Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.12G000800 Carya illinoinensis HOM05D005199 ORTHO05D006277 1.8e-210 735.7 386 100.0
Cfa018703 Carpinus fangiana HOM05D005199 ORTHO05D006277 2.5e-175 619.0 391 83.1
QL10p000401 Quercus lobata HOM05D005199 ORTHO05D006277 1.3e-173 613.2 389 83.3
Potri.015G106900 Populus trichocarpa HOM05D005199 ORTHO05D006277 9.0e-170 600.5 390 78.2
Sabra15G0129500 Salix brachista HOM05D005199 ORTHO05D006277 2.6e-169 599.0 389 78.7
Sabra15G0127400 Salix brachista HOM05D005199 ORTHO05D006277 5.9e-169 597.8 389 78.4
Haze_07093 Corylus avellana HOM05D005199 ORTHO05D006277 3.8e-168 595.1 391 83.6
Manes.06G127100 Manihot esculenta HOM05D005199 ORTHO05D006277 2.2e-163 579.3 389 80.5
TWI39G0590 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 2.4e-162 575.9 382 79.6
Ciclev10033942m.g Citrus clementina HOM05D005199 ORTHO05D006277 5.3e-162 574.7 396 77.3
MD06G1129500 Malus domestica HOM05D005199 ORTHO05D006277 2.6e-161 572.4 411 75.9
Cc04_g05820 Coffea canephora HOM05D005199 ORTHO05D006277 2.5e-159 565.8 399 77.9
Dinv13715 Davidia involucrata HOM05D005199 ORTHO05D006277 4.2e-159 565.1 397 79.1
Medtr3g098560 Medicago truncatula HOM05D005199 ORTHO05D006277 5.5e-159 564.7 393 79.1
GSVIVG01008655001 Vitis vinifera HOM05D005199 ORTHO05D006277 2.7e-158 562.4 397 75.6
Ca_10877_v3 Cicer arietinum L. HOM05D005199 ORTHO05D006277 6.1e-158 561.2 396 79.0
Nn3g16267 Nelumbo nucifera HOM05D005199 ORTHO05D006277 5.1e-157 558.1 378 81.2
Psat5g056040 Pisum sativum HOM05D005199 ORTHO05D006277 5.1e-157 558.1 396 78.5
Prupe.5G140700 Prunus persica HOM05D005199 ORTHO05D006277 5.1e-157 558.1 416 74.0
Thecc.03G141200 Theobroma cacao HOM05D005199 ORTHO05D006277 5.1e-157 558.1 396 76.8
MD14G1146700 Malus domestica HOM05D005199 ORTHO05D006277 8.2e-155 550.8 412 75.2
SalBow7G2845 Salvia bowleyana HOM05D005199 ORTHO05D006277 2.4e-154 549.3 393 76.1
Lj1g0022547 Lotus japonicus HOM05D005199 ORTHO05D006277 1.5e-153 546.6 400 77.8
Atru.chr6.1926 Acer truncatum HOM05D005199 ORTHO05D006277 5.9e-153 544.7 391 77.7
Duzib205G1536 Durio zibethinus HOM05D005199 ORTHO05D006277 5.9e-153 544.7 402 73.1
VMungo1309G0841 Vigna mungo HOM05D005199 ORTHO05D006277 1.0e-152 543.9 402 77.6
Peaxi162Scf00314g00633 Petunia axillaris HOM05D005199 ORTHO05D006277 2.9e-152 542.3 410 73.2
CSS0050347 Camellia sinensis var. sinensis HOM05D005199 ORTHO05D006277 3.8e-152 542.0 397 76.3
SGA_v2.0_scaffold37G14675 Striga asiatica HOM05D005199 ORTHO05D006277 2.5e-151 539.3 400 75.2
Rhsim08G0198200 Rhododendron simsii HOM05D005199 ORTHO05D006277 3.2e-151 538.9 401 74.1
Manes.14G044200 Manihot esculenta HOM05D005199 ORTHO05D006277 1.2e-150 537.0 382 76.2
CAN.G843.7 Capsicum annuum HOM05D005199 ORTHO05D006277 3.6e-150 535.4 422 71.3
Dinv23231 Davidia involucrata HOM05D005199 ORTHO05D006277 6.1e-150 534.6 393 76.6
TAR374G0192 Trochodendron aralioides HOM05D005199 ORTHO05D006277 6.1e-150 534.6 369 79.7
SHI14097 Sapria himalayana HOM05D005199 ORTHO05D006277 1.0e-149 533.9 436 64.2
Oeu013661.1 Olea europaea HOM05D005199 ORTHO05D006277 1.4e-149 533.5 390 75.4
Glyma.06G163600 Glycine max HOM05D005199 ORTHO05D006277 3.0e-149 532.3 410 71.7
TWI14G0958 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 3.0e-149 532.3 386 73.8
Hma1.2p1_0577F.1_g182220 Hydrangea macrophylla HOM05D005199 ORTHO05D006277 5.2e-149 531.6 377 77.7
Sopen03g037080 Solanum pennellii HOM05D005199 ORTHO05D006277 6.7e-149 531.2 410 74.1
Gohir.A07G046500 Gossypium hirsutum HOM05D005199 ORTHO05D006277 7.4e-148 527.7 407 73.5
Migut.I00669 Erythranthe guttata HOM05D005199 ORTHO05D006277 2.8e-147 525.8 406 73.9
Nitab4.5_0000976g0090 Nicotiana tabacum HOM05D005199 ORTHO05D006277 6.3e-147 524.6 420 69.3
vmacro19190 Vaccinium macrocarpon HOM05D005199 ORTHO05D006277 1.4e-146 523.5 397 75.3
Actinidia25514 Actinidia chinensis HOM05D005199 ORTHO05D006277 7.7e-145 517.7 386 74.4
Phvul.009G160900 Phaseolus vulgaris HOM05D005199 ORTHO05D006277 1.3e-144 516.9 405 73.8
Nitab4.5_0011600g0020 Nicotiana tabacum HOM05D005199 ORTHO05D006277 2.9e-144 515.8 395 70.6
FAN13G0330 Fragaria x ananassa HOM05D005199 ORTHO05D006277 7.2e-143 511.1 412 67.7
RcHm_v2.0_Chr7g0188591 Rosa chinensis HOM05D005199 ORTHO05D006277 9.4e-143 510.8 416 67.5
Cpa.g.sc13.181 Carica papaya HOM05D005199 ORTHO05D006277 1.6e-142 510.0 387 70.8
ECA232G4131 Erigeron canadensis HOM05D005199 ORTHO05D006277 1.4e-141 506.9 408 65.2
Duzib084G1266 Durio zibethinus HOM05D005199 ORTHO05D006277 1.8e-141 506.5 396 68.7
HanXRQChr09g0273821 Helianthus annuus HOM05D005199 ORTHO05D006277 6.7e-141 504.6 407 69.0
FAN08G3145 Fragaria x ananassa HOM05D005199 ORTHO05D006277 2.0e-140 503.1 408 67.4
Gohir.D07G050800 Gossypium hirsutum HOM05D005199 ORTHO05D006277 3.3e-140 502.3 407 71.7
CDE02G3820 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 4.4e-140 501.9 378 67.2
FAN04G2629 Fragaria x ananassa HOM05D005199 ORTHO05D006277 7.5e-140 501.1 417 65.7
FAN18G4150 Fragaria x ananassa HOM05D005199 ORTHO05D006277 3.7e-139 498.8 415 66.0
CDE06G1181 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 1.1e-138 497.3 378 66.9
Gorai.001G053900 Gossypium raimondii HOM05D005199 ORTHO05D006277 5.9e-137 491.5 407 71.0
arahy.Tifrunner.gnm1.ann1.4TKD14 Arachis hypogaea HOM05D005199 ORTHO05D006277 1.5e-135 486.9 431 63.6
COL.COLO4_37264 Corchorus olitorius HOM05D005199 ORTHO05D006277 5.2e-133 478.4 398 69.3
MELO3C026157.2 Cucumis melo HOM05D005199 ORTHO05D006277 5.2e-133 478.4 399 66.9
arahy.Tifrunner.gnm1.ann1.P6GRAY Arachis hypogaea HOM05D005199 ORTHO05D006277 1.5e-132 476.9 424 62.7
CsaV3_1G000050 Cucumis sativus L. HOM05D005199 ORTHO05D006277 4.4e-132 475.3 400 66.8
DCAR_025645 Daucus carota HOM05D005199 ORTHO05D006277 4.4e-132 475.3 398 65.8
Lj9A487G53 Lonicera japonica HOM05D005199 ORTHO05D006277 2.2e-131 473.0 355 70.1
Lsat_1_v5_gn_4_84380 Lactuca sativa HOM05D005199 ORTHO05D006277 4.8e-131 471.9 427 63.9
ClCG06G018380 Citrullus lanatus HOM05D005199 ORTHO05D006277 6.3e-131 471.5 369 71.3
DCAR_016338 Daucus carota HOM05D005199 ORTHO05D006277 3.5e-129 465.7 385 64.7
PGR102G3000 Punica granatum HOM05D005199 ORTHO05D006277 7.7e-129 464.5 382 67.5
BcaC01g02441 Brassica carinata HOM05D005199 ORTHO05D006277 1.7e-128 463.4 405 61.7
THA.LOC104818285 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 5.0e-128 461.8 407 63.4
THA.LOC104801769 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 6.5e-128 461.5 379 66.2
Aa31LG11G1640 Aethionema arabicum HOM05D005199 ORTHO05D006277 3.2e-127 459.1 410 63.7
C03p65260 Brassica napus HOM05D005199 ORTHO05D006277 9.5e-127 457.6 409 61.1
BolC3t18779H Brassica oleracea HOM05D005199 ORTHO05D006277 9.5e-127 457.6 409 61.1
A06p28520 Brassica napus HOM05D005199 ORTHO05D006277 1.6e-126 456.8 409 61.4
BraA06t25798Z Brassica rapa HOM05D005199 ORTHO05D006277 1.6e-126 456.8 409 61.4
Sp2g25050 Schrenkiella parvula HOM05D005199 ORTHO05D006277 1.5e-124 450.3 411 63.0
MBI10_g44970_MAGBIO Magnolia biondii HOM05D005199 ORTHO05D006277 9.8e-124 447.6 370 68.9
TPR.G25958 Trifolium pratense HOM05D005199 ORTHO05D006277 9.8e-124 447.6 331 75.8
AUR62032216 Chenopodium quinoa HOM05D005199 ORTHO05D006277 4.9e-123 445.3 356 66.0
Thhalv10005606m.g Eutrema salsugineum HOM05D005199 ORTHO05D006277 8.3e-123 444.5 399 61.9
AT5G61850 Arabidopsis thaliana HOM05D005199 ORTHO05D006277 1.1e-122 444.1 411 63.0
BcaB02g09607 Brassica carinata HOM05D005199 ORTHO05D006277 1.8e-122 443.4 395 62.3
Carub.0008s2255 Capsella rubella HOM05D005199 ORTHO05D006277 5.4e-122 441.8 403 63.0
Eucgr.K02192 Eucalyptus grandis HOM05D005199 ORTHO05D006277 7.0e-122 441.4 324 72.2
unitig_0.g1099 Utricularia gibba HOM05D005199 ORTHO05D006277 7.0e-122 441.4 311 75.6
A02p41740 Brassica napus HOM05D005199 ORTHO05D006277 3.5e-121 439.1 401 63.8
CARHR275620 Cardamine hirsuta HOM05D005199 ORTHO05D006277 3.5e-121 439.1 400 64.0
BcaB07g29818 Brassica carinata HOM05D005199 ORTHO05D006277 1.7e-120 436.8 405 61.7
BcaC03g18101 Brassica carinata HOM05D005199 ORTHO05D006277 8.6e-120 434.5 398 63.1
C02p61660 Brassica napus HOM05D005199 ORTHO05D006277 8.6e-120 434.5 398 63.1
BraA02t09114Z Brassica rapa HOM05D005199 ORTHO05D006277 1.9e-119 433.3 405 63.2
EL10Ac5g11279 Beta vulgaris HOM05D005199 ORTHO05D006277 4.3e-119 432.2 517 52.4
FAN11G0489 Fragaria x ananassa HOM05D005199 ORTHO05D006277 2.1e-118 429.9 399 61.9
Sed0007314 Sechium edule HOM05D005199 ORTHO05D006277 3.6e-118 429.1 358 65.6
Sc22g0003300 Simmondsia chinensis HOM05D005199 ORTHO05D006277 3.6e-118 429.1 474 56.5
BolC2t12224H Brassica oleracea HOM05D005199 ORTHO05D006277 4.7e-118 428.7 402 62.4
arahy.Tifrunner.gnm1.ann1.33WSUR Arachis hypogaea HOM05D005199 ORTHO05D006277 8.0e-118 427.9 375 65.1
FvH4_3g03530 Fragaria vesca HOM05D005199 ORTHO05D006277 1.4e-117 427.2 399 61.9
PSO478G1920 Papaver somniferum HOM05D005199 ORTHO05D006277 1.4e-117 427.2 421 58.7
FvH4_3g04170 Fragaria vesca HOM05D005199 ORTHO05D006277 2.3e-117 426.4 399 63.7
AL8G38620 Arabidopsis lyrata HOM05D005199 ORTHO05D006277 3.0e-117 426.0 408 61.5
arahy.Tifrunner.gnm1.ann1.31D2RV Arachis hypogaea HOM05D005199 ORTHO05D006277 3.0e-117 426.0 386 63.5
FAN11G0779 Fragaria x ananassa HOM05D005199 ORTHO05D006277 4.0e-117 425.6 399 63.4
Ah.02g114560 Amaranthus hybridus HOM05D005199 ORTHO05D006277 4.4e-116 422.2 374 65.2
unitig_61.g26224 Utricularia gibba HOM05D005199 ORTHO05D006277 4.4e-116 422.2 312 74.7
Aqoxy5G03105 Aquilegia oxysepala HOM05D005199 ORTHO05D006277 5.4e-114 415.2 402 59.5
FAN21G1800 Fragaria x ananassa HOM05D005199 ORTHO05D006277 5.4e-114 415.2 397 57.4
FAN25G0693 Fragaria x ananassa HOM05D005199 ORTHO05D006277 6.0e-113 411.8 413 57.4
SGA_v2.0_scaffold168G38552 Striga asiatica HOM05D005199 ORTHO05D006277 3.9e-112 409.1 354 60.7
ATR0582G251 Amborella trichopoda HOM05D005199 ORTHO05D006277 1.9e-111 406.8 390 56.4
Zm00001eb430240 Zea mays HOM05D005199 ORTHO05D006277 2.2e-99 366.7 395 54.4
AUR62044212 Chenopodium quinoa HOM05D005199 ORTHO05D006277 3.2e-98 362.8 431 50.6
AUR62043310 Chenopodium quinoa HOM05D005199 ORTHO05D006277 4.7e-94 349.0 351 55.8
SEGI_03714 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 5.2e-93 345.5 383 52.7
Os04g0598300 Oryza sativa ssp. japonica HOM05D005199 ORTHO05D006277 1.3e-91 340.9 394 55.6
Zm00001eb071990 Zea mays HOM05D005199 ORTHO05D006277 4.9e-91 339.0 381 56.7
Mapoly0113s0034 Marchantia polymorpha HOM05D005199 ORTHO05D006277 1.7e-88 330.5 356 51.7
Lalb_Chr11g0069151 Lupinus albus HOM05D005199 ORTHO05D006277 2.1e-86 323.6 167 88.6
SEGI_00497 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 1.5e-84 317.4 345 50.7
Pp3c3_11670 Physcomitrium patens HOM05D005199 ORTHO05D006277 9.9e-84 314.7 329 50.8
Migut.D01179 Erythranthe guttata HOM05D005199 ORTHO05D006277 6.4e-83 312.0 179 79.9
Pp3c13_8760 Physcomitrium patens HOM05D005199 ORTHO05D006277 6.6e-80 302.0 304 52.6
Lalb_Chr12g0202561 Lupinus albus HOM05D005199 ORTHO05D006277 1.9e-79 300.4 279 69.9
Lalb_Chr07g0183841 Lupinus albus HOM05D005199 ORTHO05D006277 4.3e-79 299.3 280 67.9
HPP92_021614 Vanilla planifolia HOM05D005199 ORTHO05D006277 1.3e-78 297.7 373 49.1
FvH4_5g09660 Fragaria vesca HOM05D005199 ORTHO05D006277 5.3e-77 292.4 291 60.5
Sabra15G0071900 Salix brachista HOM05D005199 ORTHO05D006277 2.7e-73 280.0 268 61.6
Glyma.04G202002 Glycine max HOM05D005199 ORTHO05D006277 1.6e-70 270.8 138 90.6
PGSC0003DMG400014174 Solanum tuberosum HOM05D005199 ORTHO05D006277 4.9e-59 232.6 123 88.6
Lalb_Chr07g0183831 Lupinus albus HOM05D005199 ORTHO05D006277 3.9e-56 223.0 120 85.0
Actinidia18295 Actinidia chinensis HOM05D005199 ORTHO05D006277 1.8e-53 214.2 156 75.6
FAN25G1078 Fragaria x ananassa HOM05D005199 ORTHO05D006277 7.9e-49 198.7 251 53.0
SMO347G0183 Selaginella moellendorffii HOM05D005199 ORTHO05D006277 4.8e-46 189.5 113 72.6
CBR_g60061 Chara braunii HOM05D005199 ORTHO05D006277 9.1e-45 185.3 318 37.7
Lalb_Chr12g0202551 Lupinus albus HOM05D005199 ORTHO05D006277 1.0e-43 181.8 97 85.6
Lalb_Chr11g0069141 Lupinus albus HOM05D005199 ORTHO05D006277 3.3e-39 166.8 153 63.4
AagrBONN_evm.TU.Sc2ySwM_228.2166 Anthoceros agrestis HOM05D005199 ORTHO05D006277 5.5e-34 149.4 260 37.7
CANSAT11G1658 Cannabis sativa HOM05D005199 ORTHO05D006277 1.3e-27 128.3 100 68.0
CDE05G0289 Ceratophyllum demersum HOM05D000263 ORTHO05D000213 2.7e-20 104.0 110 50.9
SMO347G0146 Selaginella moellendorffii HOM05D005199 ORTHO05D006277 5.7e-15 86.3 86 45.3
unitig_61.g26223 Utricularia gibba HOM05D005199 ORTHO05D006277 7.2e-10 69.3 58 56.9
unitig_0.g1098 Utricularia gibba HOM05D005199 ORTHO05D006277 3.0e-08 63.9 71 45.1


User provided reference genes

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