Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G210500 Carya illinoinensis HOM05D006092 ORTHO05D007508 4.1e-72 274.6 140 100.0
QL08p000538 Quercus lobata HOM05D006092 ORTHO05D007508 4.1e-48 194.9 162 67.3
Cfa016959 Carpinus fangiana HOM05D006092 ORTHO05D007508 1.6e-47 193.0 166 66.9
Haze_09914 Corylus avellana HOM05D006092 ORTHO05D007508 1.0e-46 190.3 137 78.1
Prupe.6G035200 Prunus persica HOM05D006092 ORTHO05D007508 5.6e-45 184.5 164 66.5
MD03G1042800 Malus domestica HOM05D006092 ORTHO05D007508 3.6e-44 181.8 164 67.7
Glyma.04G112800 Glycine max HOM05D006092 ORTHO05D007508 1.4e-43 179.9 164 63.4
Lalb_Chr18g0048631 Lupinus albus HOM05D006092 ORTHO05D007508 8.9e-43 177.2 162 61.7
Glyma.06G321900 Glycine max HOM05D006092 ORTHO05D007508 1.2e-42 176.8 164 62.2
Atru.chr2.3894 Acer truncatum HOM05D006092 ORTHO05D007508 7.6e-42 174.1 162 62.3
Sabra16G0320400 Salix brachista HOM05D006092 ORTHO05D007508 1.3e-41 173.3 135 71.9
Lj3g0000125 Lotus japonicus HOM05D006092 ORTHO05D007508 2.9e-41 172.2 166 64.5
FAN25G2470 Fragaria x ananassa HOM05D006092 ORTHO05D007508 8.4e-41 170.6 165 64.8
RcHm_v2.0_Chr5g0074661 Rosa chinensis HOM05D006092 ORTHO05D007508 1.4e-40 169.9 165 64.8
Potri.011G168700 Populus trichocarpa HOM05D006092 ORTHO05D007508 3.2e-40 168.7 125 76.0
Sabra11G0138000 Salix brachista HOM05D006092 ORTHO05D007508 3.2e-40 168.7 127 74.0
Thecc.07G001800 Theobroma cacao HOM05D006092 ORTHO05D007508 4.2e-40 168.3 164 62.8
Potri.001G471900 Populus trichocarpa HOM05D006092 ORTHO05D007508 5.4e-40 167.9 137 70.8
Phvul.005G004000 Phaseolus vulgaris HOM05D006092 ORTHO05D007508 7.1e-40 167.5 162 59.3
FvH4_3g41620 Fragaria vesca HOM05D006092 ORTHO05D007508 9.3e-40 167.2 165 64.2
FAN11G0712 Fragaria x ananassa HOM05D006092 ORTHO05D007508 9.3e-40 167.2 165 64.2
VMungo1080G0991 Vigna mungo HOM05D006092 ORTHO05D007508 1.6e-39 166.4 134 67.2
ClCG10G004510 Citrullus lanatus HOM05D006092 ORTHO05D007508 3.5e-39 165.2 163 59.5
CsaV3_3G004330 Cucumis sativus L. HOM05D006092 ORTHO05D007508 4.6e-39 164.9 163 60.1
MELO3C014124.2 Cucumis melo HOM05D006092 ORTHO05D007508 1.0e-38 163.7 163 60.1
Psat5g231800 Pisum sativum HOM05D006092 ORTHO05D007508 1.0e-38 163.7 164 60.4
Nn1g07635 Nelumbo nucifera HOM05D006092 ORTHO05D007508 1.1e-37 160.2 171 57.3
Cpa.g.sc12.69 Carica papaya HOM05D006092 ORTHO05D007508 1.5e-37 159.8 167 58.7
GSVIVG01014842001 Vitis vinifera HOM05D006092 ORTHO05D007508 2.5e-37 159.1 168 58.9
Gohir.A04G001100 Gossypium hirsutum HOM05D006092 ORTHO05D007508 7.3e-37 157.5 163 58.3
BcaB02g10807 Brassica carinata HOM05D006092 ORTHO05D007508 9.6e-37 157.1 169 57.4
Gorai.009G454900 Gossypium raimondii HOM05D006092 ORTHO05D007508 9.6e-37 157.1 163 58.3
Ciclev10009769m.g Citrus clementina HOM05D006092 ORTHO05D007508 1.3e-36 156.8 167 60.5
PGR031G3987 Punica granatum HOM05D006092 ORTHO05D007508 1.3e-36 156.8 136 66.2
Aa31LG10G560 Aethionema arabicum HOM05D006092 ORTHO05D007508 1.6e-36 156.4 134 67.2
Sed0026101 Sechium edule HOM05D006092 ORTHO05D007508 1.6e-36 156.4 162 58.0
BcaC01g01548 Brassica carinata HOM05D006092 ORTHO05D007508 2.1e-36 156.0 170 59.4
BolC3t21605H Brassica oleracea HOM05D006092 ORTHO05D007508 2.1e-36 156.0 170 59.4
C03p93010 Brassica napus HOM05D006092 ORTHO05D007508 2.8e-36 155.6 170 59.4
EL10Ac3g07451 Beta vulgaris HOM05D006092 ORTHO05D007508 3.6e-36 155.2 162 55.6
TPR.G16714 Trifolium pratense HOM05D006092 ORTHO05D007508 3.6e-36 155.2 164 58.5
BcaC08g44210 Brassica carinata HOM05D006092 ORTHO05D007508 6.2e-36 154.5 167 56.9
BolC6t36815H Brassica oleracea HOM05D006092 ORTHO05D007508 6.2e-36 154.5 167 56.9
Carub.0001s4419 Capsella rubella HOM05D006092 ORTHO05D007508 6.2e-36 154.5 165 57.0
Gohir.A13G128600 Gossypium hirsutum HOM05D006092 ORTHO05D007508 8.1e-36 154.1 161 59.6
Gorai.013G148000 Gossypium raimondii HOM05D006092 ORTHO05D007508 1.1e-35 153.7 161 59.0
C06p16180 Brassica napus HOM05D006092 ORTHO05D007508 1.4e-35 153.3 167 56.3
Gohir.D13G132000 Gossypium hirsutum HOM05D006092 ORTHO05D007508 1.4e-35 153.3 161 59.0
A05p17350 Brassica napus HOM05D006092 ORTHO05D007508 1.8e-35 152.9 167 56.9
BraA05t20631Z Brassica rapa HOM05D006092 ORTHO05D007508 1.8e-35 152.9 167 56.9
TWI38G1372 Tripterygium wilfordii HOM05D006092 ORTHO05D007508 1.8e-35 152.9 137 67.9
A08p00380 Brassica napus HOM05D006092 ORTHO05D007508 3.1e-35 152.1 166 57.2
BraA08t32097Z Brassica rapa HOM05D006092 ORTHO05D007508 3.1e-35 152.1 166 57.2
TWI39G1159 Tripterygium wilfordii HOM05D006092 ORTHO05D007508 3.1e-35 152.1 137 67.9
A06p00060 Brassica napus HOM05D006092 ORTHO05D007508 4.0e-35 151.8 168 56.5
BraA06t23221Z Brassica rapa HOM05D006092 ORTHO05D007508 4.0e-35 151.8 168 56.5
BcaB04g16937 Brassica carinata HOM05D006092 ORTHO05D007508 5.3e-35 151.4 167 57.5
BcaC08g43644 Brassica carinata HOM05D006092 ORTHO05D007508 5.3e-35 151.4 168 56.5
C06p10630 Brassica napus HOM05D006092 ORTHO05D007508 5.3e-35 151.4 168 56.5
BolC6t36143H Brassica oleracea HOM05D006092 ORTHO05D007508 5.3e-35 151.4 168 56.5
AT1G55670 Arabidopsis thaliana HOM05D006092 ORTHO05D007508 1.2e-34 150.2 162 54.9
MBI14_g12737_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 1.2e-34 150.2 166 55.4
SalBow8G3834 Salvia bowleyana HOM05D006092 ORTHO05D007508 1.2e-34 150.2 137 62.0
Sc07g0002210 Simmondsia chinensis HOM05D006092 ORTHO05D007508 1.2e-34 150.2 163 54.0
BcaB07g33193 Brassica carinata HOM05D006092 ORTHO05D007508 1.5e-34 149.8 170 56.5
CANSAT11G0425 Cannabis sativa HOM05D006092 ORTHO05D007508 1.5e-34 149.8 165 57.0
ECA246G4981 Erigeron canadensis HOM05D006092 ORTHO05D007508 1.5e-34 149.8 140 62.1
MBI15_g47946_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 1.5e-34 149.8 168 54.8
Eucgr.F03646 Eucalyptus grandis HOM05D006092 ORTHO05D007508 2.0e-34 149.4 163 55.2
Manes.01G006400 Manihot esculenta HOM05D006092 ORTHO05D007508 2.0e-34 149.4 163 58.9
AL1G63740 Arabidopsis lyrata HOM05D006092 ORTHO05D007508 2.6e-34 149.1 167 55.7
Oeu013004.1 Olea europaea HOM05D006092 ORTHO05D007508 5.8e-34 147.9 160 56.2
Thhalv10011835m.g Eutrema salsugineum HOM05D006092 ORTHO05D007508 1.7e-33 146.4 170 55.9
THA.LOC104822703 Tarenaya hassleriana HOM05D006092 ORTHO05D007508 1.7e-33 146.4 167 56.3
PSO063G2976 Papaver somniferum HOM05D006092 ORTHO05D007508 2.2e-33 146.0 168 55.4
PSO782G4285 Papaver somniferum HOM05D006092 ORTHO05D007508 2.2e-33 146.0 168 55.4
THA.LOC104810303 Tarenaya hassleriana HOM05D006092 ORTHO05D007508 2.2e-33 146.0 162 55.6
CAN.G623.73 Capsicum annuum HOM05D006092 ORTHO05D007508 2.9e-33 145.6 140 60.7
Oeu006265.1 Olea europaea HOM05D006092 ORTHO05D007508 3.8e-33 145.2 142 59.9
PGSC0003DMG400022249 Solanum tuberosum HOM05D006092 ORTHO05D007508 3.8e-33 145.2 136 61.0
SGA_v2.0_scaffold186G40234 Striga asiatica HOM05D006092 ORTHO05D007508 3.8e-33 145.2 136 61.0
ATR0751G135 Amborella trichopoda HOM05D006092 ORTHO05D007508 4.9e-33 144.8 166 54.8
Sopen07g034330 Solanum pennellii HOM05D006092 ORTHO05D007508 4.9e-33 144.8 136 61.0
Ah.04g149440 Amaranthus hybridus HOM05D006092 ORTHO05D007508 1.9e-32 142.9 166 53.6
CARHR045350 Cardamine hirsuta HOM05D006092 ORTHO05D007508 1.9e-32 142.9 167 53.9
HanXRQChr08g0232881 Helianthus annuus HOM05D006092 ORTHO05D007508 1.9e-32 142.9 141 61.7
Solyc07g066150.1 Solanum lycopersicum HOM05D006092 ORTHO05D007508 1.9e-32 142.9 136 58.8
CDE05G1532 Ceratophyllum demersum HOM05D006092 ORTHO05D007508 5.4e-32 141.4 161 50.9
Aqoxy4G02265 Aquilegia oxysepala HOM05D006092 ORTHO05D007508 7.1e-32 141.0 169 53.8
Migut.M01583 Erythranthe guttata HOM05D006092 ORTHO05D007508 9.3e-32 140.6 139 57.6
HanXRQChr05g0160351 Helianthus annuus HOM05D006092 ORTHO05D007508 9.3e-32 140.6 133 61.7
MBI15_g47073_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 9.3e-32 140.6 165 52.7
CDE11G0224 Ceratophyllum demersum HOM05D006092 ORTHO05D007508 1.6e-31 139.8 161 50.3
Lsat_1_v5_gn_5_381 Lactuca sativa HOM05D006092 ORTHO05D007508 2.1e-31 139.4 139 62.6
AUR62018553 Chenopodium quinoa HOM05D006092 ORTHO05D007508 2.7e-31 139.0 101 72.3
AUR62020866 Chenopodium quinoa HOM05D006092 ORTHO05D007508 2.7e-31 139.0 101 72.3
Sed0012341 Sechium edule HOM05D006092 ORTHO05D007508 2.7e-31 139.0 138 60.9
Nitab4.5_0000611g0110 Nicotiana tabacum HOM05D006092 ORTHO05D007508 3.5e-31 138.7 165 54.5
Nitab4.5_0000611g0120 Nicotiana tabacum HOM05D006092 ORTHO05D007508 3.5e-31 138.7 165 54.5
arahy.Tifrunner.gnm1.ann1.4PD0PP Arachis hypogaea HOM05D006092 ORTHO05D007508 6.0e-31 137.9 164 52.4
Rhsim04G0007400 Rhododendron simsii HOM05D006092 ORTHO05D007508 7.9e-31 137.5 165 55.2
unitig_37.g11908 Utricularia gibba HOM05D006092 ORTHO05D007508 7.9e-31 137.5 135 57.8
COL.COLO4_07787 Corchorus olitorius HOM05D006092 ORTHO05D007508 1.3e-30 136.7 100 72.0
unitig_92.g28271 Utricularia gibba HOM05D006092 ORTHO05D007508 3.0e-30 135.6 133 57.9
Lj8P183T26 Lonicera japonica HOM05D006092 ORTHO05D007508 3.9e-30 135.2 123 61.0
Nitab4.5_0001622g0160 Nicotiana tabacum HOM05D006092 ORTHO05D007508 5.1e-30 134.8 139 59.7
Medtr3g010000 Medicago truncatula HOM05D006092 ORTHO05D007508 6.7e-30 134.4 164 52.4
CARHR087970 Cardamine hirsuta HOM05D006092 ORTHO05D007508 2.5e-29 132.5 163 52.8
Os09g0481200 Oryza sativa ssp. japonica HOM05D006092 ORTHO05D007508 1.3e-28 130.2 131 55.7
Zm00001eb316290 Zea mays HOM05D006092 ORTHO05D007508 1.3e-28 130.2 139 54.7
HPP92_022812 Vanilla planifolia HOM05D006092 ORTHO05D007508 1.1e-27 127.1 113 61.9
SEGI_13197 Sequoiadendron giganteum HOM05D006092 ORTHO05D007508 2.9e-25 119.0 111 62.2
Zm00001eb101660 Zea mays HOM05D006092 ORTHO05D007508 2.9e-25 119.0 139 51.8
Nitab4.5_0000611g0130 Nicotiana tabacum HOM05D006092 ORTHO05D007508 1.9e-24 116.3 111 64.9
Dinv40914 Davidia involucrata HOM05D006092 ORTHO05D007508 6.0e-23 111.3 136 51.5
Sp1g41280 Schrenkiella parvula HOM05D006092 ORTHO05D007508 6.2e-20 101.3 145 51.0
Pp3c9_15440 Physcomitrium patens HOM05D006092 ORTHO05D007508 1.1e-19 100.5 137 48.9
EL10As5g23536 Beta vulgaris HOM05D006092 ORTHO05D007508 1.4e-19 100.1 52 92.3
PGSC0003DMG400006702 Solanum tuberosum HOM05D006092 ORTHO05D007508 1.4e-19 100.1 137 46.0
EL10Ac3g06625 Beta vulgaris HOM05D006092 ORTHO05D007508 6.9e-19 97.8 50 94.0
EL10Ac5g10941 Beta vulgaris HOM05D006092 ORTHO05D007508 6.9e-19 97.8 50 94.0
Pp3c15_5850 Physcomitrium patens HOM05D006092 ORTHO05D007508 1.5e-18 96.7 108 50.0
AagrBONN_evm.TU.Sc2ySwM_228.5128 Anthoceros agrestis HOM05D006092 ORTHO05D007508 5.5e-16 88.2 94 52.1
SMO353G0046 Selaginella moellendorffii HOM05D006092 ORTHO05D007508 7.1e-16 87.8 70 61.4
Mapoly0038s0054 Marchantia polymorpha HOM05D006092 ORTHO05D007508 1.0e-14 84.0 163 35.6
CBR_g28070 Chara braunii HOM05D006092 ORTHO05D007508 1.3e-14 83.6 97 48.5
TAR627G0509 Trochodendron aralioides HOM05D006092 ORTHO05D007508 5.9e-10 68.2 72 54.2
PRCOL_00006984 Prasinoderma coloniale HOM05D006092 ORTHO05D007508 7.2e-08 61.2 67 49.3
MCO01G478 Micromonas commoda HOM05D006092 ORTHO05D007508 1.6e-07 60.1 66 51.5


User provided reference genes

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