Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G176000 Carya illinoinensis HOM05D008666 ORTHO05D009871 2.2e-91 339.0 170 100.0
QL08p018353 Quercus lobata HOM05D010293 ORTHO05D009871 1.2e-28 130.6 160 50.0
Haze_09525 Corylus avellana HOM05D008666 ORTHO05D009871 2.4e-21 106.3 169 43.2
QL93p2023_0047 Quercus lobata HOM05D010293 ORTHO05D009871 1.7e-19 100.1 159 43.4
QL08p018333 Quercus lobata HOM05D010293 ORTHO05D009871 1.1e-18 97.4 226 33.6
Ciclev10009573m.g Citrus clementina HOM05D008666 ORTHO05D009871 4.2e-18 95.5 171 36.8
Dinv08338 Davidia involucrata HOM05D008666 ORTHO05D009871 5.4e-18 95.1 142 40.8
Actinidia18749 Actinidia chinensis HOM05D008666 ORTHO05D009871 1.3e-16 90.5 128 38.3
MBI18_g11118_MAGBIO Magnolia biondii HOM05D008666 ORTHO05D009871 1.3e-16 90.5 139 38.8
QL93p2023_0014 Quercus lobata HOM05D010293 ORTHO05D009871 2.3e-16 89.7 89 56.2
THA.LOC104799910 Tarenaya hassleriana HOM05D008666 ORTHO05D009871 8.7e-16 87.8 144 35.4
Migut.H01908 Erythranthe guttata HOM05D008666 ORTHO05D009871 2.5e-15 86.3 170 33.5
MBI18_g11119_MAGBIO Magnolia biondii HOM05D008666 ORTHO05D009871 2.5e-15 86.3 76 53.9
Oeu008032.1 Olea europaea HOM05D008666 ORTHO05D009871 5.6e-15 85.1 151 33.8
FAN21G2602 Fragaria x ananassa HOM05D001272 ORTHO05D001843 1.3e-14 84.0 184 35.3
Hma1.2p1_1003F.1_g246770 Hydrangea macrophylla HOM05D008666 ORTHO05D009871 3.6e-14 82.4 159 36.5
Prupe.4G189400 Prunus persica HOM05D010293 ORTHO05D009871 3.6e-14 82.4 130 41.5
CANSAT11G1747 Cannabis sativa HOM05D008666 ORTHO05D009871 4.8e-14 82.0 99 42.4
FvH4_3g20890 Fragaria vesca HOM05D010293 ORTHO05D009871 6.2e-14 81.6 184 34.2
FAN11G0092 Fragaria x ananassa HOM05D010293 ORTHO05D009871 6.2e-14 81.6 184 34.2
MBI18_g11116_MAGBIO Magnolia biondii HOM05D008666 ORTHO05D009871 1.4e-13 80.5 92 44.6
Potri.008G084200 Populus trichocarpa HOM05D008666 ORTHO05D009871 3.1e-13 79.3 140 33.6
Oeu030433.2 Olea europaea HOM05D008666 ORTHO05D009871 6.9e-13 78.2 165 34.5
Cc05_g12640 Coffea canephora HOM05D008666 ORTHO05D009871 9.0e-13 77.8 153 32.7
HanXRQChr03g0075931 Helianthus annuus HOM05D008666 ORTHO05D009871 2.6e-12 76.3 128 35.9
Hund16095 Selenicereus undatus HOM05D014664 ORTHO05D009871 1.3e-11 73.9 132 32.6
Cc10_g08880 Coffea canephora HOM05D008666 ORTHO05D009871 3.8e-11 72.4 124 34.7
Prupe.4G189500 Prunus persica HOM05D010293 ORTHO05D009871 3.8e-11 72.4 149 36.9
Thecc.07G071900 Theobroma cacao HOM05D008666 ORTHO05D009871 4.9e-11 72.0 164 38.4
COL.COLO4_09475 Corchorus olitorius HOM05D008666 ORTHO05D009871 1.4e-10 70.5 133 38.3
MD03G1219600 Malus domestica HOM05D010293 ORTHO05D009871 4.2e-10 68.9 124 37.9
MSTRG.14377 Avicennia marina HOM05D008666 ORTHO05D009871 2.1e-09 66.6 98 34.7
Cpa.g.sc80.110 Carica papaya HOM05D048510 ORTHO05D009871 2.7e-09 66.2 130 34.6
Lsat_1_v5_gn_9_95760 Lactuca sativa HOM05D008666 ORTHO05D009871 7.9e-09 64.7 89 40.4
Nn1g06738 Nelumbo nucifera HOM05D008666 ORTHO05D009871 1.8e-08 63.5 89 37.1
QL08p018585 Quercus lobata HOM05D010293 ORTHO05D009871 2.3e-08 63.2 45 64.4
Haze_09524 Corylus avellana HOM05D010293 ORTHO05D009871 2.5e-07 59.7 93 36.6
RcHm_v2.0_Chr5g0035311 Rosa chinensis HOM05D010293 ORTHO05D009871 2.5e-07 59.7 138 34.1
Atru.chr2.2827 Acer truncatum HOM05D038199 ORTHO05D009871 4.3e-07 58.9 193 28.0
Atru.chr2.2828 Acer truncatum HOM05D038199 ORTHO05D009871 9.6e-07 57.8 130 35.4
Manes.01G178300 Manihot esculenta HOM05D008666 ORTHO05D009871 2.1e-06 56.6 137 30.7
Gohir.D13G148800 Gossypium hirsutum HOM05D001272 ORTHO05D001843 6.2e-06 55.1 143 34.3
Peaxi162Scf00000g00503 Petunia axillaris HOM05D008666 ORTHO05D009871 8.1e-06 54.7 168 26.2


User provided reference genes

Program Settings