Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G171500 Carya illinoinensis HOM05D007784 ORTHO05D008654 8.1e-127 457.2 254 100.0
QL08p022546 Quercus lobata HOM05D007784 ORTHO05D008654 8.3e-63 244.6 237 65.0
Cfa020564 Carpinus fangiana HOM05D007784 ORTHO05D008654 7.0e-62 241.5 241 66.8
CiPaw.12G119800 Carya illinoinensis HOM05D007784 ORTHO05D008654 4.9e-55 218.8 227 69.6
Thecc.07G095100 Theobroma cacao HOM05D007784 ORTHO05D008654 8.3e-47 191.4 241 55.6
Cpa.g.c36086 Carica papaya HOM05D007784 ORTHO05D008654 1.1e-43 181.0 250 55.6
Duzib268G0159 Durio zibethinus HOM05D007784 ORTHO05D008654 1.5e-43 180.6 241 54.4
Gohir.A01G061700 Gossypium hirsutum HOM05D007784 ORTHO05D008654 3.3e-43 179.5 237 55.3
Gohir.D01G048300 Gossypium hirsutum HOM05D007784 ORTHO05D008654 4.3e-43 179.1 239 54.8
Gorai.002G068100 Gossypium raimondii HOM05D007784 ORTHO05D008654 4.3e-43 179.1 239 54.8
Duzib213G0720 Durio zibethinus HOM05D007784 ORTHO05D008654 1.1e-41 174.5 234 55.1
Ciclev10010505m.g Citrus clementina HOM05D007784 ORTHO05D008654 8.9e-41 171.4 244 55.7
COL.COLO4_36703 Corchorus olitorius HOM05D007784 ORTHO05D008654 3.4e-40 169.5 237 53.6
Prupe.4G177000 Prunus persica HOM05D007784 ORTHO05D008654 3.4e-40 169.5 246 58.1
Potri.001G398000 Populus trichocarpa HOM05D007784 ORTHO05D008654 3.7e-39 166.0 248 50.0
FvH4_3g19630 Fragaria vesca HOM05D007784 ORTHO05D008654 1.1e-38 164.5 249 51.0
FAN11G2265 Fragaria x ananassa HOM05D007784 ORTHO05D008654 1.1e-38 164.5 249 51.0
MD03G1230800 Malus domestica HOM05D007784 ORTHO05D008654 1.9e-38 163.7 241 54.8
FAN21G3158 Fragaria x ananassa HOM05D007784 ORTHO05D008654 4.1e-38 162.5 249 51.4
Potri.011G116600 Populus trichocarpa HOM05D007784 ORTHO05D008654 4.6e-37 159.1 262 48.9
ClCG11G017920 Citrullus lanatus HOM05D007784 ORTHO05D008654 3.3e-35 152.9 252 45.6
FAN25G3654 Fragaria x ananassa HOM05D007784 ORTHO05D008654 5.6e-35 152.1 249 49.8
Manes.15G088900 Manihot esculenta HOM05D007784 ORTHO05D008654 2.3e-33 146.7 251 50.6
RcHm_v2.0_Chr5g0032821 Rosa chinensis HOM05D007784 ORTHO05D008654 5.2e-33 145.6 249 44.2
Lalb_Chr03g0030731 Lupinus albus HOM05D007784 ORTHO05D008654 8.9e-33 144.8 245 48.2
Sabra11G0102100 Salix brachista HOM05D007784 ORTHO05D008654 8.9e-33 144.8 245 46.9
Atru.chr2.2433 Acer truncatum HOM05D007784 ORTHO05D008654 2.0e-32 143.7 282 47.9
Sabra16G0260800 Salix brachista HOM05D007784 ORTHO05D008654 2.0e-32 143.7 243 46.1
FAN16G2579 Fragaria x ananassa HOM05D007784 ORTHO05D008654 2.6e-32 143.3 237 47.3
Manes.03G106700 Manihot esculenta HOM05D007784 ORTHO05D008654 2.2e-31 140.2 247 50.2
Haze_09448 Corylus avellana HOM05D007784 ORTHO05D008654 3.8e-31 139.4 129 75.2
PGR031G1623 Punica granatum HOM05D007784 ORTHO05D008654 8.4e-31 138.3 248 46.8
CANSAT56G4083 Cannabis sativa HOM05D007784 ORTHO05D008654 4.1e-30 136.0 287 47.0
Gohir.D13G151926 Gossypium hirsutum HOM05D007784 ORTHO05D008654 4.1e-30 136.0 236 51.3
MELO3C025600.2 Cucumis melo HOM05D007784 ORTHO05D008654 1.3e-28 131.0 245 43.7
CsaV3_4G033550 Cucumis sativus L. HOM05D007784 ORTHO05D008654 1.3e-28 131.0 244 45.9
Lj3g0015921 Lotus japonicus HOM05D007784 ORTHO05D008654 3.0e-28 129.8 245 48.6
Psat4g131560 Pisum sativum HOM05D007784 ORTHO05D008654 8.6e-28 128.3 224 41.5
Hma1.2p1_0387F.1_g141980 Hydrangea macrophylla HOM05D007784 ORTHO05D008654 1.1e-27 127.9 241 39.4
CSS0002410 Camellia sinensis var. sinensis HOM05D007784 ORTHO05D008654 4.3e-27 125.9 237 47.3
Actinidia09697 Actinidia chinensis HOM05D007784 ORTHO05D008654 6.2e-26 122.1 225 45.8
Lalb_Chr01g0006591 Lupinus albus HOM05D007784 ORTHO05D008654 8.1e-26 121.7 236 44.1
PGSC0003DMG400012442 Solanum tuberosum HOM05D007784 ORTHO05D008654 8.1e-26 121.7 250 43.2
Aqoxy1G02344 Aquilegia oxysepala HOM05D007784 ORTHO05D008654 5.8e-24 115.5 204 46.6
TAR627G0175 Trochodendron aralioides HOM05D007784 ORTHO05D008654 5.8e-24 115.5 280 41.8
Aqoxy5G00008 Aquilegia oxysepala HOM05D007784 ORTHO05D008654 7.6e-24 115.2 204 46.6
Rhsim06G0201400 Rhododendron simsii HOM05D007784 ORTHO05D008654 2.4e-22 110.2 247 40.1
Gorai.013G169700 Gossypium raimondii HOM05D007784 ORTHO05D008654 3.2e-22 109.8 187 53.5
Phvul.011G165000 Phaseolus vulgaris HOM05D007784 ORTHO05D008654 9.3e-22 108.2 238 42.0
Medtr0598s0020 Medicago truncatula HOM05D007784 ORTHO05D008654 1.2e-21 107.8 178 52.8
TAR627G0444 Trochodendron aralioides HOM05D007784 ORTHO05D008654 1.2e-21 107.8 280 38.2
VMungo1127G1039 Vigna mungo HOM05D007784 ORTHO05D008654 1.2e-21 107.8 240 40.0
Glyma.12G163035 Glycine max HOM05D007784 ORTHO05D008654 2.7e-21 106.7 229 43.2
Duzib170G0657 Durio zibethinus HOM05D007784 ORTHO05D008654 3.5e-21 106.3 226 47.8
MSTRG.15239 Avicennia marina HOM05D007784 ORTHO05D008654 6.0e-21 105.5 226 47.3
CAN.G162.41 Capsicum annuum HOM05D007784 ORTHO05D008654 6.0e-21 105.5 243 37.9
Solyc07g062960.1 Solanum lycopersicum HOM05D007784 ORTHO05D008654 7.8e-21 105.1 230 43.0
Cc05_g11830 Coffea canephora HOM05D007784 ORTHO05D008654 3.0e-20 103.2 238 37.8
Sopen07g031150 Solanum pennellii HOM05D007784 ORTHO05D008654 3.9e-20 102.8 222 43.7
Glyma.06G238300 Glycine max HOM05D007784 ORTHO05D008654 6.6e-20 102.1 236 41.5
Ca_23050_v3 Cicer arietinum L. HOM05D007784 ORTHO05D008654 8.7e-20 101.7 213 39.9
AL3G27640 Arabidopsis lyrata HOM05D009851 ORTHO05D008654 3.3e-19 99.8 225 38.2
Peaxi162Scf00069g01710 Petunia axillaris HOM05D007784 ORTHO05D008654 4.3e-19 99.4 208 37.0
TWI38G0880 Tripterygium wilfordii HOM05D007784 ORTHO05D008654 5.6e-19 99.0 224 35.3
Nn1g04167 Nelumbo nucifera HOM05D007784 ORTHO05D008654 1.3e-18 97.8 231 43.7
PGR083G0236 Punica granatum HOM05D007784 ORTHO05D008654 4.8e-18 95.9 235 35.7
AT3G15250 Arabidopsis thaliana HOM05D009851 ORTHO05D008654 2.4e-17 93.6 226 39.8
Nn1g06458 Nelumbo nucifera HOM05D007784 ORTHO05D008654 3.1e-17 93.2 233 38.2
THA.LOC104810461 Tarenaya hassleriana HOM05D009851 ORTHO05D008654 5.3e-17 92.4 264 33.7
PSO541G4378 Papaver somniferum HOM05D007784 ORTHO05D008654 6.9e-17 92.0 239 41.8
TPR.G18874 Trifolium pratense HOM05D007784 ORTHO05D008654 6.9e-17 92.0 186 41.4
CARHR090230 Cardamine hirsuta HOM05D009851 ORTHO05D008654 9.0e-17 91.7 213 38.5
Dinv14932 Davidia involucrata HOM05D007784 ORTHO05D008654 1.5e-16 90.9 235 33.2
Oeu051079.1 Olea europaea HOM05D007784 ORTHO05D008654 3.4e-16 89.7 229 40.2
Carub.0003s1490 Capsella rubella HOM05D009851 ORTHO05D008654 3.8e-15 86.3 217 42.4
Thhalv10021913m.g Eutrema salsugineum HOM05D009851 ORTHO05D008654 6.4e-15 85.5 212 44.3
Sc16g0007130 Simmondsia chinensis HOM05D007784 ORTHO05D008654 6.4e-15 85.5 239 31.8
Sed0023140 Sechium edule HOM05D007784 ORTHO05D008654 2.4e-14 83.6 58 74.1
Sp3g13450 Schrenkiella parvula HOM05D009851 ORTHO05D008654 4.2e-14 82.8 206 41.3
AUR62036175 Chenopodium quinoa HOM05D007784 ORTHO05D008654 4.6e-13 79.3 252 31.3
C05p51990 Brassica napus HOM05D009851 ORTHO05D008654 1.3e-12 77.8 207 36.7
Migut.M00785 Erythranthe guttata HOM05D007784 ORTHO05D008654 6.7e-12 75.5 218 41.7
AL1G61530 Arabidopsis lyrata HOM05D009851 ORTHO05D008654 1.5e-11 74.3 280 29.6
CARHR043380 Cardamine hirsuta HOM05D009851 ORTHO05D008654 1.5e-11 74.3 266 30.5
AUR62019455 Chenopodium quinoa HOM05D007784 ORTHO05D008654 1.5e-11 74.3 289 34.9
BolC5t33884H Brassica oleracea HOM05D009851 ORTHO05D008654 1.9e-11 73.9 207 35.7
BcaB06g29549 Brassica carinata HOM05D009851 ORTHO05D008654 4.3e-11 72.8 211 40.3
AT1G53163 Arabidopsis thaliana HOM05D009851 ORTHO05D008654 5.6e-11 72.4 290 28.6
BcaB06g29548 Brassica carinata HOM05D009851 ORTHO05D008654 9.6e-11 71.6 207 37.2
A06p01160 Brassica napus HOM05D009851 ORTHO05D008654 9.6e-11 71.6 270 28.5
EL10Ac4g08222 Beta vulgaris HOM05D007784 ORTHO05D008654 2.1e-10 70.5 270 38.5
A05p34230 Brassica napus HOM05D009851 ORTHO05D008654 2.1e-10 70.5 208 37.5
BraA05t22243Z Brassica rapa HOM05D009851 ORTHO05D008654 2.1e-10 70.5 208 37.5
DCAR_017127 Daucus carota HOM05D007784 ORTHO05D008654 6.2e-10 68.9 202 37.6
BraA06t23343Z Brassica rapa HOM05D009851 ORTHO05D008654 8.1e-10 68.6 269 28.6
Carub.0001s4232 Capsella rubella HOM05D009851 ORTHO05D008654 8.1e-10 68.6 69 53.6
Thhalv10012165m.g Eutrema salsugineum HOM05D009851 ORTHO05D008654 1.4e-09 67.8 289 32.2
BcaC08g43508 Brassica carinata HOM05D009851 ORTHO05D008654 3.1e-09 66.6 262 27.5
C06p08940 Brassica napus HOM05D009851 ORTHO05D008654 3.1e-09 66.6 262 27.5
BolC6t35972H Brassica oleracea HOM05D009851 ORTHO05D008654 3.1e-09 66.6 262 27.5
BcaB03g11679 Brassica carinata HOM05D009851 ORTHO05D008654 9.0e-09 65.1 59 61.0
Sp1g39710 Schrenkiella parvula HOM05D009851 ORTHO05D008654 5.8e-08 62.4 82 50.0
BcaB07g33353 Brassica carinata HOM05D009851 ORTHO05D008654 1.3e-07 61.2 274 30.7
Ah.06g184500 Amaranthus hybridus HOM05D007784 ORTHO05D008654 6.4e-07 58.9 262 29.0
Rhsim04G0022200 Rhododendron simsii HOM05D058066 ORTHO05D008654 3.2e-06 56.6 84 45.2
ECA234G3343 Erigeron canadensis HOM05D007784 ORTHO05D008654 5.5e-06 55.8 218 31.7
SalBow8G3696 Salvia bowleyana HOM05D007784 ORTHO05D008654 5.5e-06 55.8 81 48.1


User provided reference genes

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