Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G183700 Carya illinoinensis HOM05D007184 ORTHO05D008987 8.5e-112 407.1 225 100.0
QL08p013337 Quercus lobata HOM05D007184 ORTHO05D008987 4.6e-81 305.1 229 79.9
Cfa020415 Carpinus fangiana HOM05D007184 ORTHO05D008987 2.5e-79 299.3 227 77.1
QL08p013467 Quercus lobata HOM05D007184 ORTHO05D008987 1.1e-77 293.9 230 75.7
COL.COLO4_09571 Corchorus olitorius HOM05D007184 ORTHO05D008987 2.9e-75 285.8 224 72.3
Thecc.07G052800 Theobroma cacao HOM05D007184 ORTHO05D008987 1.2e-73 280.4 228 71.5
QL08p013286 Quercus lobata HOM05D007184 ORTHO05D008987 1.6e-73 280.0 227 76.7
Gohir.D13G146000 Gossypium hirsutum HOM05D007184 ORTHO05D008987 6.0e-73 278.1 226 69.5
Gorai.013G163800 Gossypium raimondii HOM05D007184 ORTHO05D008987 5.1e-72 275.0 226 69.0
RcHm_v2.0_Chr4g0410121 Rosa chinensis HOM05D007184 ORTHO05D008987 5.1e-72 275.0 227 70.5
Gohir.A13G141300 Gossypium hirsutum HOM05D007184 ORTHO05D008987 1.1e-71 273.9 226 68.6
RcHm_v2.0_Chr5g0037571 Rosa chinensis HOM05D007184 ORTHO05D008987 7.3e-71 271.2 227 70.0
Prupe.4G202500 Prunus persica HOM05D007184 ORTHO05D008987 6.2e-70 268.1 226 67.3
Medtr2g082930 Medicago truncatula HOM05D007184 ORTHO05D008987 1.4e-69 266.9 228 67.5
Glyma.12G214300 Glycine max HOM05D007184 ORTHO05D008987 3.1e-69 265.8 225 68.0
Duzib268G1070 Durio zibethinus HOM05D007184 ORTHO05D008987 6.8e-69 264.6 227 67.0
Lalb_Chr14g0366141 Lupinus albus HOM05D007184 ORTHO05D008987 1.2e-68 263.8 182 77.5
CSS0032425 Camellia sinensis var. sinensis HOM05D007184 ORTHO05D008987 1.5e-68 263.5 229 68.1
CSS0036378 Camellia sinensis var. sinensis HOM05D007184 ORTHO05D008987 1.5e-68 263.5 229 68.1
Lj3g0025244 Lotus japonicus HOM05D007184 ORTHO05D008987 2.6e-68 262.7 226 67.3
Haze_09610 Corylus avellana HOM05D007184 ORTHO05D008987 3.4e-68 262.3 219 70.8
Glyma.13G287300 Glycine max HOM05D007184 ORTHO05D008987 3.4e-68 262.3 225 66.7
FvH4_3g21830 Fragaria vesca HOM05D007184 ORTHO05D008987 4.4e-68 261.9 227 67.8
FAN11G2616 Fragaria x ananassa HOM05D007184 ORTHO05D008987 4.4e-68 261.9 227 67.8
TPR.G36807 Trifolium pratense HOM05D007184 ORTHO05D008987 5.8e-68 261.5 230 67.4
FAN21G0378 Fragaria x ananassa HOM05D007184 ORTHO05D008987 9.9e-68 260.8 228 68.9
TAR624G0273 Trochodendron aralioides HOM05D007184 ORTHO05D008987 2.2e-67 259.6 226 68.1
GSVIVG01014606001 Vitis vinifera HOM05D007184 ORTHO05D008987 2.2e-67 259.6 213 69.0
CANSAT11G2419 Cannabis sativa HOM05D007184 ORTHO05D008987 2.9e-67 259.2 229 69.4
Oeu062614.1 Olea europaea HOM05D007184 ORTHO05D008987 2.9e-67 259.2 225 68.4
FAN25G3727 Fragaria x ananassa HOM05D007184 ORTHO05D008987 4.9e-67 258.5 228 68.0
Sabra11G0119700 Salix brachista HOM05D007184 ORTHO05D008987 4.9e-67 258.5 226 68.6
Manes.03G122800 Manihot esculenta HOM05D007184 ORTHO05D008987 1.4e-66 256.9 226 65.9
ClCG10G005800 Citrullus lanatus HOM05D007184 ORTHO05D008987 1.9e-66 256.5 225 65.3
AUR62015645 Chenopodium quinoa HOM05D007184 ORTHO05D008987 4.2e-66 255.4 230 64.3
MD03G1211500 Malus domestica HOM05D007184 ORTHO05D008987 5.4e-66 255.0 228 66.7
Hma1.2p1_1869F.1_g306030 Hydrangea macrophylla HOM05D007184 ORTHO05D008987 1.2e-65 253.8 228 64.0
MELO3C016627.2 Cucumis melo HOM05D007184 ORTHO05D008987 1.6e-65 253.4 225 64.9
Ciclev10009433m.g Citrus clementina HOM05D007184 ORTHO05D008987 2.1e-65 253.1 229 63.8
CsaV3_3G005480 Cucumis sativus L. HOM05D007184 ORTHO05D008987 2.1e-65 253.1 225 64.0
AUR62020554 Chenopodium quinoa HOM05D007184 ORTHO05D008987 2.7e-65 252.7 236 62.7
Potri.011G132900 Populus trichocarpa HOM05D007184 ORTHO05D008987 4.6e-65 251.9 233 65.7
VMungo1080G0323 Vigna mungo HOM05D007184 ORTHO05D008987 7.8e-65 251.1 210 68.6
EL10Ac4g07971 Beta vulgaris HOM05D007184 ORTHO05D008987 1.0e-64 250.8 227 63.4
Psat5g251800 Pisum sativum HOM05D007184 ORTHO05D008987 1.7e-64 250.0 192 72.9
Phvul.005G091600 Phaseolus vulgaris HOM05D007184 ORTHO05D008987 3.0e-64 249.2 225 65.8
Ca_01753_v3 Cicer arietinum L. HOM05D007184 ORTHO05D008987 1.1e-63 247.3 226 65.9
A06p02680 Brassica napus HOM05D007184 ORTHO05D008987 3.3e-63 245.7 227 64.8
BcaC08g43280 Brassica carinata HOM05D007184 ORTHO05D008987 5.6e-63 245.0 227 64.8
C06p06300 Brassica napus HOM05D007184 ORTHO05D008987 5.6e-63 245.0 227 64.8
BolC6t35739H Brassica oleracea HOM05D007184 ORTHO05D008987 5.6e-63 245.0 227 64.8
Nn1g03662 Nelumbo nucifera HOM05D007184 ORTHO05D008987 5.6e-63 245.0 150 87.3
BcaB07g33556 Brassica carinata HOM05D007184 ORTHO05D008987 1.6e-62 243.4 228 64.9
Cpa.g.sc97.69 Carica papaya HOM05D007184 ORTHO05D008987 1.6e-62 243.4 150 86.7
Cc05_g13240 Coffea canephora HOM05D007184 ORTHO05D008987 1.6e-62 243.4 206 67.5
BraA06t23477Z Brassica rapa HOM05D007184 ORTHO05D008987 2.1e-62 243.0 227 63.9
Nitab4.5_0000397g0060 Nicotiana tabacum HOM05D007184 ORTHO05D008987 2.8e-62 242.7 225 64.9
arahy.Tifrunner.gnm1.ann1.538Z4G Arachis hypogaea HOM05D007184 ORTHO05D008987 3.6e-62 242.3 240 60.0
Lsat_1_v5_gn_5_5700 Lactuca sativa HOM05D003993 ORTHO05D005336 6.2e-62 241.5 192 70.3
THA.LOC104817896 Tarenaya hassleriana HOM05D007184 ORTHO05D008987 6.2e-62 241.5 150 84.7
CARHR041120 Cardamine hirsuta HOM05D007184 ORTHO05D008987 1.1e-61 240.7 200 69.5
Sopen07g032240 Solanum pennellii HOM05D007184 ORTHO05D008987 1.4e-61 240.4 210 65.2
Solyc07g064100.1 Solanum lycopersicum HOM05D007184 ORTHO05D008987 1.8e-61 240.0 184 71.2
Thhalv10011779m.g Eutrema salsugineum HOM05D007184 ORTHO05D008987 4.0e-61 238.8 181 72.9
Nitab4.5_0009192g0030 Nicotiana tabacum HOM05D007184 ORTHO05D008987 5.3e-61 238.4 229 64.6
Migut.H01857 Erythranthe guttata HOM05D007184 ORTHO05D008987 1.2e-60 237.3 217 63.1
TWI38G1172 Tripterygium wilfordii HOM05D007184 ORTHO05D008987 1.2e-60 237.3 219 66.2
PGSC0003DMG400019260 Solanum tuberosum HOM05D007184 ORTHO05D008987 1.5e-60 236.9 210 65.2
Sp1g37830 Schrenkiella parvula HOM05D007184 ORTHO05D008987 2.0e-60 236.5 226 64.6
Peaxi162Scf01086g00015 Petunia axillaris HOM05D007184 ORTHO05D008987 9.9e-60 234.2 225 64.4
PGR031G2970 Punica granatum HOM05D007184 ORTHO05D008987 9.9e-60 234.2 189 68.8
AT1G51100 Arabidopsis thaliana HOM05D007184 ORTHO05D008987 2.2e-59 233.0 209 66.5
Carub.0001s4001 Capsella rubella HOM05D007184 ORTHO05D008987 3.8e-59 232.3 185 71.4
QL08p013784 Quercus lobata HOM05D007184 ORTHO05D008987 4.9e-59 231.9 231 64.9
AL1G58900 Arabidopsis lyrata HOM05D007184 ORTHO05D008987 1.1e-58 230.7 184 70.1
HanXRQChr05g0159221 Helianthus annuus HOM05D007184 ORTHO05D008987 5.4e-58 228.4 184 70.7
ECA246G2094 Erigeron canadensis HOM05D003993 ORTHO05D005336 3.5e-57 225.7 203 64.0
ClCG03G004100 Citrullus lanatus HOM05D007184 ORTHO05D008987 4.6e-57 225.3 182 68.1
Atru.BG.150.p Acer truncatum HOM05D007184 ORTHO05D008987 6.0e-57 224.9 166 76.5
PSO541G2827 Papaver somniferum HOM05D007184 ORTHO05D008987 1.0e-56 224.2 228 62.3
PSO675G5359 Papaver somniferum HOM05D007184 ORTHO05D008987 1.9e-55 219.9 228 61.4
SalBow7G0016 Salvia bowleyana HOM05D007184 ORTHO05D008987 5.6e-55 218.4 226 60.6
unitig_52.g17357 Utricularia gibba HOM05D007184 ORTHO05D008987 2.1e-54 216.5 185 65.9
Aa31LG10G3410 Aethionema arabicum HOM05D006358 ORTHO05D008185 1.8e-53 213.4 170 71.2
Aqoxy4G02072 Aquilegia oxysepala HOM05D007184 ORTHO05D008987 1.8e-53 213.4 205 62.4
Lj1P863T33 Lonicera japonica HOM05D007184 ORTHO05D008987 9.0e-53 211.1 195 64.6
MBI12_g14496_MAGBIO Magnolia biondii HOM05D007184 ORTHO05D008987 2.2e-51 206.5 150 74.0
Sed0004555 Sechium edule HOM05D007184 ORTHO05D008987 5.5e-50 201.8 192 60.4
CDE05G0960 Ceratophyllum demersum HOM05D007184 ORTHO05D008987 2.1e-49 199.9 196 61.7
ATR0073G001 Amborella trichopoda HOM05D007184 ORTHO05D008987 7.9e-49 198.0 151 70.9
CDE11G0483 Ceratophyllum demersum HOM05D007184 ORTHO05D008987 2.3e-48 196.4 141 73.0
Os01g0676200 Oryza sativa ssp. japonica HOM05D007184 ORTHO05D008987 7.6e-44 181.4 149 67.1
Eucgr.F03426 Eucalyptus grandis HOM05D007184 ORTHO05D008987 1.7e-43 180.3 118 79.7
Zm00001eb156870 Zea mays HOM05D007184 ORTHO05D008987 1.1e-42 177.6 178 57.3
DCAR_010017 Daucus carota HOM05D007184 ORTHO05D008987 9.6e-39 164.5 107 83.2
EL10Ac1g02068 Beta vulgaris HOM05D007184 ORTHO05D008987 5.9e-36 155.2 102 76.5
QL08p060543 Quercus lobata HOM05D000807 ORTHO05D008987 5.1e-32 142.1 82 93.9
QL08p060183 Quercus lobata HOM05D000807 ORTHO05D008987 3.3e-31 139.4 82 92.7
BcaB07g33555 Brassica carinata HOM05D007184 ORTHO05D008987 1.6e-25 120.6 153 51.6
Nn1g08505 Nelumbo nucifera HOM05D007184 ORTHO05D008987 2.3e-24 116.7 88 70.5
Potri.001G417350 Populus trichocarpa HOM05D007184 ORTHO05D008987 2.2e-22 110.2 73 78.1
Thhalv10012149m.g Eutrema salsugineum HOM05D007184 ORTHO05D008987 4.1e-21 105.9 68 75.0
SEGI_35792 Sequoiadendron giganteum HOM05D007184 ORTHO05D008987 4.1e-21 105.9 114 48.2
Sc03g0008930 Simmondsia chinensis HOM05D007184 ORTHO05D008987 2.7e-17 93.2 102 56.9
Lju3590C0T1 Lonicera japonica HOM05D007184 ORTHO05D008987 5.7e-15 85.5 58 77.6
Pp3c11_19690 Physcomitrium patens HOM05D007184 ORTHO05D008987 2.4e-13 80.1 111 39.6
FvH4_7g08050 Fragaria vesca HOM05D007184 ORTHO05D008987 1.9e-10 70.5 46 78.3
FAN01G2498 Fragaria x ananassa HOM05D007184 ORTHO05D008987 1.9e-10 70.5 46 78.3
CBR_g19283 Chara braunii HOM05D007184 ORTHO05D008987 2.1e-09 67.0 99 36.4
Mapoly0032s0044 Marchantia polymorpha HOM05D007184 ORTHO05D008987 3.6e-09 66.2 107 42.1
FAN06G0875 Fragaria x ananassa HOM05D007184 ORTHO05D008987 2.8e-06 56.6 35 80.0


User provided reference genes

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