Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G160900 Carya illinoinensis HOM05D005597 ORTHO05D007304 0.0e+00 1146.0 575 100.0
QL08p026520 Quercus lobata HOM05D005597 ORTHO05D007304 7.4e-293 1010.0 579 87.4
Cfa019573 Carpinus fangiana HOM05D005597 ORTHO05D007304 1.4e-291 1005.7 576 87.7
Atru.chr2.2174 Acer truncatum HOM05D005597 ORTHO05D007304 2.9e-281 971.5 576 81.9
Gohir.A13G149000 Gossypium hirsutum HOM05D005597 ORTHO05D007304 1.0e-278 963.0 578 81.7
Duzib213G0141 Durio zibethinus HOM05D005597 ORTHO05D007304 5.1e-278 960.7 580 80.3
Gorai.013G173400 Gossypium raimondii HOM05D005597 ORTHO05D007304 5.1e-278 960.7 578 81.3
TAR624G0947 Trochodendron aralioides HOM05D005597 ORTHO05D007304 6.7e-278 960.3 574 82.2
Thecc.07G110000 Theobroma cacao HOM05D005597 ORTHO05D007304 1.9e-277 958.7 578 81.0
Actinidia12571 Actinidia chinensis HOM05D005597 ORTHO05D007304 5.7e-277 957.2 575 81.0
TWI38G1600 Tripterygium wilfordii HOM05D005597 ORTHO05D007304 1.3e-276 956.1 575 81.0
TWI39G1070 Tripterygium wilfordii HOM05D005597 ORTHO05D007304 4.8e-276 954.1 575 81.6
Dinv14987 Davidia involucrata HOM05D005597 ORTHO05D007304 8.2e-276 953.4 573 82.0
Duzib187G0678 Durio zibethinus HOM05D005597 ORTHO05D007304 8.2e-276 953.4 579 80.5
ClCG11G017480 Citrullus lanatus HOM05D005597 ORTHO05D007304 1.4e-275 952.6 574 80.5
Lj8A149T49 Lonicera japonica HOM05D005597 ORTHO05D007304 1.4e-275 952.6 576 80.9
CsaV3_4G033140 Cucumis sativus L. HOM05D005597 ORTHO05D007304 2.4e-275 951.8 575 79.8
TAR626G0744 Trochodendron aralioides HOM05D005597 ORTHO05D007304 1.2e-274 949.5 575 80.9
arahy.Tifrunner.gnm1.ann1.06PSEJ Arachis hypogaea HOM05D005597 ORTHO05D007304 7.7e-274 946.8 575 80.0
arahy.Tifrunner.gnm1.ann1.Z1JPC4 Arachis hypogaea HOM05D005597 ORTHO05D007304 7.7e-274 946.8 575 80.2
PGR083G2138 Punica granatum HOM05D005597 ORTHO05D007304 1.0e-273 946.4 575 80.7
Lalb_Chr01g0006811 Lupinus albus HOM05D005597 ORTHO05D007304 2.2e-273 945.3 570 80.0
Manes.03G102000 Manihot esculenta HOM05D005597 ORTHO05D007304 5.5e-272 940.6 575 79.5
COL.COLO4_17568 Corchorus olitorius HOM05D005597 ORTHO05D007304 2.7e-271 938.3 603 76.8
FvH4_3g18450 Fragaria vesca HOM05D005597 ORTHO05D007304 4.6e-271 937.6 575 79.5
RcHm_v2.0_Chr5g0031201 Rosa chinensis HOM05D005597 ORTHO05D007304 6.1e-271 937.2 578 80.3
Hma1.2p1_1016F.1_g248150 Hydrangea macrophylla HOM05D005597 ORTHO05D007304 1.0e-270 936.4 569 80.5
Nn1g09131 Nelumbo nucifera HOM05D005597 ORTHO05D007304 1.0e-270 936.4 575 79.3
FAN11G3052 Fragaria x ananassa HOM05D005597 ORTHO05D007304 1.4e-270 936.0 575 79.3
Rhsim06G0207300 Rhododendron simsii HOM05D005597 ORTHO05D007304 1.8e-270 935.6 575 79.8
CSS0014594 Camellia sinensis var. sinensis HOM05D005597 ORTHO05D007304 3.0e-270 934.9 572 80.1
FAN21G1763 Fragaria x ananassa HOM05D005597 ORTHO05D007304 3.0e-270 934.9 575 80.2
Prupe.4G166500 Prunus persica HOM05D005597 ORTHO05D007304 6.7e-270 933.7 575 80.5
MD03G1241900 Malus domestica HOM05D005597 ORTHO05D007304 4.3e-269 931.0 580 80.5
Aqoxy1G02067 Aquilegia oxysepala HOM05D005597 ORTHO05D007304 9.7e-269 929.9 576 79.0
Lj3g0024865 Lotus japonicus HOM05D005597 ORTHO05D007304 9.7e-269 929.9 575 77.9
MD11G1261800 Malus domestica HOM05D005597 ORTHO05D007304 9.7e-269 929.9 577 80.2
Glyma.13G270500 Glycine max HOM05D005597 ORTHO05D007304 9.1e-267 923.3 531 82.5
Glyma.12G229300 Glycine max HOM05D005597 ORTHO05D007304 1.5e-266 922.5 531 82.5
Medtr2g076680 Medicago truncatula HOM05D005597 ORTHO05D007304 7.7e-266 920.2 571 77.8
Eucgr.F01228 Eucalyptus grandis HOM05D005597 ORTHO05D007304 1.7e-265 919.1 576 79.9
Ca_03990_v3 Cicer arietinum L. HOM05D005597 ORTHO05D007304 5.0e-265 917.5 577 78.2
FAN16G1691 Fragaria x ananassa HOM05D005597 ORTHO05D007304 5.0e-265 917.5 583 77.4
Ciclev10019496m.g Citrus clementina HOM05D005597 ORTHO05D007304 1.1e-264 916.4 579 77.9
THA.LOC104812323 Tarenaya hassleriana HOM05D005597 ORTHO05D007304 2.5e-264 915.2 575 77.4
Potri.011G110800 Populus trichocarpa HOM05D005597 ORTHO05D007304 7.2e-264 913.7 575 77.6
Sed0009860 Sechium edule HOM05D005597 ORTHO05D007304 1.2e-263 912.9 528 82.8
Phvul.005G066500 Phaseolus vulgaris HOM05D005597 ORTHO05D007304 6.1e-263 910.6 569 77.7
CARHR017370 Cardamine hirsuta HOM05D005597 ORTHO05D007304 5.1e-262 907.5 575 76.0
VMungo1080G1355 Vigna mungo HOM05D005597 ORTHO05D007304 1.5e-261 906.0 569 77.2
GSVIVG01014208001 Vitis vinifera HOM05D005597 ORTHO05D007304 3.3e-261 904.8 514 84.8
Haze_09335 Corylus avellana HOM05D005597 ORTHO05D007304 4.4e-261 904.4 662 73.3
TPR.G19385 Trifolium pratense HOM05D005597 ORTHO05D007304 2.8e-260 901.7 582 75.8
Migut.H01992 Erythranthe guttata HOM05D005597 ORTHO05D007304 1.4e-259 899.4 574 75.1
CAN.G162.8 Capsicum annuum HOM05D005597 ORTHO05D007304 1.8e-259 899.0 573 75.4
BolC5t30227H Brassica oleracea HOM05D005597 ORTHO05D007304 2.4e-259 898.7 572 75.5
Carub.0001s1664 Capsella rubella HOM05D005597 ORTHO05D007304 2.4e-259 898.7 572 76.0
C05p15120 Brassica napus HOM05D005597 ORTHO05D007304 9.1e-259 896.7 572 75.5
BcaB02g06666 Brassica carinata HOM05D005597 ORTHO05D007304 1.2e-258 896.3 572 75.7
MBI07_g03181_MAGBIO Magnolia biondii HOM05D005597 ORTHO05D007304 3.5e-258 894.8 562 77.6
SGA_v2.0_scaffold47G17797 Striga asiatica HOM05D005597 ORTHO05D007304 3.5e-258 894.8 574 75.1
AT1G16900 Arabidopsis thaliana HOM05D005597 ORTHO05D007304 1.0e-257 893.3 572 75.3
AL1G29070 Arabidopsis lyrata HOM05D005597 ORTHO05D007304 1.7e-257 892.5 572 75.5
A06p12800 Brassica napus HOM05D005597 ORTHO05D007304 1.7e-257 892.5 572 75.2
BraA06t24441Z Brassica rapa HOM05D005597 ORTHO05D007304 1.7e-257 892.5 572 75.2
Sp1g15040 Schrenkiella parvula HOM05D005597 ORTHO05D007304 2.9e-257 891.7 572 75.5
PGSC0003DMG400012388 Solanum tuberosum HOM05D005597 ORTHO05D007304 2.9e-257 891.7 573 75.7
MSTRG.12867 Avicennia marina HOM05D005597 ORTHO05D007304 8.5e-257 890.2 573 75.6
BcaC05g25546 Brassica carinata HOM05D005597 ORTHO05D007304 2.5e-256 888.6 567 75.1
Thhalv10007218m.g Eutrema salsugineum HOM05D005597 ORTHO05D007304 3.2e-256 888.3 572 75.0
A08p31230 Brassica napus HOM05D005597 ORTHO05D007304 5.5e-256 887.5 572 75.0
BraA08t35046Z Brassica rapa HOM05D005597 ORTHO05D007304 5.5e-256 887.5 572 75.0
Sabra11G0098300 Salix brachista HOM05D005597 ORTHO05D007304 7.2e-256 887.1 629 71.7
Solyc07g062540.3 Solanum lycopersicum HOM05D005597 ORTHO05D007304 7.2e-256 887.1 573 75.0
Sopen07g030770 Solanum pennellii HOM05D005597 ORTHO05D007304 1.2e-255 886.3 573 75.2
C08p17610 Brassica napus HOM05D005597 ORTHO05D007304 8.0e-255 883.6 572 74.5
BcaC07g38821 Brassica carinata HOM05D005597 ORTHO05D007304 5.2e-254 880.9 568 74.6
vmacro11932 Vaccinium macrocarpon HOM05D005597 ORTHO05D007304 2.2e-252 875.5 601 71.4
BolC8t49386H Brassica oleracea HOM05D005597 ORTHO05D007304 8.2e-252 873.6 550 75.5
Cc05_g11200 Coffea canephora HOM05D005597 ORTHO05D007304 8.2e-252 873.6 514 80.5
FAN25G0069 Fragaria x ananassa HOM05D005597 ORTHO05D007304 1.1e-251 873.2 580 75.2
BcaB03g13027 Brassica carinata HOM05D005597 ORTHO05D007304 3.1e-251 871.7 545 76.0
AUR62043187 Chenopodium quinoa HOM05D005597 ORTHO05D007304 4.5e-250 867.8 577 73.3
CDE02G4663 Ceratophyllum demersum HOM05D005597 ORTHO05D007304 7.7e-250 867.1 574 72.8
Hund10564 Selenicereus undatus HOM05D005597 ORTHO05D007304 1.7e-249 865.9 563 74.6
HanXRQChr14g0442721 Helianthus annuus HOM05D005597 ORTHO05D007304 1.1e-248 863.2 576 73.6
CANSAT35G0471 Cannabis sativa HOM05D005597 ORTHO05D007304 1.9e-248 862.4 534 80.0
ECA240G4584 Erigeron canadensis HOM05D000832 ORTHO05D000982 4.2e-248 861.3 575 73.4
CSS0003229 Camellia sinensis var. sinensis HOM05D005597 ORTHO05D007304 9.4e-248 860.1 573 75.6
Lsat_1_v5_gn_9_100260 Lactuca sativa HOM05D005597 ORTHO05D007304 1.2e-247 859.8 575 72.9
EL10Ac4g08334 Beta vulgaris HOM05D005597 ORTHO05D007304 2.7e-247 858.6 594 71.9
PSO500G0209 Papaver somniferum HOM05D005597 ORTHO05D007304 1.0e-246 856.7 569 73.6
PSO675G3712 Papaver somniferum HOM05D005597 ORTHO05D007304 1.0e-246 856.7 569 73.6
ATR0602G238 Amborella trichopoda HOM05D005597 ORTHO05D007304 2.9e-241 838.6 576 72.2
Aa31LG7G1320 Aethionema arabicum HOM05D005597 ORTHO05D007304 8.0e-239 830.5 563 73.5
Os01g0209000 Oryza sativa ssp. japonica HOM05D005597 ORTHO05D007304 3.4e-237 825.1 529 73.9
Zm00001eb120330 Zea mays HOM05D005597 ORTHO05D007304 7.5e-237 823.9 571 70.6
unitig_749.g13539 Utricularia gibba HOM05D005597 ORTHO05D007304 8.3e-236 820.5 574 70.0
SalBow7G0883 Salvia bowleyana HOM05D005597 ORTHO05D007304 2.3e-225 785.8 502 75.7
Duzib213G0888 Durio zibethinus HOM05D005597 ORTHO05D007304 3.1e-222 775.4 448 82.8
HPP92_004052 Vanilla planifolia HOM05D005597 ORTHO05D007304 8.9e-214 747.3 615 62.3
AUR62019570 Chenopodium quinoa HOM05D005597 ORTHO05D007304 4.1e-211 738.4 575 65.6
MELO3C025637.2 Cucumis melo HOM05D005597 ORTHO05D007304 3.0e-209 732.3 435 80.7
Gohir.D13G153500 Gossypium hirsutum HOM05D005597 ORTHO05D007304 2.1e-207 726.1 408 83.8
Peaxi162Scf00069g02235 Petunia axillaris HOM05D005597 ORTHO05D007304 2.1e-207 726.1 437 78.9
DCAR_013152 Daucus carota HOM05D005597 ORTHO05D007304 6.0e-202 708.0 439 78.4
Hma1.2p1_1016F.1_g248140 Hydrangea macrophylla HOM05D005597 ORTHO05D007304 1.1e-195 687.2 436 79.4
Psat5g238320 Pisum sativum HOM05D005597 ORTHO05D007304 4.6e-186 655.2 432 75.9
Sc03g0010510 Simmondsia chinensis HOM05D005597 ORTHO05D007304 7.3e-184 647.9 438 73.7
Mapoly0059s0091 Marchantia polymorpha HOM05D005597 ORTHO05D007304 4.5e-181 638.6 541 58.6
Ah.06g185290 Amaranthus hybridus HOM05D005597 ORTHO05D007304 2.8e-167 592.8 441 69.4
Dinv18359 Davidia involucrata HOM05D005597 ORTHO05D007304 1.1e-158 564.3 374 77.8
Pp3c6_16240 Physcomitrium patens HOM05D005597 ORTHO05D007304 6.9e-150 535.0 547 51.2
AagrBONN_evm.TU.Sc2ySwM_228.833 Anthoceros agrestis HOM05D005597 ORTHO05D007304 2.2e-148 530.0 531 53.1
SMO143G0166 Selaginella moellendorffii HOM05D005597 ORTHO05D007304 5.1e-145 518.8 516 52.7
CBR_g38668 Chara braunii HOM05D005597 ORTHO05D007304 1.8e-126 457.2 583 43.2
SHI21382 Sapria himalayana HOM05D005597 ORTHO05D007304 7.2e-123 445.3 340 66.2
SHI21385 Sapria himalayana HOM05D000105 ORTHO05D000023 4.9e-95 352.8 220 72.3
Cpa.g.sc97.103 Carica papaya HOM05D005597 ORTHO05D007304 3.2e-94 350.1 213 82.2
Nitab4.5_0001145g0050 Nicotiana tabacum HOM05D005597 ORTHO05D007304 1.7e-92 344.4 281 66.9
Nitab4.5_0000246g0240 Nicotiana tabacum HOM05D005597 ORTHO05D007304 3.1e-89 333.6 587 39.9
Oeu059263.1 Olea europaea HOM05D005597 ORTHO05D007304 2.0e-88 330.9 275 64.4
SEGI_23731 Sequoiadendron giganteum HOM05D005597 ORTHO05D007304 6.2e-82 309.3 223 63.2
MCO07G083 Micromonas commoda HOM05D005597 ORTHO05D007304 7.1e-70 269.2 549 33.9
PRCOL_00005636 Prasinoderma coloniale HOM05D005597 ORTHO05D007304 6.2e-66 256.1 550 33.6
Gohir.A07G160600 Gossypium hirsutum HOM05D005597 ORTHO05D007304 5.1e-60 236.5 148 79.7
Gohir.A04G098250 Gossypium hirsutum HOM05D005597 ORTHO05D007304 4.3e-59 233.4 151 76.2
Cfa025275 Carpinus fangiana HOM05D005597 ORTHO05D028637 9.6e-59 232.3 505 34.3
Gohir.A03G066250 Gossypium hirsutum HOM05D005597 ORTHO05D007304 2.6e-56 224.2 139 79.9
Actinidia09803 Actinidia chinensis HOM05D005597 ORTHO05D007304 9.3e-54 215.7 126 81.0
Atru.chr2.2170 Acer truncatum HOM05D005597 ORTHO05D007304 9.3e-46 189.1 95 85.3
Lsat_1_v5_gn_9_21740 Lactuca sativa HOM05D005597 ORTHO05D007174 2.1e-45 188.0 191 60.7
COL.COLO4_17572 Corchorus olitorius HOM05D005597 ORTHO05D007304 1.4e-38 165.2 138 65.2
Actinidia24363 Actinidia chinensis HOM05D005597 ORTHO05D007304 2.4e-25 121.3 93 68.8
Nn1g04407 Nelumbo nucifera HOM05D005597 ORTHO05D007304 3.6e-21 107.5 74 68.9
MBI01_g45631_MAGBIO Magnolia biondii HOM05D005597 ORTHO05D010488 3.5e-16 90.9 63 61.9
MBI01_g45400_MAGBIO Magnolia biondii HOM05D005597 ORTHO05D010488 5.9e-16 90.1 50 74.0
Potri.001G392050 Populus trichocarpa HOM05D005597 ORTHO05D007304 1.6e-13 82.0 42 88.1
Lsat_1_v5_gn_3_114580 Lactuca sativa HOM05D002100 ORTHO05D002310 2.0e-11 75.1 59 71.2


User provided reference genes

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