Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G192900 Carya illinoinensis HOM05D007542 ORTHO05D009519 7.0e-92 340.9 208 100.0
QL08p006891 Quercus lobata HOM05D007542 ORTHO05D009519 5.4e-60 235.0 208 76.0
Cfa020302 Carpinus fangiana HOM05D007542 ORTHO05D009519 2.4e-52 209.5 210 70.5
TAR643G0006 Trochodendron aralioides HOM05D007542 ORTHO05D009519 8.6e-50 201.1 210 58.1
Cpa.g.sc12.265 Carica papaya HOM05D007542 ORTHO05D009519 1.5e-49 200.3 211 58.8
GSVIVG01037700001 Vitis vinifera HOM05D007542 ORTHO05D009519 3.3e-49 199.1 212 58.5
Manes.03G133100 Manihot esculenta HOM05D007542 ORTHO05D009519 1.8e-47 193.4 209 57.4
Eucgr.F00716 Eucalyptus grandis HOM05D007542 ORTHO05D009519 9.8e-46 187.6 220 57.7
Thecc.07G031100 Theobroma cacao HOM05D007542 ORTHO05D009519 1.3e-45 187.2 208 60.6
Ciclev10009585m.g Citrus clementina HOM05D007542 ORTHO05D009519 3.7e-45 185.7 205 55.6
Nn1g03444 Nelumbo nucifera HOM05D007542 ORTHO05D009519 1.9e-44 183.3 221 54.8
Dinv22244 Davidia involucrata HOM05D007542 ORTHO05D009519 5.4e-44 181.8 202 56.9
Potri.011G087000 Populus trichocarpa HOM05D007542 ORTHO05D009519 1.2e-43 180.6 211 55.5
MD11G1212200 Malus domestica HOM05D007542 ORTHO05D009519 1.0e-42 177.6 215 52.6
Duzib170G0581 Durio zibethinus HOM05D007542 ORTHO05D009519 6.6e-42 174.9 209 54.5
Prupe.4G220200 Prunus persica HOM05D007542 ORTHO05D009519 1.5e-41 173.7 212 51.9
CSS0027066 Camellia sinensis var. sinensis HOM05D007542 ORTHO05D009519 3.3e-41 172.6 210 59.5
RcHm_v2.0_Chr5g0040991 Rosa chinensis HOM05D007542 ORTHO05D009519 5.6e-41 171.8 215 52.6
TWI38G0725 Tripterygium wilfordii HOM05D007542 ORTHO05D009519 5.6e-41 171.8 208 56.2
Hma1.2p1_1332F.1_g276050 Hydrangea macrophylla HOM05D007542 ORTHO05D009519 9.5e-41 171.0 212 54.2
Gorai.002G092100 Gossypium raimondii HOM05D007542 ORTHO05D009519 1.2e-40 170.6 211 55.0
COL.COLO4_09703 Corchorus olitorius HOM05D007542 ORTHO05D009519 2.8e-40 169.5 215 59.1
MD03G1195800 Malus domestica HOM05D007542 ORTHO05D009519 8.1e-40 167.9 211 51.2
Prupe.4G220300 Prunus persica HOM05D007542 ORTHO05D009519 1.4e-39 167.2 222 49.5
Gohir.D01G069700 Gossypium hirsutum HOM05D007542 ORTHO05D009519 1.8e-39 166.8 212 53.3
FAN16G3720 Fragaria x ananassa HOM05D007542 ORTHO05D009519 2.3e-39 166.4 220 48.6
Sabra11G0071000 Salix brachista HOM05D007542 ORTHO05D009519 3.1e-39 166.0 210 52.9
FAN21G0453 Fragaria x ananassa HOM05D007542 ORTHO05D009519 5.2e-39 165.2 220 48.2
FvH4_3g23270 Fragaria vesca HOM05D007542 ORTHO05D009519 2.6e-38 162.9 220 47.7
FAN25G0364 Fragaria x ananassa HOM05D007542 ORTHO05D009519 3.7e-37 159.1 214 48.1
FAN25G1685 Fragaria x ananassa HOM05D007542 ORTHO05D009519 3.7e-37 159.1 214 48.1
TAR626G0917 Trochodendron aralioides HOM05D007542 ORTHO05D009519 4.9e-37 158.7 196 54.6
MSTRG.6947 Avicennia marina HOM05D007542 ORTHO05D009519 3.2e-36 156.0 208 49.5
FAN11G1962 Fragaria x ananassa HOM05D007542 ORTHO05D009519 1.2e-35 154.1 210 47.1
Atru.chr2.3499 Acer truncatum HOM05D007542 ORTHO05D009519 3.9e-34 149.1 225 48.0
MELO3C014190.2 Cucumis melo HOM05D007542 ORTHO05D009519 3.9e-34 149.1 210 52.4
CsaV3_3G004930 Cucumis sativus L. HOM05D007542 ORTHO05D009519 3.9e-34 149.1 209 53.1
Cc05_g14120 Coffea canephora HOM05D007542 ORTHO05D009519 1.1e-33 147.5 220 50.0
Aqoxy1G03049 Aquilegia oxysepala HOM05D007542 ORTHO05D009519 5.6e-33 145.2 217 44.7
Medtr5g093430 Medicago truncatula HOM05D007542 ORTHO05D009519 2.8e-32 142.9 201 48.3
Lalb_Chr04g0248281 Lupinus albus HOM05D007542 ORTHO05D009519 4.7e-32 142.1 199 51.3
Nn1g07236 Nelumbo nucifera HOM05D007542 ORTHO05D009519 8.1e-32 141.4 214 53.7
DCAR_016720 Daucus carota HOM05D007542 ORTHO05D009519 1.8e-31 140.2 215 47.4
LjContig00272g0021523 Lotus japonicus HOM05D007542 ORTHO05D009519 1.8e-31 140.2 196 48.5
Rhsim06G0222000 Rhododendron simsii HOM05D007542 ORTHO05D009519 7.6e-30 134.8 211 48.3
Phvul.006G046800 Phaseolus vulgaris HOM05D007542 ORTHO05D009519 1.3e-29 134.0 208 46.2
PGSC0003DMG400014384 Solanum tuberosum HOM05D007542 ORTHO05D009519 1.7e-29 133.7 229 43.7
Glyma.18G092800 Glycine max HOM05D007542 ORTHO05D009519 3.8e-29 132.5 208 45.7
Oeu026398.1 Olea europaea HOM05D007542 ORTHO05D009519 6.4e-29 131.7 212 46.7
Psat2g012360 Pisum sativum HOM05D007542 ORTHO05D009519 6.4e-29 131.7 198 46.5
Dinv40786 Davidia involucrata HOM05D007542 ORTHO05D009519 1.9e-28 130.2 203 46.3
TAR624G0015 Trochodendron aralioides HOM05D007542 ORTHO05D009519 1.9e-28 130.2 201 54.7
TPR.G1179 Trifolium pratense HOM05D007542 ORTHO05D009519 4.2e-28 129.0 200 46.0
Medtr5g093440 Medicago truncatula HOM05D007542 ORTHO05D009519 5.4e-28 128.6 198 46.0
Psat2g012400 Pisum sativum HOM05D007542 ORTHO05D009519 7.1e-28 128.3 196 46.4
Nitab4.5_0000328g0130 Nicotiana tabacum HOM05D007542 ORTHO05D009519 2.1e-27 126.7 215 42.3
Actinidia05075 Actinidia chinensis HOM05D007542 ORTHO05D009519 7.8e-27 124.8 191 50.3
Lj6g0015208 Lotus japonicus HOM05D007542 ORTHO05D009519 2.3e-26 123.2 196 43.4
TPR.G17892 Trifolium pratense HOM05D007542 ORTHO05D009519 2.3e-26 123.2 197 45.2
CAN.G492.20 Capsicum annuum HOM05D007542 ORTHO05D009519 3.0e-26 122.9 221 42.1
Glyma.08G319700 Glycine max HOM05D007542 ORTHO05D009519 5.1e-26 122.1 208 43.3
Nitab4.5_0002826g0080 Nicotiana tabacum HOM05D007542 ORTHO05D009519 5.1e-26 122.1 214 43.9
Glyma.14G021700 Glycine max HOM05D007542 ORTHO05D009519 1.1e-25 120.9 197 47.2
arahy.Tifrunner.gnm1.ann1.ENS6UV Arachis hypogaea HOM05D007542 ORTHO05D009519 1.6e-24 117.1 208 46.2
MBI10_g09179_MAGBIO Magnolia biondii HOM05D007542 ORTHO05D009519 1.6e-24 117.1 202 42.6
Hma1.2p1_3935F.1_g338010 Hydrangea macrophylla HOM05D007542 ORTHO05D009519 4.7e-24 115.5 146 54.1
Solyc10g006150.3 Solanum lycopersicum HOM05D007542 ORTHO05D009519 1.4e-23 114.0 224 41.5
Manes.15G067900 Manihot esculenta HOM05D007542 ORTHO05D009519 1.2e-22 110.9 147 51.7
PSO541G2394 Papaver somniferum HOM05D007542 ORTHO05D009519 1.5e-22 110.5 240 40.0
Phvul.008G269700 Phaseolus vulgaris HOM05D007542 ORTHO05D009519 3.4e-22 109.4 196 43.4
Ca_06340_v3 Cicer arietinum L. HOM05D007542 ORTHO05D009519 7.6e-22 108.2 200 43.5
VMungo0647G1207 Vigna mungo HOM05D007542 ORTHO05D009519 9.9e-22 107.8 198 43.4
Oeu008012.1 Olea europaea HOM05D007542 ORTHO05D009519 1.7e-21 107.1 191 43.5
MSTRG.12988 Avicennia marina HOM05D007542 ORTHO05D009519 3.8e-21 105.9 193 41.5
Peaxi162Scf00235g00059 Petunia axillaris HOM05D007542 ORTHO05D009519 6.4e-21 105.1 176 43.2
Lj1P878T38 Lonicera japonica HOM05D007542 ORTHO05D009519 1.9e-20 103.6 160 46.9
Lj6g0001233 Lotus japonicus HOM05D007542 ORTHO05D009519 3.2e-20 102.8 235 37.9
Sc16g0005830 Simmondsia chinensis HOM05D007542 ORTHO05D009519 5.4e-20 102.1 209 45.5
Sopen07g033030 Solanum pennellii HOM05D007542 ORTHO05D009519 7.1e-20 101.7 205 39.5
CAN.G337.69 Capsicum annuum HOM05D007542 ORTHO05D009519 1.6e-19 100.5 202 43.1
EL10Ac4g07752 Beta vulgaris HOM05D007542 ORTHO05D009519 2.1e-19 100.1 210 40.0
Ca_25812_v3 Cicer arietinum L. HOM05D007542 ORTHO05D009519 2.7e-19 99.8 195 40.0
Gohir.A01G083201 Gossypium hirsutum HOM05D007542 ORTHO05D009519 3.5e-19 99.4 108 55.6
Sc03g0008420 Simmondsia chinensis HOM05D007542 ORTHO05D009519 1.3e-18 97.4 199 40.2
arahy.Tifrunner.gnm1.ann1.T42YYR Arachis hypogaea HOM05D007542 ORTHO05D009519 2.5e-17 93.2 195 40.0
Medtr3g053160 Medicago truncatula HOM05D007542 ORTHO05D009519 2.5e-17 93.2 197 37.6
arahy.Tifrunner.gnm1.ann1.C8UBJW Arachis hypogaea HOM05D007542 ORTHO05D009519 4.3e-17 92.4 195 39.5
Sopen10g002100 Solanum pennellii HOM05D007542 ORTHO05D009519 5.6e-17 92.0 119 48.7
Migut.H01805 Erythranthe guttata HOM05D007542 ORTHO05D009519 9.6e-17 91.3 211 37.0
PGSC0003DMG400022335 Solanum tuberosum HOM05D007542 ORTHO05D009519 6.2e-16 88.6 184 35.9
Aqoxy1G03452 Aquilegia oxysepala HOM05D007542 ORTHO05D009519 1.2e-14 84.3 161 37.9
VMungo0540G1120 Vigna mungo HOM05D007542 ORTHO05D009519 2.2e-13 80.1 202 36.6
CDE08G0529 Ceratophyllum demersum HOM05D007542 ORTHO05D009519 5.1e-10 68.9 155 32.3
Os01g0532300 Oryza sativa ssp. japonica HOM05D007542 ORTHO05D009519 1.4e-07 60.8 36 75.0


User provided reference genes

Program Settings