Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G175500 Carya illinoinensis HOM05D000461 ORTHO05D009042 7.9e-135 483.8 246 100.0
QL08p018706 Quercus lobata HOM05D000461 ORTHO05D009042 5.0e-105 384.8 249 80.3
QL93p2023_0091 Quercus lobata HOM05D000461 ORTHO05D009042 5.5e-104 381.3 249 79.5
Cfa020516 Carpinus fangiana HOM05D000461 ORTHO05D009768 1.1e-99 367.1 235 79.6
Dinv08335 Davidia involucrata HOM05D000461 ORTHO05D009042 3.9e-94 348.6 256 71.5
Prupe.4G189000 Prunus persica HOM05D000461 ORTHO05D009042 2.2e-89 332.8 248 69.8
CSS0025788 Camellia sinensis var. sinensis HOM05D000461 ORTHO05D009042 1.5e-88 330.1 253 66.8
Dinv22369 Davidia involucrata HOM05D000461 ORTHO05D009042 9.4e-88 327.4 256 69.9
RcHm_v2.0_Chr5g0035191 Rosa chinensis HOM05D000461 ORTHO05D009042 9.7e-85 317.4 248 67.3
Hma1.2p1_1003F.1_g246730 Hydrangea macrophylla HOM05D000461 ORTHO05D009042 1.8e-83 313.2 216 75.9
Ca_29614_v3 Cicer arietinum L. HOM05D000461 ORTHO05D009042 1.6e-82 310.1 249 63.1
CANSAT11G1238 Cannabis sativa HOM05D000461 ORTHO05D009042 2.7e-82 309.3 253 64.4
FAN21G1502 Fragaria x ananassa HOM05D000461 ORTHO05D009042 2.9e-81 305.8 248 65.7
Glyma.13G281300 Glycine max HOM05D000461 ORTHO05D009042 8.5e-81 304.3 247 65.6
Lalb_Chr25g0286691 Lupinus albus HOM05D000461 ORTHO05D009042 1.5e-80 303.5 246 62.6
Psat5g246400 Pisum sativum HOM05D000461 ORTHO05D009042 1.9e-80 303.1 247 63.6
Glyma.12G220000 Glycine max HOM05D000461 ORTHO05D009042 3.2e-80 302.4 248 66.5
FAN16G2536 Fragaria x ananassa HOM05D000461 ORTHO05D009042 7.2e-80 301.2 253 63.6
Medtr2g080290 Medicago truncatula HOM05D000461 ORTHO05D009042 7.2e-80 301.2 247 63.6
Lalb_Chr01g0017011 Lupinus albus HOM05D000461 ORTHO05D009042 9.4e-80 300.8 248 62.5
Phvul.005G086500 Phaseolus vulgaris HOM05D000461 ORTHO05D009042 1.6e-79 300.1 249 63.1
Cpa.g.sc80.106 Carica papaya HOM05D000461 ORTHO05D009042 2.1e-79 299.7 253 65.6
Potri.001G405800 Populus trichocarpa HOM05D000461 ORTHO05D009042 2.1e-79 299.7 254 64.6
Ciclev10009303m.g Citrus clementina HOM05D000461 ORTHO05D009042 3.6e-79 298.9 251 65.7
TWI39G0508 Tripterygium wilfordii HOM05D000461 ORTHO05D009042 4.7e-79 298.5 249 65.9
Eucgr.F03352 Eucalyptus grandis HOM05D000461 ORTHO05D009042 1.8e-78 296.6 214 72.9
FAN11G0265 Fragaria x ananassa HOM05D000461 ORTHO05D009042 1.8e-78 296.6 255 63.9
Manes.03G116000 Manihot esculenta HOM05D000461 ORTHO05D009042 1.8e-78 296.6 257 66.1
Nn1g03924 Nelumbo nucifera HOM05D000461 ORTHO05D009042 4.0e-78 295.4 242 66.5
Atru.chr2.2831 Acer truncatum HOM05D000461 ORTHO05D009042 8.8e-78 294.3 256 62.9
Duzib213G0849 Durio zibethinus HOM05D000461 ORTHO05D009042 1.5e-77 293.5 257 63.4
Sabra16G0269500 Salix brachista HOM05D000461 ORTHO05D009042 2.0e-77 293.1 280 59.6
MD11G1238100 Malus domestica HOM05D000461 ORTHO05D009042 2.8e-76 289.3 255 63.1
Rhsim04G0018200 Rhododendron simsii HOM05D000461 ORTHO05D009042 4.8e-76 288.5 263 60.1
Sabra16G0267700 Salix brachista HOM05D000461 ORTHO05D009042 6.3e-76 288.1 282 58.9
Thecc.07G072900 Theobroma cacao HOM05D000461 ORTHO05D009042 8.3e-76 287.7 254 62.6
TPR.G32851 Trifolium pratense HOM05D000461 ORTHO05D009042 7.0e-75 284.6 251 62.5
MD03G1219800 Malus domestica HOM05D000461 ORTHO05D009042 1.3e-73 280.4 254 61.0
PGR031G2091 Punica granatum HOM05D000461 ORTHO05D009042 1.3e-73 280.4 254 61.8
ClCG10G006570 Citrullus lanatus HOM05D000461 ORTHO05D009042 1.5e-72 276.9 227 63.4
COL.COLO4_09469 Corchorus olitorius HOM05D000461 ORTHO05D009768 9.4e-72 274.2 212 67.9
Cc05_g12620 Coffea canephora HOM05D000461 ORTHO05D009042 1.2e-71 273.9 254 63.0
Solyc07g063530.3 Solanum lycopersicum HOM05D000461 ORTHO05D009042 3.6e-71 272.3 257 56.4
Nitab4.5_0000297g0040 Nicotiana tabacum HOM05D000461 ORTHO05D009042 2.3e-70 269.6 265 58.9
Sed0008890 Sechium edule HOM05D000461 ORTHO05D009042 8.8e-70 267.7 244 60.7
Lj3g0027305 Lotus japonicus HOM05D000461 ORTHO05D009042 1.2e-69 267.3 230 64.3
TAR626G1568 Trochodendron aralioides HOM05D000461 ORTHO05D009042 1.2e-69 267.3 251 59.4
CsaV3_3G006020 Cucumis sativus L. HOM05D000461 ORTHO05D009042 8.3e-68 261.2 246 58.9
Gohir.A01G068300 Gossypium hirsutum HOM05D000461 ORTHO05D009042 3.1e-67 259.2 258 57.4
THA.LOC104799911 Tarenaya hassleriana HOM05D000461 ORTHO05D009042 7.0e-67 258.1 185 71.4
Actinidia18752 Actinidia chinensis HOM05D000461 ORTHO05D009042 1.2e-66 257.3 229 63.3
arahy.Tifrunner.gnm1.ann1.20QRXD Arachis hypogaea HOM05D000461 ORTHO05D009042 2.7e-66 256.1 235 60.4
MSTRG.15210 Avicennia marina HOM05D000461 ORTHO05D009042 3.5e-66 255.8 260 58.1
arahy.Tifrunner.gnm1.ann1.IDBP1F Arachis hypogaea HOM05D000461 ORTHO05D009042 5.9e-66 255.0 236 61.9
Ah.04g164980 Amaranthus hybridus HOM05D000461 ORTHO05D009042 7.7e-66 254.6 224 60.7
Haze_09518 Corylus avellana HOM05D000461 ORTHO05D009042 7.7e-66 254.6 275 54.5
Sc03g0009630 Simmondsia chinensis HOM05D000461 ORTHO05D009042 3.8e-65 252.3 239 58.2
Thhalv10026109m.g Eutrema salsugineum HOM05D000461 ORTHO05D009042 3.3e-64 249.2 220 60.9
Sp7g25320 Schrenkiella parvula HOM05D000461 ORTHO05D009042 3.3e-64 249.2 232 59.1
Aqoxy1G02771 Aquilegia oxysepala HOM05D000461 ORTHO05D009042 1.2e-63 247.3 216 63.0
Nitab4.5_0002565g0040 Nicotiana tabacum HOM05D000461 ORTHO05D009042 1.2e-63 247.3 241 58.5
Sopen07g031710 Solanum pennellii HOM05D000461 ORTHO05D009042 1.2e-63 247.3 170 70.0
BcaC06g32696 Brassica carinata HOM05D000461 ORTHO05D009042 1.6e-63 246.9 213 62.0
BolC7t46022H Brassica oleracea HOM05D000461 ORTHO05D009042 6.1e-63 245.0 213 61.5
Gohir.D01G055600 Gossypium hirsutum HOM05D000461 ORTHO05D009042 6.1e-63 245.0 261 54.0
Gorai.002G075700 Gossypium raimondii HOM05D000461 ORTHO05D009042 6.1e-63 245.0 264 53.8
Migut.M00872 Erythranthe guttata HOM05D000461 ORTHO05D009042 1.4e-62 243.8 267 53.6
Lsat_1_v5_gn_7_106400 Lactuca sativa HOM05D000461 ORTHO05D009042 1.4e-62 243.8 180 71.1
C07p55420 Brassica napus HOM05D000461 ORTHO05D009042 2.3e-62 243.0 213 61.0
A03p57230 Brassica napus HOM05D000461 ORTHO05D009042 3.0e-62 242.7 212 62.3
BraA03t14789Z Brassica rapa HOM05D000461 ORTHO05D009042 3.0e-62 242.7 212 62.3
AT4G27390 Arabidopsis thaliana HOM05D000461 ORTHO05D009042 5.2e-62 241.9 227 58.1
FvH4_3g20860 Fragaria vesca HOM05D000461 ORTHO05D009042 1.5e-61 240.4 202 63.4
CARHR235060 Cardamine hirsuta HOM05D000461 ORTHO05D009042 2.6e-61 239.6 202 60.4
Carub.0007s1348 Capsella rubella HOM05D000461 ORTHO05D009042 4.4e-61 238.8 213 58.2
SGA_v2.0_scaffold73G24312 Striga asiatica HOM05D000461 ORTHO05D009042 7.5e-61 238.0 258 54.7
vmacro09553 Vaccinium macrocarpon HOM05D000461 ORTHO05D009042 4.9e-60 235.3 352 44.6
GSVIVG01014422001 Vitis vinifera HOM05D000461 ORTHO05D009042 6.4e-60 235.0 148 76.4
Aa31LG5G10130 Aethionema arabicum HOM05D000461 ORTHO05D009042 1.4e-59 233.8 215 62.3
CDE05G1014 Ceratophyllum demersum HOM05D000461 ORTHO05D009042 1.4e-59 233.8 255 54.1
Actinidia25643 Actinidia chinensis HOM05D000461 ORTHO05D009042 4.1e-59 232.3 193 64.2
PSO210G3087 Papaver somniferum HOM05D000461 ORTHO05D009042 5.9e-58 228.4 256 53.5
AL7G25410 Arabidopsis lyrata HOM05D000461 ORTHO05D009042 2.3e-57 226.5 213 57.7
Actinidia35273 Actinidia chinensis HOM05D000461 ORTHO05D009042 8.6e-57 224.6 254 54.3
HanXRQChr11g0330871 Helianthus annuus HOM05D000461 ORTHO05D009042 4.3e-56 222.2 175 67.4
Peaxi162Scf01216g00058 Petunia axillaris HOM05D000461 ORTHO05D009042 5.6e-56 221.9 232 53.4
DCAR_013076 Daucus carota HOM05D000461 ORTHO05D009768 3.1e-54 216.1 170 65.9
CSS0035681 Camellia sinensis var. sinensis HOM05D000461 ORTHO05D009042 3.4e-53 212.6 172 68.0
PSO832G2223 Papaver somniferum HOM05D000461 ORTHO05D009042 3.4e-53 212.6 208 55.3
EL10Ac4g08079 Beta vulgaris HOM05D000461 ORTHO05D009042 9.8e-53 211.1 315 43.5
Oeu005436.1 Olea europaea HOM05D000461 ORTHO05D009042 3.5e-50 202.6 125 76.8
ECA236G1699 Erigeron canadensis HOM05D003383 ORTHO05D003890 1.0e-49 201.1 142 68.3
AUR62029322 Chenopodium quinoa HOM05D000461 ORTHO05D009042 8.3e-44 181.4 230 49.1
AUR62015609 Chenopodium quinoa HOM05D000461 ORTHO05D009042 1.9e-43 180.3 258 48.8
MELO3C016549.2 Cucumis melo HOM05D000461 ORTHO05D009042 4.1e-43 179.1 169 53.8
VMungo1080G0679 Vigna mungo HOM05D000461 ORTHO05D009042 7.1e-43 178.3 164 56.7
Hund28424 Selenicereus undatus HOM05D000461 ORTHO05D009042 2.1e-42 176.8 208 51.0
Hund28429 Selenicereus undatus HOM05D000461 ORTHO05D009042 2.1e-42 176.8 208 51.0
Os05g0502500 Oryza sativa ssp. japonica HOM05D000461 ORTHO05D009042 7.3e-40 168.3 186 52.7
HPP92_001809 Vanilla planifolia HOM05D000461 ORTHO05D009042 8.1e-39 164.9 124 62.9
Zm00001eb352790 Zea mays HOM05D000461 ORTHO05D009042 3.1e-38 162.9 161 52.2
RcHm_v2.0_Chr5g0035211 Rosa chinensis HOM05D000461 ORTHO05D009042 3.8e-36 156.0 109 69.7
Mapoly0059s0039 Marchantia polymorpha HOM05D000461 ORTHO05D009042 6.0e-34 148.7 161 48.4
PGSC0003DMG400019287 Solanum tuberosum HOM05D000461 ORTHO05D009042 1.9e-32 143.7 88 70.5
SMO347G0332 Selaginella moellendorffii HOM05D000461 ORTHO05D009042 8.1e-31 138.3 168 42.9
Hma1.2p1_1003F.1_g246740 Hydrangea macrophylla HOM05D000461 ORTHO05D009042 4.0e-30 136.0 87 74.7
Manes.15G162800 Manihot esculenta HOM05D000461 ORTHO05D009042 3.8e-28 129.4 87 73.6
CBR_g3118 Chara braunii HOM05D000461 ORTHO05D009042 4.9e-28 129.0 150 48.0
ATR0693G207 Amborella trichopoda HOM05D000461 ORTHO05D009042 3.0e-25 119.8 87 67.8
Pp3c5_7600 Physcomitrium patens HOM05D000461 ORTHO05D009042 2.5e-24 116.7 228 33.8
unitig_85.g27405 Utricularia gibba HOM05D000461 ORTHO05D009042 9.0e-14 81.6 246 34.6
MBI18_g11113_MAGBIO Magnolia biondii HOM05D000461 ORTHO05D009042 5.1e-09 65.9 88 45.5
FAN25G1192 Fragaria x ananassa HOM05D000461 ORTHO05D009042 2.5e-08 63.5 54 66.7
MELO3C030131.2 Cucumis melo HOM05D004229 ORTHO05D025211 3.7e-07 59.7 92 43.5
MBI13_g45115_MAGBIO Magnolia biondii HOM05D001399 ORTHO05D012970 3.7e-07 59.7 57 64.9
AagrBONN_evm.TU.Sc2ySwM_117.739 Anthoceros agrestis HOM05D000461 ORTHO05D009042 6.9e-06 55.5 72 43.1
Oeu060536.1 Olea europaea HOM05D000396 ORTHO05D000116 6.9e-06 55.5 76 42.1


User provided reference genes

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