Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G185700 Carya illinoinensis HOM05D006520 ORTHO05D008405 4.8e-166 587.8 305 100.0
CiPaw.11G185500 Carya illinoinensis HOM05D006520 ORTHO05D008405 9.1e-133 477.2 380 72.4
QL08p012619 Quercus lobata HOM05D006520 ORTHO05D008405 8.9e-112 407.5 289 77.5
Cfa020400 Carpinus fangiana HOM05D006520 ORTHO05D008405 3.0e-107 392.5 289 74.7
Haze_09634 Corylus avellana HOM05D006520 ORTHO05D008405 1.1e-106 390.6 289 74.4
Cpa.g.sc1133.1 Carica papaya HOM05D006520 ORTHO05D008405 5.8e-103 378.3 289 70.9
Dinv22290 Davidia involucrata HOM05D006520 ORTHO05D008405 3.5e-100 369.0 289 70.6
Eucgr.F00972 Eucalyptus grandis HOM05D006520 ORTHO05D008405 7.8e-100 367.9 289 68.9
Atru.chr2.3238 Acer truncatum HOM05D006520 ORTHO05D008405 3.9e-99 365.5 289 69.2
TWI38G0825 Tripterygium wilfordii HOM05D006520 ORTHO05D008405 1.9e-98 363.2 289 69.6
PGR083G2407 Punica granatum HOM05D006520 ORTHO05D008405 8.1e-97 357.8 289 67.8
vmacro11755 Vaccinium macrocarpon HOM05D006520 ORTHO05D008405 1.1e-96 357.5 289 68.9
RcHm_v2.0_Chr5g0037851 Rosa chinensis HOM05D006520 ORTHO05D008405 1.8e-96 356.7 289 69.2
Nn3g21422 Nelumbo nucifera HOM05D006520 ORTHO05D008405 5.2e-96 355.1 290 67.6
Duzib213G0852 Durio zibethinus HOM05D006520 ORTHO05D008405 2.0e-95 353.2 289 67.5
ClCG05G014620 Citrullus lanatus HOM05D006520 ORTHO05D008405 3.4e-95 352.4 367 57.2
MD03G1209400 Malus domestica HOM05D006520 ORTHO05D008405 4.4e-95 352.1 289 67.8
TAR362G1255 Trochodendron aralioides HOM05D006520 ORTHO05D008405 5.8e-95 351.7 293 65.2
COL.COLO4_09604 Corchorus olitorius HOM05D006520 ORTHO05D008405 3.7e-94 349.0 290 66.6
Lj8A167T45 Lonicera japonica HOM05D006520 ORTHO05D008405 3.7e-94 349.0 289 67.1
Cc05_g13380 Coffea canephora HOM05D006520 ORTHO05D008405 3.2e-93 345.9 290 65.2
FAN16G1768 Fragaria x ananassa HOM05D006520 ORTHO05D008405 3.2e-93 345.9 289 65.4
CSS0025953 Camellia sinensis var. sinensis HOM05D006520 ORTHO05D008405 4.1e-93 345.5 284 68.3
FAN21G1190 Fragaria x ananassa HOM05D006520 ORTHO05D008405 4.1e-93 345.5 289 65.4
Glyma.06G270300 Glycine max HOM05D006520 ORTHO05D008405 1.2e-92 344.0 289 66.8
Thecc.07G046500 Theobroma cacao HOM05D006520 ORTHO05D008405 1.2e-92 344.0 290 65.9
Sed0027741 Sechium edule HOM05D006520 ORTHO05D008405 1.6e-92 343.6 291 65.6
FvH4_3g22000 Fragaria vesca HOM05D006520 ORTHO05D008405 2.1e-92 343.2 289 65.1
GSVIVG01001984001 Vitis vinifera HOM05D006520 ORTHO05D008405 2.7e-92 342.8 290 66.9
ECA246G0715 Erigeron canadensis HOM05D006520 ORTHO05D008405 6.0e-92 341.7 264 70.8
Ciclev10008777m.g Citrus clementina HOM05D006520 ORTHO05D008405 7.8e-92 341.3 289 66.8
Prupe.4G205700 Prunus persica HOM05D006520 ORTHO05D008405 3.9e-91 339.0 289 65.1
THA.LOC104817880 Tarenaya hassleriana HOM05D006520 ORTHO05D008405 1.9e-90 336.7 266 67.3
Gorai.002G084200 Gossypium raimondii HOM05D006520 ORTHO05D008405 9.5e-90 334.3 289 64.7
Aqoxy5G00708 Aquilegia oxysepala HOM05D006520 ORTHO05D008405 1.2e-89 334.0 291 64.3
CsaV3_3G023150 Cucumis sativus L. HOM05D006520 ORTHO05D008405 1.6e-89 333.6 291 63.6
CANSAT35G1182 Cannabis sativa HOM05D006520 ORTHO05D008405 2.8e-89 332.8 289 65.7
MELO3C018098.2 Cucumis melo HOM05D006520 ORTHO05D008405 2.8e-89 332.8 291 63.2
HanXRQChr08g0234071 Helianthus annuus HOM05D006520 ORTHO05D008405 2.8e-89 332.8 265 68.7
Potri.011G135600 Populus trichocarpa HOM05D006520 ORTHO05D008405 2.8e-89 332.8 284 65.5
AL1G58660 Arabidopsis lyrata HOM05D006520 ORTHO05D008405 6.2e-89 331.6 294 62.6
DCAR_010030 Daucus carota HOM05D006520 ORTHO05D008405 8.1e-89 331.3 289 63.3
Gohir.A01G076200 Gossypium hirsutum HOM05D006520 ORTHO05D008405 1.1e-88 330.9 289 64.4
Nitab4.5_0000653g0110 Nicotiana tabacum HOM05D006520 ORTHO05D008405 1.1e-88 330.9 381 53.0
Thhalv10011599m.g Eutrema salsugineum HOM05D006520 ORTHO05D008405 1.8e-88 330.1 290 63.1
Gohir.D01G063700 Gossypium hirsutum HOM05D006520 ORTHO05D008405 1.8e-88 330.1 289 63.7
Nitab4.5_0004600g0010 Nicotiana tabacum HOM05D006520 ORTHO05D008405 1.2e-87 327.4 381 52.2
Lj3g0004956 Lotus japonicus HOM05D006520 ORTHO05D008405 1.5e-87 327.0 290 63.1
Aa31LG10G3340 Aethionema arabicum HOM05D006520 ORTHO05D008405 2.0e-87 326.6 290 60.3
Oeu021407.1 Olea europaea HOM05D006520 ORTHO05D008405 7.6e-87 324.7 290 64.1
Migut.M01795 Erythranthe guttata HOM05D006520 ORTHO05D008405 9.9e-87 324.3 290 62.4
Sabra11G0121700 Salix brachista HOM05D006520 ORTHO05D008405 9.9e-87 324.3 302 60.6
AT1G50940 Arabidopsis thaliana HOM05D006520 ORTHO05D008405 1.3e-86 323.9 292 61.3
AUR62043225 Chenopodium quinoa HOM05D006520 ORTHO05D008405 1.3e-86 323.9 290 63.1
Lalb_Chr03g0030081 Lupinus albus HOM05D006520 ORTHO05D008405 2.2e-86 323.2 286 63.3
Medtr4g080790 Medicago truncatula HOM05D006520 ORTHO05D008405 2.2e-86 323.2 290 63.8
PSO832G0135 Papaver somniferum HOM05D006520 ORTHO05D008405 2.2e-86 323.2 278 64.7
Sabra11G0121400 Salix brachista HOM05D006520 ORTHO05D008405 2.9e-86 322.8 302 60.3
Carub.0001s3988 Capsella rubella HOM05D006520 ORTHO05D008405 3.8e-86 322.4 294 61.2
PSO210G5695 Papaver somniferum HOM05D006520 ORTHO05D008405 4.9e-86 322.0 278 64.4
SalBow6G5624 Salvia bowleyana HOM05D006520 ORTHO05D008405 4.9e-86 322.0 291 63.9
Phvul.011G139475 Phaseolus vulgaris HOM05D006520 ORTHO05D008405 6.4e-86 321.6 289 63.0
CARHR040980 Cardamine hirsuta HOM05D006520 ORTHO05D008405 1.4e-85 320.5 289 61.9
Lsat_1_v5_gn_7_65980 Lactuca sativa HOM05D006520 ORTHO05D008405 1.9e-85 320.1 260 65.4
Sc16g0006360 Simmondsia chinensis HOM05D006520 ORTHO05D008405 1.9e-85 320.1 289 63.7
Peaxi162Scf01097g00110 Petunia axillaris HOM05D006520 ORTHO05D008405 2.7e-84 316.2 361 53.7
AUR62020529 Chenopodium quinoa HOM05D006520 ORTHO05D008405 3.5e-84 315.8 289 61.6
Hund18268 Selenicereus undatus HOM05D006520 ORTHO05D008405 3.5e-84 315.8 289 63.0
PGSC0003DMG400001100 Solanum tuberosum HOM05D006520 ORTHO05D008405 4.6e-84 315.5 290 62.8
arahy.Tifrunner.gnm1.ann1.45MNV2 Arachis hypogaea HOM05D006520 ORTHO05D008405 6.0e-84 315.1 291 62.2
Solyc12g005200.3 Solanum lycopersicum HOM05D006520 ORTHO05D008405 6.0e-84 315.1 290 62.8
Ca_18859_v3 Cicer arietinum L. HOM05D006520 ORTHO05D008405 1.0e-83 314.3 291 62.5
Sopen12g001190 Solanum pennellii HOM05D006520 ORTHO05D008405 1.3e-83 313.9 290 62.1
VMungo1127G1053 Vigna mungo HOM05D006520 ORTHO05D008405 3.9e-83 312.4 289 62.3
Sp1g37680 Schrenkiella parvula HOM05D006520 ORTHO05D008405 5.1e-83 312.0 291 60.8
A08p03100 Brassica napus HOM05D006520 ORTHO05D008405 8.6e-83 311.2 287 60.3
SGA_v2.0_scaffold258G45796 Striga asiatica HOM05D006520 ORTHO05D008405 8.6e-83 311.2 258 66.3
Ah.06g182970 Amaranthus hybridus HOM05D006520 ORTHO05D008405 1.5e-82 310.5 268 62.3
BcaC01g01246 Brassica carinata HOM05D006520 ORTHO05D008405 1.5e-82 310.5 290 59.3
BolC3t21294H Brassica oleracea HOM05D006520 ORTHO05D008405 1.5e-82 310.5 290 59.3
BcaB04g17242 Brassica carinata HOM05D006520 ORTHO05D008405 3.3e-82 309.3 292 59.6
BraA08t32341Z Brassica rapa HOM05D006520 ORTHO05D008405 3.3e-82 309.3 287 59.9
C03p89710 Brassica napus HOM05D006520 ORTHO05D008405 3.6e-81 305.8 290 59.0
CAN.G315.8 Capsicum annuum HOM05D006520 ORTHO05D008405 4.7e-81 305.4 285 61.8
ATR0706G183 Amborella trichopoda HOM05D006520 ORTHO05D008405 2.4e-80 303.1 262 61.1
Zm00001eb063680 Zea mays HOM05D006520 ORTHO05D008405 3.4e-79 299.3 271 59.0
Psat7g163040 Pisum sativum HOM05D006520 ORTHO05D008405 9.9e-79 297.7 288 60.8
Os03g0835400 Oryza sativa ssp. japonica HOM05D006520 ORTHO05D008405 1.0e-75 287.7 264 59.8
Manes.15G075200 Manihot esculenta HOM05D006520 ORTHO05D008405 8.7e-75 284.6 178 80.9
HPP92_026253 Vanilla planifolia HOM05D006520 ORTHO05D008405 1.5e-74 283.9 256 57.8
TPR.G25908 Trifolium pratense HOM05D006520 ORTHO05D008405 4.3e-74 282.3 224 67.0
EL10Ac4g07934 Beta vulgaris HOM05D006520 ORTHO05D008405 1.8e-72 276.9 291 56.7
Actinidia09928 Actinidia chinensis HOM05D006520 ORTHO05D008405 4.0e-72 275.8 178 78.1
SHI31861 Sapria himalayana HOM05D006520 ORTHO05D008405 9.9e-63 244.6 257 54.9
CsaV3_3G025190 Cucumis sativus L. HOM05D006520 ORTHO05D008405 1.0e-59 234.6 214 60.7
Pp3c15_18640 Physcomitrium patens HOM05D006520 ORTHO05D008405 1.5e-58 230.7 262 48.1
Mapoly0055s0094 Marchantia polymorpha HOM05D006520 ORTHO05D008405 3.3e-58 229.6 278 46.4
TAR362G0323 Trochodendron aralioides HOM05D000062 ORTHO05D000043 4.3e-58 229.2 232 55.2
SMO169G0265 Selaginella moellendorffii HOM05D006520 ORTHO05D008405 1.8e-56 223.8 260 50.0
unitig_62.g23270 Utricularia gibba HOM05D006520 ORTHO05D008405 9.0e-56 221.5 200 60.5
AagrBONN_evm.TU.Sc2ySwM_228.3593 Anthoceros agrestis HOM05D006520 ORTHO05D008405 4.2e-45 186.0 197 49.7
Glyma.12G134400 Glycine max HOM05D006520 ORTHO05D008405 7.9e-44 181.8 159 62.3
SEGI_24363 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 1.7e-38 164.1 160 54.4
CsaV3_UNG094720 Cucumis sativus L. HOM05D006520 ORTHO05D008405 1.0e-35 154.8 133 62.4
Cre16.g687950 Chlamydomonas reinhardtii HOM05D006520 ORTHO05D008405 1.8e-32 144.1 275 35.6
Haze_27296 Corylus avellana HOM05D006520 ORTHO05D008405 8.0e-28 128.6 181 42.0
PRCOL_00001901 Prasinoderma coloniale HOM05D006520 ORTHO05D008405 3.7e-25 119.8 174 42.0
Haze_27029 Corylus avellana HOM05D006520 ORTHO05D008405 1.8e-24 117.5 253 34.4
CDE01G0592 Ceratophyllum demersum HOM05D006520 ORTHO05D008405 9.1e-24 115.2 93 65.6
Cfa027367 Carpinus fangiana HOM05D006520 ORTHO05D008405 1.3e-22 111.3 266 32.0
CsaV3_UNG094710 Cucumis sativus L. HOM05D006520 ORTHO05D008405 1.3e-22 111.3 97 62.9
Actinidia27215 Actinidia chinensis HOM05D006520 ORTHO05D008405 3.6e-20 103.2 162 48.1
SEGI_23300 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 6.1e-20 102.4 89 61.8
Pp3c15_18800 Physcomitrium patens HOM05D006520 ORTHO05D008405 1.8e-19 100.9 116 50.0
CsaV3_3G025180 Cucumis sativus L. HOM05D006520 ORTHO05D008405 1.6e-15 87.8 50 82.0
arahy.Tifrunner.gnm1.ann1.3QT6IB Arachis hypogaea HOM05D006520 ORTHO05D008405 5.2e-11 72.8 94 51.1
Zm00001eb241410 Zea mays HOM05D006520 ORTHO05D442212 5.4e-08 62.8 47 66.0


User provided reference genes

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