Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G175700 Carya illinoinensis HOM05D009163 ORTHO05D010445 2.6e-116 422.5 301 100.0
CiPaw.01G040400 Carya illinoinensis HOM05D009163 ORTHO05D010445 1.9e-98 363.2 301 90.7
vmacro17825 Vaccinium macrocarpon HOM05D009163 ORTHO05D010445 4.8e-25 119.4 313 51.8
Dinv13520 Davidia involucrata HOM05D009163 ORTHO05D010445 8.4e-22 108.6 172 44.2
Actinidia19192 Actinidia chinensis HOM05D009163 ORTHO05D010445 1.9e-21 107.5 359 39.0
QL06p046412 Quercus lobata HOM05D009163 ORTHO05D010445 3.9e-19 99.8 176 38.6
Nitab4.5_0000344g0220 Nicotiana tabacum HOM05D012291 ORTHO05D010445 5.6e-18 95.9 188 37.8
Manes.01G135700 Manihot esculenta HOM05D009163 ORTHO05D010445 2.8e-17 93.6 164 40.2
Rhsim08G0118300 Rhododendron simsii HOM05D009163 ORTHO05D010445 4.0e-16 89.7 175 35.4
RhsimUnG0100100 Rhododendron simsii HOM05D009163 ORTHO05D010445 4.0e-16 89.7 175 35.4
Potri.005G122400 Populus trichocarpa HOM05D009163 ORTHO05D010445 5.3e-16 89.4 92 47.8
Potri.007G024000 Populus trichocarpa HOM05D009163 ORTHO05D010445 9.0e-16 88.6 188 34.0
Sabra05G0100500 Salix brachista HOM05D009163 ORTHO05D010445 9.0e-16 88.6 188 35.1
GSVIVG01018946001 Vitis vinifera HOM05D009163 ORTHO05D010445 9.9e-15 85.1 176 35.8
Glyma.11G068900 Glycine max HOM05D013452 ORTHO05D013216 1.7e-14 84.3 310 35.5
MD02G1146200 Malus domestica HOM05D028013 ORTHO05D010445 3.5e-12 76.6 170 32.9
Oeu042269.2 Olea europaea HOM05D009163 ORTHO05D010445 4.6e-12 76.3 127 33.9
FAN23G2557 Fragaria x ananassa HOM05D018124 ORTHO05D019096 1.8e-11 74.3 122 38.5
CsaV3_4G005610 Cucumis sativus L. HOM05D015520 ORTHO05D010445 2.3e-11 73.9 172 32.0
FvH4_1g13160 Fragaria vesca HOM05D018124 ORTHO05D019096 2.3e-11 73.9 122 37.7
FAN19G0771 Fragaria x ananassa HOM05D018124 ORTHO05D019096 2.3e-11 73.9 122 37.7
Prupe.7G155800 Prunus persica HOM05D028013 ORTHO05D010445 2.3e-11 73.9 170 37.1
TWI09G1297 Tripterygium wilfordii HOM05D009163 ORTHO05D010445 5.1e-11 72.8 88 46.6
MELO3C016387.2 Cucumis melo HOM05D015520 ORTHO05D010445 1.1e-10 71.6 112 41.1
Prupe.I002400 Prunus persica HOM05D028013 ORTHO05D010445 1.1e-10 71.6 213 34.7
THA.LOC104807843 Tarenaya hassleriana HOM05D009606 ORTHO05D011759 1.5e-10 71.2 327 26.9
Migut.H00982 Erythranthe guttata HOM05D009163 ORTHO05D010445 1.9e-10 70.9 98 39.8
RcHm_v2.0_Chr2g0101381 Rosa chinensis HOM05D018124 ORTHO05D019096 4.3e-10 69.7 122 38.5
arahy.Tifrunner.gnm1.ann1.JE9L1P Arachis hypogaea HOM05D026528 ORTHO05D013216 5.6e-10 69.3 149 36.9
MSTRG.15269 Avicennia marina HOM05D009163 ORTHO05D010445 8.2e-09 65.5 97 42.3
PSO541G2773 Papaver somniferum HOM05D009163 ORTHO05D010445 1.8e-08 64.3 97 38.1
Oeu033653.1 Olea europaea HOM05D009163 ORTHO05D010445 2.4e-08 63.9 87 39.1
PSO675G5326 Papaver somniferum HOM05D009163 ORTHO05D010445 3.1e-08 63.5 82 41.5
Aqoxy6G01129 Aquilegia oxysepala HOM05D009163 ORTHO05D010445 9.0e-08 62.0 122 33.6
COL.COLO4_22063 Corchorus olitorius HOM05D019098 ORTHO05D013216 9.0e-08 62.0 123 37.4
Nitab4.5_0000178g0120 Nicotiana tabacum HOM05D012291 ORTHO05D010445 9.0e-08 62.0 92 39.1
arahy.Tifrunner.gnm1.ann1.32CIDB Arachis hypogaea HOM05D026528 ORTHO05D013216 2.0e-07 60.8 162 30.9
VMungo1077G0001 Vigna mungo HOM05D013452 ORTHO05D013216 2.0e-07 60.8 40 77.5
FAN28G1327 Fragaria x ananassa HOM05D018124 ORTHO05D019096 2.6e-07 60.5 99 41.4
FAN28G1332 Fragaria x ananassa HOM05D018124 ORTHO05D019096 2.6e-07 60.5 99 41.4
CSS0029219 Camellia sinensis var. sinensis HOM05D009163 ORTHO05D010445 3.4e-07 60.1 108 34.3
MELO3C016385.2 Cucumis melo HOM05D015520 ORTHO05D010445 3.4e-07 60.1 101 34.7
Thecc.01G034000 Theobroma cacao HOM05D019098 ORTHO05D025280 4.5e-07 59.7 44 70.5
Aqoxy5G01607 Aquilegia oxysepala HOM05D009163 ORTHO05D010445 5.8e-07 59.3 100 39.0
Duzib147G1474 Durio zibethinus HOM05D019098 ORTHO05D019096 7.6e-07 58.9 284 40.8
Lalb_Chr09g0322311 Lupinus albus HOM05D013452 ORTHO05D013216 7.6e-07 58.9 46 67.4
FAN26G1512 Fragaria x ananassa HOM05D018124 ORTHO05D019096 1.3e-06 58.2 41 68.3
Eucgr.I02433 Eucalyptus grandis HOM05D009163 ORTHO05D013216 1.7e-06 57.8 47 63.8
Cc07_g09620 Coffea canephora HOM05D009163 ORTHO05D010445 3.8e-06 56.6 47 61.7
Duzib187G1372 Durio zibethinus HOM05D019098 ORTHO05D025280 6.5e-06 55.8 46 65.2
Nitab4.5_0003232g0030 Nicotiana tabacum HOM05D012291 ORTHO05D010445 6.5e-06 55.8 132 31.8
Sed0008948 Sechium edule HOM05D015520 ORTHO05D010445 6.5e-06 55.8 174 31.0
PGSC0003DMG400003600 Solanum tuberosum HOM05D012291 ORTHO05D010445 6.5e-06 55.8 67 41.8


User provided reference genes

Program Settings