.4 101 88.1
Cpa.g.sc94.24 Carica papaya HOM05D006748 ORTHO05D008553 6.2e-44 180.6 105 85.7
TWI81G0385 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 6.2e-44 180.6 107 82.2
CANSAT80G2841 Cannabis sativa HOM05D006748 ORTHO05D008553 1.1e-43 179.9 107 81.3
TAR622G0828 Trochodendron aralioides HOM05D006748 ORTHO05D008553 1.1e-43 179.9 108 82.4
CsaV3_1G002810 Cucumis sativus L. HOM05D006748 ORTHO05D008553 3.1e-43 178.3 101 87.1
Carub.0006s0686 Capsella rubella HOM05D006748 ORTHO05D008553 4.0e-43 177.9 105 82.9
Ciclev10023002m.g Citrus clementina HOM05D006748 ORTHO05D008553 5.2e-43 177.6 107 84.1
AT5G07960 Arabidopsis thaliana HOM05D006748 ORTHO05D008553 8.9e-43 176.8 105 81.0
THA.LOC104818341 Tarenaya hassleriana HOM05D006748 ORTHO05D008553 8.9e-43 176.8 105 82.9
BcaB05g21592 Brassica carinata HOM05D006748 ORTHO05D008553 1.2e-42 176.4 105 81.0
Ca_18978_v3 Cicer arietinum L. HOM05D006748 ORTHO05D008553 1.2e-42 176.4 103 81.6
Eucgr.K02517 Eucalyptus grandis HOM05D006748 ORTHO05D008553 2.0e-42 175.6 100 84.0
Glyma.06G201800 Glycine max HOM05D006748 ORTHO05D008553 2.0e-42 175.6 101 81.2
Lj1g0012744 Lotus japonicus HOM05D006748 ORTHO05D008553 2.0e-42 175.6 107 78.5
Psat5g203080 Pisum sativum HOM05D006748 ORTHO05D008553 2.0e-42 175.6 103 80.6
CARHR205230 Cardamine hirsuta HOM05D006748 ORTHO05D008553 3.4e-42 174.9 105 81.0
PSO541G5074 Papaver somniferum HOM05D006748 ORTHO05D008553 3.4e-42 174.9 108 82.4
PSO675G4773 Papaver somniferum HOM05D006748 ORTHO05D008553 3.4e-42 174.9 108 82.4
AL6G18300 Arabidopsis lyrata HOM05D006748 ORTHO05D008553 4.4e-42 174.5 105 81.0
CSS0043022 Camellia sinensis var. sinensis HOM05D006748 ORTHO05D008553 4.4e-42 174.5 104 83.7
Lj5A105G56 Lonicera japonica HOM05D006748 ORTHO05D008553 4.4e-42 174.5 107 78.5
Manes.06G086100 Manihot esculenta HOM05D006748 ORTHO05D008553 4.4e-42 174.5 107 83.2
Phvul.009G193300 Phaseolus vulgaris HOM05D006748 ORTHO05D008553 4.4e-42 174.5 107 77.6
Sed0016176 Sechium edule HOM05D006748 ORTHO05D008553 4.4e-42 174.5 101 86.1
Potri.012G065500 Populus trichocarpa HOM05D006748 ORTHO05D008553 5.8e-42 174.1 108 80.6
Atru.chr9.414 Acer truncatum HOM05D006748 ORTHO05D008553 9.9e-42 173.3 107 83.2
TPR.G12215 Trifolium pratense HOM05D006748 ORTHO05D008553 9.9e-42 173.3 105 78.1
TWI60G0647 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 9.9e-42 173.3 107 77.6
Thhalv10015079m.g Eutrema salsugineum HOM05D006748 ORTHO05D008553 1.7e-41 172.6 105 79.0
MD14G1210100 Malus domestica HOM05D006748 ORTHO05D008553 2.2e-41 172.2 99 83.8
BcaC06g32512 Brassica carinata HOM05D006748 ORTHO05D008553 3.8e-41 171.4 105 79.0
BcaC03g13204 Brassica carinata HOM05D006748 ORTHO05D008553 8.4e-41 170.2 100 81.0
C02p03380 Brassica napus HOM05D006748 ORTHO05D008553 8.4e-41 170.2 100 81.0
BolC2t06300H Brassica oleracea HOM05D006748 ORTHO05D008553 8.4e-41 170.2 100 81.0
Medtr3g024170 Medicago truncatula HOM05D006748 ORTHO05D008553 8.4e-41 170.2 107 74.8
Medtr3g024190 Medicago truncatula HOM05D006748 ORTHO05D008553 8.4e-41 170.2 107 74.8
QL09p026979 Quercus lobata HOM05D006748 ORTHO05D008553 8.4e-41 170.2 135 68.1
C09p68960 Brassica napus HOM05D006748 ORTHO05D008553 1.1e-40 169.9 105 78.1
FvH4_5g14060 Fragaria vesca HOM05D006748 ORTHO05D008553 1.1e-40 169.9 98 84.7
BraA02t04939Z Brassica rapa HOM05D006748 ORTHO05D008553 1.9e-40 169.1 100 81.0
FvH4_5g14160 Fragaria vesca HOM05D006748 ORTHO05D008553 1.9e-40 169.1 98 84.7
Lalb_Chr16g0391551 Lupinus albus HOM05D006748 ORTHO05D008553 1.9e-40 169.1 107 75.7
Sp6g34980 Schrenkiella parvula HOM05D006748 ORTHO05D008553 3.2e-40 168.3 102 80.4
MD06G1200600 Malus domestica HOM05D006748 ORTHO05D008553 4.1e-40 167.9 99 82.8
GSVIVG01007891001 Vitis vinifera HOM05D006748 ORTHO05D008553 4.1e-40 167.9 110 80.0
BolC9t59641H Brassica oleracea HOM05D006748 ORTHO05D008553 7.1e-40 167.2 105 78.1
Lalb_Chr09g0334301 Lupinus albus HOM05D006748 ORTHO05D008553 7.1e-40 167.2 107 75.7
RcHm_v2.0_Chr7g0182761 Rosa chinensis HOM05D006748 ORTHO05D008553 7.1e-40 167.2 98 80.6
Aa31LG3G18570 Aethionema arabicum HOM05D006748 ORTHO05D008553 9.2e-40 166.8 105 78.1
FAN13G1579 Fragaria x ananassa HOM05D006748 ORTHO05D008553 9.2e-40 166.8 98 83.7
PGR044G1724 Punica granatum HOM05D006748 ORTHO05D008553 2.7e-39 165.2 105 79.0
Hund09880 Selenicereus undatus HOM05D006748 ORTHO05D008553 1.3e-38 162.9 103 79.6
Actinidia19003 Actinidia chinensis HOM05D006748 ORTHO05D008553 2.5e-37 158.7 153 59.5
Lsat_1_v5_gn_1_13560 Lactuca sativa HOM05D006748 ORTHO05D008553 5.6e-37 157.5 98 73.5
Zm00001eb057720 Zea mays HOM05D006748 ORTHO05D008553 5.6e-37 157.5 104 72.1
Oeu008258.1 Olea europaea HOM05D006748 ORTHO05D008553 2.1e-36 155.6 89 84.3
Hund02598 Selenicereus undatus HOM05D006748 ORTHO05D008553 1.1e-35 153.3 101 72.3
HanXRQChr02g0044721 Helianthus annuus HOM05D006748 ORTHO05D008553 1.4e-35 152.9 101 72.3
Os03g0756800 Oryza sativa ssp. japonica HOM05D006748 ORTHO05D008553 3.1e-35 151.8 95 71.6
SHI30118 Sapria himalayana HOM05D006748 ORTHO05D008553 1.5e-34 149.4 92 78.3
unitig_750.g28509 Utricularia gibba HOM05D006748 ORTHO05D008553 2.6e-34 148.7 99 74.7
Cc10_g05660 Coffea canephora HOM05D006748 ORTHO05D008553 5.8e-34 147.5 98 76.5
Solyc06g069520.3 Solanum lycopersicum HOM05D006748 ORTHO05D008553 7.6e-34 147.1 99 73.7
Sopen06g026810 Solanum pennellii HOM05D006748 ORTHO05D008553 7.6e-34 147.1 99 73.7
Peaxi162Scf00702g00422 Petunia axillaris HOM05D006748 ORTHO05D008553 9.9e-34 146.7 92 79.3
Nitab4.5_0005160g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 1.7e-33 146.0 92 78.3
Nitab4.5_0011867g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 1.7e-33 146.0 92 78.3
MSTRG.22979 Avicennia marina HOM05D006748 ORTHO05D008553 2.2e-33 145.6 89 80.9
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 4.9e-33 144.4 110 70.0
EL10Ac5g11112 Beta vulgaris HOM05D006748 ORTHO05D008553 4.9e-33 144.4 94 78.7
ECA247G1600 Erigeron canadensis HOM05D006748 ORTHO05D008553 4.9e-33 144.4 101 67.3
Migut.I00325 Erythranthe guttata HOM05D006748 ORTHO05D008553 4.9e-33 144.4 89 79.8
HPP92_019473 Vanilla planifolia HOM05D006748 ORTHO05D008553 6.4e-33 144.1 91 74.7
Sc12g0006600 Simmondsia chinensis HOM05D006748 ORTHO05D008553 1.9e-32 142.5 87 83.9
vmacro16507 Vaccinium macrocarpon HOM05D006748 ORTHO05D008553 4.2e-32 141.4 88 80.7
SGA_v2.0_scaffold49G18162 Striga asiatica HOM05D006748 ORTHO05D008553 7.1e-32 140.6 88 76.1
Manes.14G084550 Manihot esculenta HOM05D006748 ORTHO05D008553 1.2e-31 139.8 87 80.5
VMungo1309G2295 Vigna mungo HOM05D006748 ORTHO05D008553 4.6e-31 137.9 86 77.9
Rhsim12G0151700 Rhododendron simsii HOM05D006748 ORTHO05D008553 1.0e-30 136.7 88 79.5
arahy.Tifrunner.gnm1.ann1.HPW464 Arachis hypogaea HOM05D006748 ORTHO05D008553 1.1e-29 133.3 85 76.5
CDE05G0122 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 3.6e-28 128.3 101 64.4
Mapoly0019s0070 Marchantia polymorpha HOM05D006748 ORTHO05D008553 8.1e-28 127.1 89 65.2
SMO201G0125 Selaginella moellendorffii HOM05D006748 ORTHO05D008553 1.8e-27 125.9 91 63.7
HPP92_006054 Vanilla planifolia HOM05D006748 ORTHO05D008553 9.0e-27 123.6 90 65.6
SGA_v2.0_scaffold25G10944 Striga asiatica HOM05D006748 ORTHO05D008553 2.0e-26 122.5 90 70.0
Sabra15G0081500 Salix brachista HOM05D006748 ORTHO05D008553 5.8e-26 120.9 87 71.3
Pp3c14_26790 Physcomitrium patens HOM05D006748 ORTHO05D008553 9.3e-24 113.6 89 60.7
ATR0064G062 Amborella trichopoda HOM05D006748 ORTHO05D008553 1.6e-23 112.8 74 73.0
CBR_g90015 Chara braunii HOM05D006748 ORTHO05D008553 2.1e-23 112.5 92 58.7
AUR62008510 Chenopodium quinoa HOM05D006748 ORTHO05D008553 4.6e-23 111.3 81 70.4
AUR62021580 Chenopodium quinoa HOM05D006748 ORTHO05D008553 1.3e-22 109.8 77 72.7
MELO3C017217.2 Cucumis melo HOM05D006748 ORTHO05D008553 1.1e-21 106.7 56 92.9
HanXRQChr16g0510351 Helianthus annuus HOM05D006748 ORTHO05D008553 1.6e-20 102.8 70 70.0
BraA10t44914Z Brassica rapa HOM05D006748 ORTHO05D008553 2.8e-20 102.1 58 82.8
A10p28650 Brassica napus HOM05D006748 ORTHO05D008553 1.5e-18 96.3 55 81.8
AagrBONN_evm.TU.Sc2ySwM_117.1931 Anthoceros agrestis HOM05D006748 ORTHO05D008553 3.4e-18 95.1 97 53.6
COL.COLO4_37587 Corchorus olitorius HOM05D006748 ORTHO05D008553 6.0e-15 84.3 53 81.1
HanXRQChr14g0449601 Helianthus annuus HOM05D006748 ORTHO05D008553 1.8e-14 82.8 58 69.0
CDE02G4382 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 1.9e-08 62.8 52 57.7
SEGI_29622 Sequoiadendron giganteum HOM05D006748 ORTHO05D008553 4.2e-08 61.6 51 60.8


User provided reference genes

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