Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G159600 Carya illinoinensis HOM05D005139 ORTHO05D006125 5.3e-309 1063.5 546 100.0
Cfa019555 Carpinus fangiana HOM05D005139 ORTHO05D006125 1.6e-276 955.7 545 85.5
MD11G1264600 Malus domestica HOM05D005139 ORTHO05D006125 2.7e-276 954.9 544 89.5
GSVIVG01014182001 Vitis vinifera HOM05D005139 ORTHO05D006125 3.5e-276 954.5 546 89.2
Atru.chr2.2128 Acer truncatum HOM05D005139 ORTHO05D006125 1.3e-275 952.6 546 84.4
Ciclev10019589m.g Citrus clementina HOM05D005139 ORTHO05D006125 2.1e-273 945.3 546 88.6
Eucgr.F01248 Eucalyptus grandis HOM05D005139 ORTHO05D006125 4.0e-272 941.0 546 83.7
Thecc.07G118200 Theobroma cacao HOM05D005139 ORTHO05D006125 6.8e-272 940.3 544 87.1
Actinidia12584 Actinidia chinensis HOM05D005139 ORTHO05D006125 1.2e-271 939.5 545 85.3
Potri.011G108800 Populus trichocarpa HOM05D005139 ORTHO05D006125 2.0e-271 938.7 546 88.1
Manes.15G095700 Manihot esculenta HOM05D005139 ORTHO05D006125 3.4e-271 937.9 546 84.1
TWI38G1771 Tripterygium wilfordii HOM05D005139 ORTHO05D006125 1.3e-270 936.0 543 83.1
CSS0042561 Camellia sinensis var. sinensis HOM05D005139 ORTHO05D006125 3.7e-270 934.5 543 85.6
Duzib213G0634 Durio zibethinus HOM05D005139 ORTHO05D006125 6.4e-270 933.7 546 87.0
Potri.001G389300 Populus trichocarpa HOM05D005139 ORTHO05D006125 4.1e-269 931.0 546 83.0
Sed0024992 Sechium edule HOM05D005139 ORTHO05D006125 1.6e-268 929.1 545 86.2
MELO3C008916.2 Cucumis melo HOM05D005139 ORTHO05D006125 2.7e-268 928.3 543 82.7
CsaV3_4G030530 Cucumis sativus L. HOM05D005139 ORTHO05D006125 4.6e-268 927.5 543 82.7
Gohir.D01G042704 Gossypium hirsutum HOM05D005139 ORTHO05D006125 2.3e-267 925.2 546 85.9
Gorai.002G053800 Gossypium raimondii HOM05D005139 ORTHO05D006125 2.3e-267 925.2 546 85.9
Glyma.06G228700 Glycine max HOM05D005139 ORTHO05D006125 8.6e-267 923.3 546 86.8
Lj3g0013017 Lotus japonicus HOM05D005139 ORTHO05D006125 1.5e-266 922.5 545 87.0
Gohir.A01G053400 Gossypium hirsutum HOM05D005139 ORTHO05D006125 2.8e-265 918.3 546 85.0
Sopen12g006100 Solanum pennellii HOM05D005139 ORTHO05D006125 4.7e-265 917.5 545 84.8
COL.COLO4_17530 Corchorus olitorius HOM05D005139 ORTHO05D006125 1.1e-264 916.4 546 85.9
Solyc12g014320.2 Solanum lycopersicum HOM05D005139 ORTHO05D006125 1.8e-264 915.6 545 84.6
ClCG04G002160 Citrullus lanatus HOM05D005139 ORTHO05D006125 3.1e-264 914.8 542 86.2
Ciclev10023690m.g Citrus clementina HOM05D005139 ORTHO05D006125 4.0e-264 914.4 546 82.6
Phvul.011G165500 Phaseolus vulgaris HOM05D005139 ORTHO05D006125 4.0e-264 914.4 538 87.5
Dinv18369 Davidia involucrata HOM05D005139 ORTHO05D006125 3.4e-263 911.4 534 83.9
CANSAT35G0508 Cannabis sativa HOM05D005139 ORTHO05D006125 3.7e-262 907.9 539 85.9
Lalb_Chr03g0031181 Lupinus albus HOM05D005139 ORTHO05D006125 5.4e-261 904.0 546 85.3
CAN.G443.5 Capsicum annuum HOM05D005139 ORTHO05D006125 1.6e-260 902.5 545 81.1
Peaxi162Scf00000g06812 Petunia axillaris HOM05D005139 ORTHO05D006125 2.1e-260 902.1 545 85.3
Psat4g140160 Pisum sativum HOM05D005139 ORTHO05D006125 1.0e-259 899.8 546 80.6
RcHm_v2.0_Chr5g0030761 Rosa chinensis HOM05D005139 ORTHO05D006125 1.0e-259 899.8 546 79.5
Sabra11G0096100 Salix brachista HOM05D005139 ORTHO05D006125 1.0e-259 899.8 584 78.1
THA.LOC104812316 Tarenaya hassleriana HOM05D005139 ORTHO05D006125 1.3e-259 899.4 543 84.9
Lj8A148G34 Lonicera japonica HOM05D005139 ORTHO05D006125 3.0e-259 898.3 565 81.4
Glyma.12G156300 Glycine max HOM05D005139 ORTHO05D006125 3.9e-259 897.9 539 86.1
FvH4_3g18210 Fragaria vesca HOM05D005139 ORTHO05D006125 2.5e-258 895.2 541 83.2
HanXRQChr11g0331031 Helianthus annuus HOM05D005139 ORTHO05D006125 3.3e-258 894.8 534 85.4
Lsat_1_v5_gn_7_102480 Lactuca sativa HOM05D005139 ORTHO05D006125 7.3e-258 893.6 539 85.2
HanXRQChr15g0495211 Helianthus annuus HOM05D005139 ORTHO05D006125 1.2e-257 892.9 538 84.8
Thhalv10018370m.g Eutrema salsugineum HOM05D005139 ORTHO05D006125 1.6e-257 892.5 543 81.6
PSO063G5899 Papaver somniferum HOM05D005139 ORTHO05D006125 6.2e-257 890.6 533 84.8
Cc05_g10990 Coffea canephora HOM05D005139 ORTHO05D006125 1.1e-256 889.8 544 80.7
FAN21G0160 Fragaria x ananassa HOM05D005139 ORTHO05D006125 4.0e-256 887.9 540 82.6
PSO782G2705 Papaver somniferum HOM05D005139 ORTHO05D006125 4.0e-256 887.9 533 84.6
FAN25G1917 Fragaria x ananassa HOM05D005139 ORTHO05D006125 5.2e-256 887.5 541 82.4
Sp5g33790 Schrenkiella parvula HOM05D005139 ORTHO05D006125 1.2e-255 886.3 543 81.4
FAN16G0871 Fragaria x ananassa HOM05D005139 ORTHO05D006125 2.6e-255 885.2 541 82.8
Aa31LG4G2260 Aethionema arabicum HOM05D005139 ORTHO05D006125 3.4e-255 884.8 543 81.8
A07p43980 Brassica napus HOM05D005139 ORTHO05D006125 4.4e-255 884.4 543 78.8
BraA07t31905Z Brassica rapa HOM05D005139 ORTHO05D006125 4.4e-255 884.4 543 78.8
Aqoxy4G00276 Aquilegia oxysepala HOM05D005139 ORTHO05D006125 9.9e-255 883.2 541 80.4
CARHR072310 Cardamine hirsuta HOM05D005139 ORTHO05D006125 1.7e-254 882.5 543 81.2
BcaB03g16034 Brassica carinata HOM05D005139 ORTHO05D006125 2.2e-254 882.1 543 80.1
FAN11G0516 Fragaria x ananassa HOM05D005139 ORTHO05D006125 2.2e-254 882.1 541 82.6
Aqoxy3G02037 Aquilegia oxysepala HOM05D005139 ORTHO05D006125 3.7e-254 881.3 536 78.7
AL2G39160 Arabidopsis lyrata HOM05D005139 ORTHO05D006125 6.4e-254 880.6 543 79.6
BcaC08g47457 Brassica carinata HOM05D005139 ORTHO05D006125 1.9e-253 879.0 543 78.5
C06p52650 Brassica napus HOM05D005139 ORTHO05D006125 1.9e-253 879.0 543 78.5
Carub.0002s2560 Capsella rubella HOM05D005139 ORTHO05D006125 1.0e-251 873.2 543 80.5
PGR083G0616 Punica granatum HOM05D005139 ORTHO05D006125 1.3e-251 872.8 559 78.9
AT1G78770 Arabidopsis thaliana HOM05D005139 ORTHO05D006125 5.1e-251 870.9 543 80.5
ECA236G1068 Erigeron canadensis HOM05D005139 ORTHO05D006125 1.5e-250 869.4 577 76.4
arahy.Tifrunner.gnm1.ann1.J0RB3X Arachis hypogaea HOM05D005139 ORTHO05D006125 4.3e-250 867.8 543 83.6
SalBow7G0115 Salvia bowleyana HOM05D005139 ORTHO05D006125 9.6e-250 866.7 603 72.6
SalBow7G2844 Salvia bowleyana HOM05D005139 ORTHO05D006125 1.2e-249 866.3 603 72.5
QL08p026113 Quercus lobata HOM05D005139 ORTHO05D006125 6.2e-249 864.0 636 70.9
Migut.H02003 Erythranthe guttata HOM05D005139 ORTHO05D006125 2.6e-247 858.6 543 80.1
Sc03g0010570 Simmondsia chinensis HOM05D005139 ORTHO05D006125 3.4e-247 858.2 540 80.6
MBI06_g15765_MAGBIO Magnolia biondii HOM05D005139 ORTHO05D006125 3.0e-243 845.1 537 81.8
Medtr8g058380 Medicago truncatula HOM05D005139 ORTHO05D006125 3.0e-243 845.1 544 77.2
ATR0127G028 Amborella trichopoda HOM05D005139 ORTHO05D006125 6.6e-243 844.0 537 77.3
EL10Ac4g08361 Beta vulgaris HOM05D005139 ORTHO05D006125 4.3e-242 841.3 600 74.8
Haze_09316 Corylus avellana HOM05D005139 ORTHO05D006125 1.4e-240 836.3 534 78.5
arahy.Tifrunner.gnm1.ann1.405FF9 Arachis hypogaea HOM05D005139 ORTHO05D006125 1.8e-240 835.9 543 81.4
Prupe.4G161700 Prunus persica HOM05D005139 ORTHO05D006125 4.5e-239 831.2 549 80.9
Ah.04g164210 Amaranthus hybridus HOM05D005139 ORTHO05D006125 5.8e-239 830.9 540 76.7
Nitab4.5_0000035g0250 Nicotiana tabacum HOM05D005139 ORTHO05D006125 1.2e-231 806.6 545 75.4
Prupe.4G162300 Prunus persica HOM05D005139 ORTHO05D006125 1.2e-228 796.6 452 89.8
AUR62037557 Chenopodium quinoa HOM05D005139 ORTHO05D006125 5.6e-226 787.7 539 74.2
Zm00001eb399210 Zea mays HOM05D005139 ORTHO05D006125 1.3e-219 766.5 530 70.6
Os03g0236966 Oryza sativa ssp. japonica HOM05D005139 ORTHO05D006125 5.1e-219 764.6 530 72.6
Nitab4.5_0007851g0020 Nicotiana tabacum HOM05D005139 ORTHO05D006125 3.1e-216 755.4 556 70.7
unitig_26.g9517 Utricularia gibba HOM05D005139 ORTHO05D006125 2.2e-214 749.2 519 73.4
SGA_v2.0_scaffold130G34288 Striga asiatica HOM05D005139 ORTHO05D006125 3.8e-214 748.4 543 70.3
DCAR_013162 Daucus carota HOM05D005139 ORTHO05D006125 3.7e-201 705.3 540 71.7
Oeu005379.1 Olea europaea HOM05D005139 ORTHO05D006125 2.4e-200 702.6 761 52.7
vmacro11947 Vaccinium macrocarpon HOM05D005139 ORTHO05D006125 2.2e-198 696.0 540 68.7
SHI27616 Sapria himalayana HOM05D005139 ORTHO05D006125 1.4e-197 693.3 579 62.0
Hund10469 Selenicereus undatus HOM05D005139 ORTHO05D006125 1.1e-194 683.7 400 81.8
VMungo1127G1423 Vigna mungo HOM05D005139 ORTHO05D006125 1.1e-194 683.7 377 88.9
TAR626G0095 Trochodendron aralioides HOM05D005139 ORTHO05D006125 3.3e-194 682.2 376 87.8
AUR62019588 Chenopodium quinoa HOM05D005139 ORTHO05D006125 1.9e-189 666.4 534 65.7
C03p92750 Brassica napus HOM05D005139 ORTHO05D006125 3.5e-183 645.6 442 71.7
Pp3c16_8790 Physcomitrium patens HOM05D005139 ORTHO05D006125 1.8e-176 623.2 537 56.4
Mapoly0145s0019 Marchantia polymorpha HOM05D005139 ORTHO05D006125 7.0e-176 621.3 536 57.1
Ca_19229_v3 Cicer arietinum L. HOM05D005139 ORTHO05D006125 7.7e-175 617.8 372 80.1
SMO244G0086 Selaginella moellendorffii HOM05D005139 ORTHO05D006125 4.1e-160 568.9 533 53.1
Dinv15003 Davidia involucrata HOM05D005139 ORTHO05D006125 2.6e-154 549.7 389 73.0
CDE06G2579 Ceratophyllum demersum HOM05D005139 ORTHO05D006125 4.6e-143 512.3 490 55.3
SEGI_23856 Sequoiadendron giganteum HOM05D005139 ORTHO05D006125 3.0e-142 509.6 338 69.5
AagrBONN_evm.TU.Sc2ySwM_368.2003 Anthoceros agrestis HOM05D005139 ORTHO05D006125 5.1e-142 508.8 499 51.1
Zm00001eb010020 Zea mays HOM05D005139 ORTHO05D006125 1.9e-141 506.9 367 66.8
TPR.G5772 Trifolium pratense HOM05D005139 ORTHO05D006125 2.1e-124 450.3 269 82.5
TPR.G5739 Trifolium pratense HOM05D005139 ORTHO05D006125 5.3e-123 445.7 276 78.3
Cpa.g.sc77.24 Carica papaya HOM05D005139 ORTHO05D006125 4.3e-117 426.0 387 62.5
RcHm_v2.0_Chr1g0337671 Rosa chinensis HOM05D005139 ORTHO05D006125 1.9e-109 400.6 225 84.0
MCO01G684 Micromonas commoda HOM05D005139 ORTHO05D006125 7.4e-109 398.7 625 37.9
RcHm_v2.0_Chr3g0469831 Rosa chinensis HOM05D005139 ORTHO05D006125 1.1e-104 384.8 272 71.7
MD00G1077100 Malus domestica HOM05D005139 ORTHO05D006125 1.4e-104 384.4 325 65.5
CBR_g50377 Chara braunii HOM05D005139 ORTHO05D006125 2.6e-82 310.5 403 42.4
Potri.001G389500 Populus trichocarpa HOM05D005139 ORTHO05D006125 2.2e-73 280.8 158 84.2
Ciclev10023408m.g Citrus clementina HOM05D005139 ORTHO05D006125 9.4e-72 275.4 240 60.4
Ca_28352_v3 Cicer arietinum L. HOM05D005139 ORTHO05D006125 3.3e-69 266.9 154 86.4
Cfa023795 Carpinus fangiana HOM05D005139 ORTHO05D006125 1.6e-66 258.1 555 31.0
MD03G1275700 Malus domestica HOM05D005139 ORTHO05D006125 4.5e-66 256.5 192 70.8
HPP92_004205 Vanilla planifolia HOM05D005139 ORTHO05D006125 2.2e-65 254.2 157 77.1
BolC6t40284H Brassica oleracea HOM05D005139 ORTHO05D006125 3.6e-63 246.9 139 87.1
HPP92_004206 Vanilla planifolia HOM05D005139 ORTHO05D006125 3.6e-63 246.9 152 77.6
PRCOL_00005307 Prasinoderma coloniale HOM05D005139 ORTHO05D006125 2.4e-59 234.2 601 28.0
VMungo1127G2083 Vigna mungo HOM05D005139 ORTHO05D006125 5.0e-57 226.5 170 67.6
Ciclev10023923m.g Citrus clementina HOM05D005139 ORTHO05D006125 9.5e-56 222.2 152 75.7
Cre13.g562950 Chlamydomonas reinhardtii HOM05D005139 ORTHO05D006125 2.8e-55 220.7 819 23.6
Ciclev10023736m.g Citrus clementina HOM05D005139 ORTHO05D006125 1.4e-54 218.4 152 74.3
Ciclev10024516m.g Citrus clementina HOM05D005139 ORTHO05D006125 3.1e-51 207.2 244 49.2
Cpa.g.sc77.22 Carica papaya HOM05D005139 ORTHO05D006125 2.9e-49 200.7 144 68.8
CBR_g50375 Chara braunii HOM05D005139 ORTHO05D006125 7.3e-48 196.1 163 57.1
Aqoxy256s002 Aquilegia oxysepala HOM05D005139 ORTHO05D006125 3.6e-47 193.7 109 85.3
Haze_27412 Corylus avellana HOM05D005139 ORTHO05D006125 8.0e-47 192.6 229 43.2
Sabra16G0255500 Salix brachista HOM05D005139 ORTHO05D006125 4.6e-42 176.8 193 51.3
Hund10473 Selenicereus undatus HOM05D005139 ORTHO05D006125 7.3e-40 169.5 137 59.9
vmacro11946 Vaccinium macrocarpon HOM05D005139 ORTHO05D006125 5.4e-35 153.3 121 68.6
MD03G1275800 Malus domestica HOM05D005139 ORTHO05D006125 9.2e-35 152.5 85 89.4
ClCG05G009350 Citrullus lanatus HOM05D005139 ORTHO05D006125 1.0e-09 69.3 53 64.2
Ciclev10024667m.g Citrus clementina HOM05D005139 ORTHO05D152313 8.1e-07 59.7 51 62.7
ClCG07G010240 Citrullus lanatus HOM05D005139 ORTHO05D006125 2.4e-06 58.2 70 55.7
SGA_v2.0_scaffold16G07518 Striga asiatica HOM05D005139 ORTHO05D006125 3.1e-06 57.8 116 34.5
Rhsim12G0175500 Rhododendron simsii HOM05D005139 ORTHO05D006125 5.3e-06 57.0 110 34.5


User provided reference genes

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