Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G160300 Carya illinoinensis HOM05D006614 ORTHO05D008217 0.0e+00 1167.9 613 100.0
Cfa019566 Carpinus fangiana HOM05D006614 ORTHO05D008217 1.4e-241 839.7 619 75.4
Haze_09323 Corylus avellana HOM05D006614 ORTHO05D008217 7.2e-238 827.4 622 73.6
QL12p002313 Quercus lobata HOM05D006614 ORTHO05D008217 4.9e-218 761.5 630 67.9
COL.COLO4_17543 Corchorus olitorius HOM05D006614 ORTHO05D008217 4.9e-210 734.9 614 66.3
Thecc.07G117000 Theobroma cacao HOM05D006614 ORTHO05D008217 2.7e-208 729.2 613 63.8
PGR142G0467 Punica granatum HOM05D006614 ORTHO05D008217 3.9e-207 725.3 630 63.3
Duzib213G0629 Durio zibethinus HOM05D006614 ORTHO05D008217 3.3e-206 722.2 613 65.7
Manes.15G094800 Manihot esculenta HOM05D006614 ORTHO05D008217 2.3e-204 716.1 614 61.7
Gohir.D07G233600 Gossypium hirsutum HOM05D006614 ORTHO05D008217 5.8e-203 711.4 613 65.1
Dinv14994 Davidia involucrata HOM05D006614 ORTHO05D008217 2.2e-202 709.5 635 61.3
MD03G1243600 Malus domestica HOM05D006614 ORTHO05D008217 2.9e-202 709.1 642 60.6
Gorai.001G269000 Gossypium raimondii HOM05D006614 ORTHO05D008217 3.7e-202 708.8 617 64.7
Gohir.A07G226400 Gossypium hirsutum HOM05D006614 ORTHO05D008217 8.3e-202 707.6 613 64.4
Prupe.4G164700 Prunus persica HOM05D006614 ORTHO05D008217 1.4e-201 706.8 635 63.1
Cpa.g.sc77.8 Carica papaya HOM05D006614 ORTHO05D008217 7.1e-201 704.5 628 61.1
GSVIVG01014198001 Vitis vinifera HOM05D006614 ORTHO05D008217 1.6e-200 703.4 617 61.3
FvH4_3g18290 Fragaria vesca HOM05D006614 ORTHO05D008217 2.1e-200 703.0 632 59.5
FAN16G2994 Fragaria x ananassa HOM05D006614 ORTHO05D008217 7.8e-200 701.0 632 59.2
LjContig00141g0022614 Lotus japonicus HOM05D006614 ORTHO05D008217 7.8e-200 701.0 631 62.4
Glyma.14G066300 Glycine max HOM05D006614 ORTHO05D008217 3.9e-199 698.7 567 66.1
RcHm_v2.0_Chr5g0030921 Rosa chinensis HOM05D006614 ORTHO05D008217 5.1e-199 698.4 635 61.6
FAN11G1715 Fragaria x ananassa HOM05D006614 ORTHO05D008217 6.6e-199 698.0 632 58.9
TAR375G0652 Trochodendron aralioides HOM05D006614 ORTHO05D008217 9.5e-198 694.1 659 58.9
Nitab4.5_0006953g0010 Nicotiana tabacum HOM05D006614 ORTHO05D008217 3.1e-196 689.1 628 57.6
TWI38G0322 Tripterygium wilfordii HOM05D006614 ORTHO05D008217 4.0e-196 688.7 620 62.4
CSS0027020 Camellia sinensis var. sinensis HOM05D006614 ORTHO05D008217 8.9e-196 687.6 627 60.6
Peaxi162Scf00111g01423 Petunia axillaris HOM05D006614 ORTHO05D008217 8.9e-196 687.6 624 58.0
Actinidia12578 Actinidia chinensis HOM05D006614 ORTHO05D008217 1.2e-195 687.2 621 57.8
Migut.M00728 Erythranthe guttata HOM05D006614 ORTHO05D008217 1.2e-195 687.2 633 60.3
Sc16g0007600 Simmondsia chinensis HOM05D006614 ORTHO05D008217 3.4e-195 685.6 594 65.7
TPR.G25839 Trifolium pratense HOM05D006614 ORTHO05D008217 7.6e-195 684.5 572 62.2
Ca_05900_v3 Cicer arietinum L. HOM05D006614 ORTHO05D008217 1.3e-194 683.7 575 62.1
Psat2g179000 Pisum sativum HOM05D006614 ORTHO05D008217 2.2e-194 682.9 571 61.5
Medtr5g080700 Medicago truncatula HOM05D006614 ORTHO05D008217 2.9e-194 682.6 563 61.1
Thecc.07G116400 Theobroma cacao HOM05D006614 ORTHO05D008217 9.2e-193 677.6 541 65.6
arahy.Tifrunner.gnm1.ann1.087IU6 Arachis hypogaea HOM05D006614 ORTHO05D008217 4.6e-192 675.2 564 66.1
Lalb_Chr17g0346371 Lupinus albus HOM05D006614 ORTHO05D008217 6.0e-192 674.9 572 62.2
ClCG11G017450 Citrullus lanatus HOM05D006614 ORTHO05D008217 7.8e-192 674.5 642 61.1
THA.LOC104822565 Tarenaya hassleriana HOM05D006614 ORTHO05D008217 7.8e-192 674.5 645 58.8
arahy.Tifrunner.gnm1.ann1.UH0U35 Arachis hypogaea HOM05D006614 ORTHO05D008217 1.0e-191 674.1 564 66.3
Phvul.008G231100 Phaseolus vulgaris HOM05D006614 ORTHO05D008217 1.0e-191 674.1 575 61.9
Rhsim06G0208100 Rhododendron simsii HOM05D006614 ORTHO05D008217 1.7e-191 673.3 628 59.1
DCAR_021025 Daucus carota HOM05D006614 ORTHO05D008217 3.9e-191 672.2 638 59.4
Nitab4.5_0003565g0010 Nicotiana tabacum HOM05D006614 ORTHO05D008217 2.5e-190 669.5 656 55.5
Hma1.2p1_0290F.1_g114830 Hydrangea macrophylla HOM05D006614 ORTHO05D008217 5.6e-190 668.3 621 61.4
Lj1P829T27 Lonicera japonica HOM05D006614 ORTHO05D008217 2.8e-189 666.0 618 60.5
CANSAT35G1108 Cannabis sativa HOM05D006614 ORTHO05D008217 3.6e-189 665.6 632 61.4
Atru.chr2.2145 Acer truncatum HOM05D006614 ORTHO05D008217 5.2e-188 661.8 618 57.0
MELO3C025640.2 Cucumis melo HOM05D006614 ORTHO05D008217 6.8e-188 661.4 607 59.0
CsaV3_4G033120 Cucumis sativus L. HOM05D006614 ORTHO05D008217 1.2e-187 660.6 634 57.1
vmacro23466 Vaccinium macrocarpon HOM05D006614 ORTHO05D008217 1.5e-187 660.2 632 55.9
Ah.09g230960 Amaranthus hybridus HOM05D006614 ORTHO05D008217 5.8e-187 658.3 633 59.9
VMungo0647G0674 Vigna mungo HOM05D006614 ORTHO05D008217 5.8e-187 658.3 621 59.9
PSO421G0295 Papaver somniferum HOM05D006614 ORTHO05D008217 9.9e-187 657.5 622 57.6
Sp3g13110 Schrenkiella parvula HOM05D006614 ORTHO05D008217 9.9e-187 657.5 637 56.4
CAN.G375.15 Capsicum annuum HOM05D006614 ORTHO05D008217 1.3e-186 657.1 619 57.4
Sed0001562 Sechium edule HOM05D006614 ORTHO05D008217 2.2e-186 656.4 610 59.7
Thhalv10022322m.g Eutrema salsugineum HOM05D006614 ORTHO05D008217 3.2e-185 652.5 633 57.8
PSO063G1163 Papaver somniferum HOM05D006614 ORTHO05D008217 4.2e-185 652.1 627 57.6
Aqoxy1G00012 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 2.7e-184 649.4 581 64.5
Solyc07g062440.1 Solanum lycopersicum HOM05D006614 ORTHO05D008217 2.7e-184 649.4 637 57.9
PGSC0003DMG400046940 Solanum tuberosum HOM05D006614 ORTHO05D008217 3.5e-184 649.0 640 56.7
Sopen07g030680 Solanum pennellii HOM05D006614 ORTHO05D008217 7.8e-184 647.9 637 57.8
HanXRQChr15g0476201 Helianthus annuus HOM05D006614 ORTHO05D008217 1.3e-183 647.1 624 56.4
BolC5t33914H Brassica oleracea HOM05D006614 ORTHO05D008217 8.7e-183 644.4 631 58.0
MSTRG.6677 Avicennia marina HOM05D006614 ORTHO05D008217 1.1e-182 644.0 632 55.7
C05p52250 Brassica napus HOM05D006614 ORTHO05D008217 2.5e-182 642.9 631 56.3
Cc05_g11080 Coffea canephora HOM05D006614 ORTHO05D008217 2.5e-182 642.9 636 57.4
A05p34510 Brassica napus HOM05D006614 ORTHO05D008217 5.6e-182 641.7 631 55.8
BraA05t22271Z Brassica rapa HOM05D006614 ORTHO05D008217 5.6e-182 641.7 631 55.8
Carub.0003s1456 Capsella rubella HOM05D006614 ORTHO05D008217 9.6e-182 641.0 635 56.5
BcaB06g25331 Brassica carinata HOM05D006614 ORTHO05D008217 1.3e-181 640.6 640 56.6
AT3G14900 Arabidopsis thaliana HOM05D006614 ORTHO05D008217 2.8e-181 639.4 636 57.2
Potri.001G390600 Populus trichocarpa HOM05D006614 ORTHO05D008217 1.1e-180 637.5 617 57.5
AL3G27220 Arabidopsis lyrata HOM05D006614 ORTHO05D008217 2.4e-180 636.3 642 56.2
BcaB06g29517 Brassica carinata HOM05D006614 ORTHO05D008217 2.4e-180 636.3 614 56.4
unitig_747.g21586 Utricularia gibba HOM05D006614 ORTHO05D008217 2.6e-179 632.9 565 58.1
CDE12G0873 Ceratophyllum demersum HOM05D006614 ORTHO05D008217 2.4e-177 626.3 566 60.8
EL10Ac8g18445 Beta vulgaris HOM05D006614 ORTHO05D008217 4.2e-177 625.5 623 57.9
Oeu061358.1 Olea europaea HOM05D006614 ORTHO05D008217 7.1e-177 624.8 588 59.9
SalBow5G0223 Salvia bowleyana HOM05D006614 ORTHO05D008217 9.3e-177 624.4 610 54.6
Aa31LG8G2110 Aethionema arabicum HOM05D006614 ORTHO05D008217 2.1e-176 623.2 647 53.5
SGA_v2.0_scaffold34G13782 Striga asiatica HOM05D006614 ORTHO05D008217 3.0e-175 619.4 627 56.0
MBI12_g10753_MAGBIO Magnolia biondii HOM05D006614 ORTHO05D008217 9.6e-174 614.4 501 62.9
CARHR089840 Cardamine hirsuta HOM05D006614 ORTHO05D008217 2.4e-172 609.8 644 55.6
ECA240G1555 Erigeron canadensis HOM05D006614 ORTHO05D008217 4.0e-172 609.0 639 53.7
AUR62021467 Chenopodium quinoa HOM05D006614 ORTHO05D008217 6.7e-167 591.7 606 52.0
HPP92_015867 Vanilla planifolia HOM05D006614 ORTHO05D008217 1.1e-164 584.3 636 50.8
ATR0810G004 Amborella trichopoda HOM05D006614 ORTHO05D008217 2.5e-161 573.2 607 57.7
FAN25G0567 Fragaria x ananassa HOM05D006614 ORTHO05D008217 4.2e-161 572.4 634 53.5
Hma1.2p1_0290F.1_g114840 Hydrangea macrophylla HOM05D006614 ORTHO05D008217 1.7e-154 550.4 507 61.5
AUR62010952 Chenopodium quinoa HOM05D006614 ORTHO05D008217 8.4e-154 548.1 630 48.3
vmacro11940 Vaccinium macrocarpon HOM05D006614 ORTHO05D008217 2.8e-149 533.1 609 47.9
Zm00001eb078480 Zea mays HOM05D006614 ORTHO05D008217 5.3e-148 528.9 563 50.6
Psat0s3066g0080 Pisum sativum HOM05D006614 ORTHO05D008217 1.4e-143 514.2 367 66.2
Eucgr.K01881 Eucalyptus grandis HOM05D006614 ORTHO05D008217 8.2e-141 505.0 631 48.0
Sabra16G0256000 Salix brachista HOM05D006614 ORTHO05D008217 8.2e-141 505.0 334 68.6
Os04g0497900 Oryza sativa ssp. japonica HOM05D006614 ORTHO05D008217 1.3e-138 497.7 571 50.4
Aqoxy3G00116 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 3.8e-130 469.5 441 60.8
Ciclev10023881m.g Citrus clementina HOM05D006614 ORTHO05D008217 6.8e-103 379.0 362 59.7
Glyma.02G250300 Glycine max HOM05D006614 ORTHO05D008217 7.0e-100 369.0 359 59.1
SEGI_22211 Sequoiadendron giganteum HOM05D006614 ORTHO05D008217 4.0e-79 300.1 563 34.6
Pp3c16_3160 Physcomitrium patens HOM05D006614 ORTHO05D008217 1.3e-48 198.7 394 34.5
SMO356G0760 Selaginella moellendorffii HOM05D006614 ORTHO05D008217 5.3e-47 193.4 251 41.0
AagrBONN_evm.TU.Sc2ySwM_228.5094 Anthoceros agrestis HOM05D006614 ORTHO05D008217 3.4e-46 190.7 485 32.0
Cfa009322 Carpinus fangiana HOM05D006614 ORTHO05D008217 9.3e-44 182.6 121 73.6
SMO356G0609 Selaginella moellendorffii HOM05D006614 ORTHO05D008217 2.7e-43 181.0 500 34.8
Mapoly0097s0086 Marchantia polymorpha HOM05D006614 ORTHO05D008217 8.2e-40 169.5 240 34.2
Cfa001947 Carpinus fangiana HOM05D006614 ORTHO05D008217 4.6e-35 153.7 125 66.4
MD11G1263800 Malus domestica HOM05D006614 ORTHO05D008217 4.3e-33 147.1 90 72.2
Dinv02793 Davidia involucrata HOM05D006614 ORTHO05D008217 4.5e-30 137.1 80 77.5
Psat0s3066g0040 Pisum sativum HOM05D006614 ORTHO05D008217 1.4e-23 115.5 73 69.9
FAN21G3229 Fragaria x ananassa HOM05D006614 ORTHO05D008217 9.1e-23 112.8 71 70.4
CBR_g47994 Chara braunii HOM05D006614 ORTHO05D008217 2.5e-20 104.8 233 30.0
HPP92_015860 Vanilla planifolia HOM05D006614 ORTHO05D008217 7.2e-20 103.2 58 79.3
Aqoxy3G00115 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 3.6e-19 100.9 115 56.5


User provided reference genes

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