Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G165400 Carya illinoinensis HOM05D006017 ORTHO05D007821 3.7e-287 990.7 457 100.0
CiPaw.12G115700 Carya illinoinensis HOM05D006017 ORTHO05D007821 1.8e-257 892.1 448 90.2
Cfa019614 Carpinus fangiana HOM05D006017 ORTHO05D007821 4.2e-251 870.9 447 87.7
Haze_09368 Corylus avellana HOM05D006017 ORTHO05D007821 1.5e-248 862.4 474 83.3
Dinv14956 Davidia involucrata HOM05D006017 ORTHO05D007821 3.1e-246 854.7 456 84.4
TWI38G0439 Tripterygium wilfordii HOM05D006017 ORTHO05D007821 3.6e-242 841.3 446 84.8
Rhsim04G0023700 Rhododendron simsii HOM05D006017 ORTHO05D007821 8.9e-241 836.6 434 86.2
PGSC0003DMG400015330 Solanum tuberosum HOM05D006017 ORTHO05D007821 1.2e-240 836.3 437 85.6
Actinidia18784 Actinidia chinensis HOM05D006017 ORTHO05D007821 2.6e-240 835.1 447 83.9
Hma1.2p1_0416F.1_g148570 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 1.3e-239 832.8 434 86.9
CSS0036883 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 2.2e-239 832.0 434 85.5
Sopen12g005880 Solanum pennellii HOM05D006017 ORTHO05D007821 2.9e-239 831.6 437 84.9
Atru.chr2.2344 Acer truncatum HOM05D006017 ORTHO05D007821 4.9e-239 830.9 442 84.8
Solyc12g014100.2 Solanum lycopersicum HOM05D006017 ORTHO05D007821 4.9e-239 830.9 437 84.7
Cpa.g.sc131.80 Carica papaya HOM05D006017 ORTHO05D007821 2.4e-238 828.6 443 84.4
MSTRG.14945 Avicennia marina HOM05D006017 ORTHO05D007821 5.4e-238 827.4 434 84.8
Peaxi162Scf00000g00262 Petunia axillaris HOM05D006017 ORTHO05D007821 7.0e-238 827.0 437 84.7
Prupe.4G172100 Prunus persica HOM05D006017 ORTHO05D007821 2.7e-237 825.1 448 83.5
vmacro09508 Vaccinium macrocarpon HOM05D006017 ORTHO05D007821 2.7e-237 825.1 460 81.5
Lj8A152T86 Lonicera japonica HOM05D006017 ORTHO05D007821 4.6e-237 824.3 448 83.7
QL08p027671 Quercus lobata HOM05D006017 ORTHO05D007821 7.8e-237 823.5 442 85.3
PGR083G0123 Punica granatum HOM05D006017 ORTHO05D007821 1.3e-236 822.8 453 80.8
Migut.M00760 Erythranthe guttata HOM05D006017 ORTHO05D007821 1.7e-236 822.4 447 83.0
Manes.03G103900 Manihot esculenta HOM05D006017 ORTHO05D007821 2.3e-236 822.0 452 81.6
Cc05_g11510 Coffea canephora HOM05D006017 ORTHO05D007821 3.9e-236 821.2 432 84.3
ClCG07G009900 Citrullus lanatus HOM05D006017 ORTHO05D007821 8.6e-236 820.1 448 82.4
FAN11G3087 Fragaria x ananassa HOM05D006017 ORTHO05D007821 8.6e-236 820.1 451 82.3
MBI07_g06432_MAGBIO Magnolia biondii HOM05D006017 ORTHO05D007821 1.5e-235 819.3 437 84.0
GSVIVG01014248001 Vitis vinifera HOM05D006017 ORTHO05D007821 3.3e-235 818.1 447 83.2
RcHm_v2.0_Chr5g0031821 Rosa chinensis HOM05D006017 ORTHO05D007821 4.3e-235 817.8 447 81.9
Gorai.002G065000 Gossypium raimondii HOM05D006017 ORTHO05D007821 7.3e-235 817.0 452 82.3
Sed0020976 Sechium edule HOM05D006017 ORTHO05D007821 9.5e-235 816.6 447 82.1
CsaV3_4G008430 Cucumis sativus L. HOM05D006017 ORTHO05D007821 2.8e-234 815.1 448 81.7
Gohir.D01G045400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 2.8e-234 815.1 452 82.1
FAN16G2700 Fragaria x ananassa HOM05D006017 ORTHO05D007821 4.7e-234 814.3 448 81.9
Gohir.A01G059400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 4.7e-234 814.3 443 83.1
ECA240G4517 Erigeron canadensis HOM05D006017 ORTHO05D007821 1.4e-233 812.8 437 83.1
CANSAT35G1773 Cannabis sativa HOM05D006017 ORTHO05D007821 1.8e-233 812.4 432 84.5
Eucgr.F01184 Eucalyptus grandis HOM05D006017 ORTHO05D007821 1.8e-233 812.4 431 83.8
Phvul.011G148800 Phaseolus vulgaris HOM05D006017 ORTHO05D007821 2.3e-233 812.0 432 84.5
Lsat_1_v5_gn_9_98620 Lactuca sativa HOM05D006017 ORTHO05D007821 3.1e-233 811.6 445 81.8
MELO3C016089.2 Cucumis melo HOM05D006017 ORTHO05D007821 4.0e-233 811.2 448 81.7
Thecc.07G102400 Theobroma cacao HOM05D006017 ORTHO05D007821 4.0e-233 811.2 448 81.9
EL10Ac4g08290 Beta vulgaris HOM05D006017 ORTHO05D007821 4.4e-232 807.7 436 81.4
Eucgr.F01185 Eucalyptus grandis HOM05D006017 ORTHO05D007821 5.8e-232 807.4 431 83.3
CAN.G739.4 Capsicum annuum HOM05D006017 ORTHO05D007821 9.8e-232 806.6 475 77.9
HanXRQChr03g0070991 Helianthus annuus HOM05D006017 ORTHO05D007821 2.9e-231 805.1 438 82.9
Sc03g0010290 Simmondsia chinensis HOM05D006017 ORTHO05D007821 3.7e-231 804.7 434 82.7
Aqoxy1G02214 Aquilegia oxysepala HOM05D006017 ORTHO05D007821 4.9e-231 804.3 432 83.6
Oeu061327.1 Olea europaea HOM05D006017 ORTHO05D007821 6.4e-231 803.9 483 76.4
Oeu061328.1 Olea europaea HOM05D006017 ORTHO05D007821 6.4e-231 803.9 483 76.4
Glyma.12G158600 Glycine max HOM05D006017 ORTHO05D007821 4.1e-230 801.2 428 83.6
Lj3g0015312 Lotus japonicus HOM05D006017 ORTHO05D007821 4.1e-230 801.2 431 83.8
DCAR_028453 Daucus carota HOM05D006017 ORTHO05D007821 2.7e-229 798.5 430 82.3
PSO541G6385 Papaver somniferum HOM05D006017 ORTHO05D007821 3.0e-228 795.0 439 80.9
AUR62019513 Chenopodium quinoa HOM05D006017 ORTHO05D007821 5.0e-228 794.3 452 78.1
FAN21G1753 Fragaria x ananassa HOM05D006017 ORTHO05D007821 5.0e-228 794.3 477 76.7
Medtr8g463280 Medicago truncatula HOM05D006017 ORTHO05D007821 8.6e-228 793.5 438 82.0
VMungo1127G0952 Vigna mungo HOM05D006017 ORTHO05D007821 8.6e-228 793.5 440 81.4
ATR0749G089 Amborella trichopoda HOM05D006017 ORTHO05D007821 1.1e-227 793.1 442 80.3
Psat4g138640 Pisum sativum HOM05D006017 ORTHO05D007821 3.3e-227 791.6 431 83.3
THA.LOC104811882 Tarenaya hassleriana HOM05D006017 ORTHO05D007821 4.3e-227 791.2 432 81.9
Lalb_Chr03g0030841 Lupinus albus HOM05D006017 ORTHO05D007821 7.3e-227 790.4 431 82.1
Ca_23058_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 9.5e-227 790.0 431 82.8
Ca_30664_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 9.5e-227 790.0 431 82.8
A02p10590 Brassica napus HOM05D006017 ORTHO05D007821 1.4e-225 786.2 431 81.4
BraA02t06124Z Brassica rapa HOM05D006017 ORTHO05D007821 1.4e-225 786.2 431 81.4
Sp6g16110 Schrenkiella parvula HOM05D006017 ORTHO05D007821 2.3e-225 785.4 431 81.4
AL8G29200 Arabidopsis lyrata HOM05D006017 ORTHO05D007821 3.1e-225 785.0 432 81.5
C02p17670 Brassica napus HOM05D006017 ORTHO05D007821 4.0e-225 784.6 431 81.2
BcaB05g22107 Brassica carinata HOM05D006017 ORTHO05D007821 5.2e-225 784.3 431 81.4
Carub.0008s1436 Capsella rubella HOM05D006017 ORTHO05D007821 6.8e-225 783.9 432 81.0
PSO675G4947 Papaver somniferum HOM05D006017 ORTHO05D007821 1.2e-224 783.1 440 79.8
CARHR267270 Cardamine hirsuta HOM05D006017 ORTHO05D007821 1.5e-224 782.7 431 81.4
Aa31LG3G9950 Aethionema arabicum HOM05D006017 ORTHO05D007821 7.5e-224 780.4 431 80.7
arahy.Tifrunner.gnm1.ann1.DSNA77 Arachis hypogaea HOM05D006017 ORTHO05D007821 9.8e-224 780.0 435 80.2
arahy.Tifrunner.gnm1.ann1.FV2XB3 Arachis hypogaea HOM05D006017 ORTHO05D007821 4.9e-223 777.7 435 80.2
BcaC03g14354 Brassica carinata HOM05D006017 ORTHO05D007821 4.9e-223 777.7 431 80.7
AT5G54080 Arabidopsis thaliana HOM05D006017 ORTHO05D007821 1.1e-222 776.5 432 80.3
BolC2t07897H Brassica oleracea HOM05D006017 ORTHO05D007821 1.1e-222 776.5 431 80.5
Nitab4.5_0003077g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 7.1e-222 773.9 460 77.6
unitig_46.g18314 Utricularia gibba HOM05D006017 ORTHO05D007821 7.8e-221 770.4 454 76.7
Potri.001G374100 Populus trichocarpa HOM05D006017 ORTHO05D007821 1.7e-220 769.2 452 78.5
Sabra16G0246500 Salix brachista HOM05D006017 ORTHO05D007821 1.7e-220 769.2 443 80.1
HPP92_003902 Vanilla planifolia HOM05D006017 ORTHO05D007821 6.6e-220 767.3 444 75.9
AUR62036125 Chenopodium quinoa HOM05D006017 ORTHO05D007821 4.3e-219 764.6 455 75.2
Os06g0103300 Oryza sativa ssp. japonica HOM05D006017 ORTHO05D007821 1.7e-212 742.7 432 77.3
SGA_v2.0_scaffold73G24213 Striga asiatica HOM05D006017 ORTHO05D007821 2.3e-212 742.3 469 73.8
Ciclev10008509m.g Citrus clementina HOM05D006017 ORTHO05D007821 8.1e-210 733.8 390 85.1
Zm00001eb379510 Zea mays HOM05D006017 ORTHO05D007821 1.1e-209 733.4 449 74.2
Nn1g04303 Nelumbo nucifera HOM05D006017 ORTHO05D007821 2.0e-208 729.2 391 84.1
CDE02G3882 Ceratophyllum demersum HOM05D006017 ORTHO05D007821 7.1e-206 720.7 439 73.6
Ah.04g164440 Amaranthus hybridus HOM05D006017 ORTHO05D007821 9.3e-206 720.3 438 74.0
Hund22764 Selenicereus undatus HOM05D006017 ORTHO05D007821 1.2e-197 693.3 404 76.5
Mapoly0078s0002 Marchantia polymorpha HOM05D006017 ORTHO05D007821 1.6e-197 693.0 433 72.5
Pp3c16_940 Physcomitrium patens HOM05D006017 ORTHO05D007821 1.4e-193 679.9 436 70.6
AagrBONN_evm.TU.Sc2ySwM_228.2578 Anthoceros agrestis HOM05D006017 ORTHO05D007821 5.3e-193 677.9 439 70.4
Duzib170G0488 Durio zibethinus HOM05D006017 ORTHO05D007821 7.4e-187 657.5 444 69.8
Thhalv10013691m.g Eutrema salsugineum HOM05D006017 ORTHO05D007821 2.6e-184 649.0 431 69.8
Nitab4.5_0005445g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 2.7e-181 639.0 406 73.4
SMO119G0176 Selaginella moellendorffii HOM05D006017 ORTHO05D007821 4.8e-178 628.2 433 65.8
Hma1.2p1_0416F.1_g148580 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 2.7e-165 585.9 299 87.3
FvH4_3g19020 Fragaria vesca HOM05D006017 ORTHO05D007821 1.5e-163 580.1 319 81.2
Cre02.g091200 Chlamydomonas reinhardtii HOM05D006017 ORTHO05D007821 2.8e-162 575.9 446 61.2
PRCOL_00000185 Prasinoderma coloniale HOM05D006017 ORTHO05D007821 3.4e-160 568.9 454 61.0
TPR.G22540 Trifolium pratense HOM05D006017 ORTHO05D007821 1.7e-159 566.6 376 72.3
SalBow8G4076 Salvia bowleyana HOM05D006017 ORTHO05D007821 2.9e-159 565.8 293 84.6
MD03G1237500 Malus domestica HOM05D006017 ORTHO05D007821 5.5e-150 535.0 282 84.4
Glyma.06G234200 Glycine max HOM05D006017 ORTHO05D007821 1.5e-134 483.8 271 80.4
CSS0003418 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 2.7e-80 303.5 189 75.1
MD03G1237300 Malus domestica HOM05D006017 ORTHO05D007821 1.9e-78 297.4 169 79.9
SEGI_01915 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 1.6e-72 277.7 178 70.2
FAN25G2436 Fragaria x ananassa HOM05D006017 ORTHO05D007821 5.8e-67 259.2 132 84.8
Glyma.06G234050 Glycine max HOM05D006017 ORTHO05D007821 1.9e-65 254.2 133 85.0
Rhsim07G0153900 Rhododendron simsii HOM05D006017 ORTHO05D000252 2.5e-65 253.8 216 56.9
Oeu061326.1 Olea europaea HOM05D006017 ORTHO05D007821 3.2e-65 253.4 148 79.7
BcaC04g20394 Brassica carinata HOM05D006017 ORTHO05D007821 5.5e-65 252.7 414 41.8
TAR436G0001 Trochodendron aralioides HOM05D006017 ORTHO05D007821 8.7e-63 245.4 142 77.5
C09p44170 Brassica napus HOM05D006017 ORTHO05D017343 2.8e-61 240.4 216 60.2
Nitab4.5_0004022g0010 Nicotiana tabacum HOM05D006017 ORTHO05D007821 5.3e-60 236.1 120 86.7
TWI38G1497 Tripterygium wilfordii HOM05D006017 ORTHO05D007821 2.1e-48 197.6 119 78.2
CSS0021316 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 2.7e-48 197.2 116 72.4
A10p11370 Brassica napus HOM05D006017 ORTHO05D007821 6.3e-45 186.0 250 47.2
SEGI_25954 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 8.8e-31 139.0 83 72.3
TWI38G0821 Tripterygium wilfordii HOM05D006017 ORTHO05D413584 4.0e-23 113.6 62 80.6
SEGI_23248 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 2.6e-22 110.9 67 68.7
arahy.Tifrunner.gnm1.ann1.EZ2Q4B Arachis hypogaea HOM05D006004 ORTHO05D006976 2.2e-21 107.8 61 78.7
FAN25G2983 Fragaria x ananassa HOM05D006017 ORTHO05D007821 1.1e-20 105.5 85 56.5
BolC9t57289H Brassica oleracea HOM05D006017 ORTHO05D104628 1.8e-20 104.8 181 37.6
CSS0031230 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 3.1e-20 104.0 108 49.1
BraA10t43231Z Brassica rapa HOM05D006017 ORTHO05D017343 4.0e-15 87.0 68 60.3
HPP92_003866 Vanilla planifolia HOM05D006017 ORTHO05D007821 2.9e-10 70.9 65 52.3
Mapoly0432s0001 Marchantia polymorpha HOM05D019566 ORTHO05D017343 1.4e-07 62.0 43 62.8


User provided reference genes

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