Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G153200 Carya illinoinensis HOM05D006466 ORTHO05D008084 2.4e-106 389.0 224 100.0
Haze_07889 Corylus avellana HOM05D006466 ORTHO05D008084 2.0e-76 289.7 232 72.0
Cfa012739 Carpinus fangiana HOM05D006466 ORTHO05D008084 3.7e-75 285.4 232 70.7
Potri.001G123200 Populus trichocarpa HOM05D006466 ORTHO05D008084 7.3e-71 271.2 231 64.5
Sabra01G0094900 Salix brachista HOM05D006466 ORTHO05D008084 4.7e-70 268.5 231 63.6
Eucgr.D02068 Eucalyptus grandis HOM05D006466 ORTHO05D008084 3.1e-69 265.8 229 63.8
QL12p012545 Quercus lobata HOM05D006466 ORTHO05D008084 1.7e-67 260.0 238 63.4
Thecc.03G253200 Theobroma cacao HOM05D006466 ORTHO05D008084 1.1e-66 257.3 232 67.7
Dinv39131 Davidia involucrata HOM05D006466 ORTHO05D008084 1.9e-66 256.5 233 65.7
RcHm_v2.0_Chr7g0203001 Rosa chinensis HOM05D006466 ORTHO05D008084 2.4e-66 256.1 243 63.4
Ciclev10005762m.g Citrus clementina HOM05D006466 ORTHO05D008084 2.7e-65 252.7 238 61.8
Gohir.A12G217700 Gossypium hirsutum HOM05D006466 ORTHO05D008084 7.8e-65 251.1 234 65.0
MELO3C005537.2 Cucumis melo HOM05D006466 ORTHO05D008084 2.5e-63 246.1 222 61.7
ClCG01G004000 Citrullus lanatus HOM05D006466 ORTHO05D008084 4.3e-63 245.4 222 62.2
TWI81G0148 Tripterygium wilfordii HOM05D006466 ORTHO05D008084 4.3e-63 245.4 239 60.3
FvH4_5g18710 Fragaria vesca HOM05D006466 ORTHO05D008084 5.6e-63 245.0 237 64.6
CsaV3_5G004180 Cucumis sativus L. HOM05D006466 ORTHO05D008084 7.3e-63 244.6 222 60.4
Gorai.008G235900 Gossypium raimondii HOM05D006466 ORTHO05D008084 7.3e-63 244.6 234 64.1
FAN04G2180 Fragaria x ananassa HOM05D006466 ORTHO05D008084 9.5e-63 244.2 237 62.0
FAN18G0606 Fragaria x ananassa HOM05D006466 ORTHO05D008084 9.5e-63 244.2 237 64.1
Atru.chr2.1841 Acer truncatum HOM05D006466 ORTHO05D008084 1.6e-62 243.4 229 64.2
Actinidia27463 Actinidia chinensis HOM05D006466 ORTHO05D008084 1.6e-62 243.4 228 61.4
Gohir.D12G220200 Gossypium hirsutum HOM05D006466 ORTHO05D008084 1.6e-62 243.4 234 63.7
GSVIVG01001313001 Vitis vinifera HOM05D006466 ORTHO05D008084 6.2e-62 241.5 222 63.1
Sed0026776 Sechium edule HOM05D006466 ORTHO05D008084 2.3e-61 239.6 222 63.5
Sed0012351 Sechium edule HOM05D006466 ORTHO05D008084 1.3e-59 233.8 230 63.0
TAR375G0032 Trochodendron aralioides HOM05D006466 ORTHO05D008084 4.9e-59 231.9 222 64.0
PGR031G1557 Punica granatum HOM05D006466 ORTHO05D008084 6.4e-59 231.5 229 62.0
FAN13G1623 Fragaria x ananassa HOM05D006466 ORTHO05D008084 2.4e-58 229.6 233 59.7
Prupe.5G071300 Prunus persica HOM05D006466 ORTHO05D008084 4.6e-57 225.3 223 67.3
Hma1.2p1_2380F.1_g320960 Hydrangea macrophylla HOM05D006466 ORTHO05D008084 1.3e-56 223.8 240 56.7
Cpa.g.sc29.144 Carica papaya HOM05D006466 ORTHO05D008084 1.7e-56 223.4 228 61.4
MD04G1088600 Malus domestica HOM05D006466 ORTHO05D008084 1.1e-55 220.7 245 58.0
Nn1g01036 Nelumbo nucifera HOM05D006466 ORTHO05D008084 1.1e-55 220.7 216 66.7
FAN08G0853 Fragaria x ananassa HOM05D006466 ORTHO05D008084 1.5e-55 220.3 236 60.6
Eucgr.D02058 Eucalyptus grandis HOM05D006466 ORTHO05D008084 3.3e-55 219.2 222 59.5
Sopen08g027210 Solanum pennellii HOM05D006466 ORTHO05D008084 2.4e-53 213.0 241 53.1
PGSC0003DMG401004755 Solanum tuberosum HOM05D006466 ORTHO05D008084 2.4e-53 213.0 241 53.1
Solyc08g078740.1 Solanum lycopersicum HOM05D006466 ORTHO05D008084 3.1e-53 212.6 241 53.1
Carub.0007s2494 Capsella rubella HOM05D006466 ORTHO05D008084 5.2e-53 211.8 257 52.9
Manes.01G079600 Manihot esculenta HOM05D006466 ORTHO05D008084 2.6e-52 209.5 233 57.1
Aa31LG2G12660 Aethionema arabicum HOM05D006466 ORTHO05D008084 2.2e-51 206.5 247 54.3
CANSAT21G1921 Cannabis sativa HOM05D006466 ORTHO05D008084 2.2e-51 206.5 242 56.6
Lj1A353T9 Lonicera japonica HOM05D006466 ORTHO05D008084 2.2e-51 206.5 229 54.6
Manes.15G178400 Manihot esculenta HOM05D006466 ORTHO05D008084 3.8e-51 205.7 217 56.2
DCAR_008489 Daucus carota HOM05D005079 ORTHO05D006362 6.4e-51 204.9 236 53.4
Manes.15G178500 Manihot esculenta HOM05D006466 ORTHO05D008084 1.1e-50 204.1 217 56.2
MSTRG.12091 Avicennia marina HOM05D006466 ORTHO05D008084 9.3e-50 201.1 237 55.3
CARHR222950 Cardamine hirsuta HOM05D006466 ORTHO05D008084 9.3e-50 201.1 259 53.3
Lsat_1_v5_gn_3_521 Lactuca sativa HOM05D006466 ORTHO05D008084 9.3e-50 201.1 229 54.1
BcaNung02868 Brassica carinata HOM05D006466 ORTHO05D008084 1.2e-49 200.7 258 52.3
Sp7g15110 Schrenkiella parvula HOM05D006466 ORTHO05D008084 1.2e-49 200.7 261 50.6
Ah.12g056750 Amaranthus hybridus HOM05D006466 ORTHO05D008084 4.6e-49 198.7 234 51.7
TPR.G37616 Trifolium pratense HOM05D006466 ORTHO05D008084 7.8e-49 198.0 241 53.5
Thhalv10026056m.g Eutrema salsugineum HOM05D006466 ORTHO05D008084 3.0e-48 196.1 260 50.8
Nitab4.5_0008481g0010 Nicotiana tabacum HOM05D006466 ORTHO05D008084 5.1e-48 195.3 239 51.5
AL7G38350 Arabidopsis lyrata HOM05D006466 ORTHO05D008084 6.6e-48 194.9 255 51.0
AL7G38400 Arabidopsis lyrata HOM05D006466 ORTHO05D008084 6.6e-48 194.9 255 51.0
Nitab4.5_0000312g0170 Nicotiana tabacum HOM05D006466 ORTHO05D008084 8.7e-48 194.5 244 50.4
CDE02G4728 Ceratophyllum demersum HOM05D006466 ORTHO05D008084 1.9e-47 193.4 222 50.0
PSO170G1975 Papaver somniferum HOM05D006466 ORTHO05D008084 2.5e-47 193.0 227 53.7
PSO528G0015 Papaver somniferum HOM05D006466 ORTHO05D008084 3.3e-47 192.6 228 54.8
Medtr4g101030 Medicago truncatula HOM05D006466 ORTHO05D008084 4.3e-47 192.2 241 53.1
arahy.Tifrunner.gnm1.ann1.VT8LY8 Arachis hypogaea HOM05D006466 ORTHO05D008084 4.8e-46 188.7 233 50.6
Phvul.003G219800 Phaseolus vulgaris HOM05D006466 ORTHO05D008084 6.2e-46 188.3 229 56.8
A03p49940 Brassica napus HOM05D006466 ORTHO05D008084 1.4e-45 187.2 256 49.2
BraA03t14087Z Brassica rapa HOM05D006466 ORTHO05D008084 1.4e-45 187.2 256 49.2
SHI10480 Sapria himalayana HOM05D006466 ORTHO05D008084 1.8e-45 186.8 231 51.1
Peaxi162Scf00002g00172 Petunia axillaris HOM05D006466 ORTHO05D008084 3.1e-45 186.0 264 49.6
BcaC06g33488 Brassica carinata HOM05D006466 ORTHO05D008084 6.9e-45 184.9 260 49.2
C07p47980 Brassica napus HOM05D006466 ORTHO05D008084 6.9e-45 184.9 260 49.2
BolC7t45321H Brassica oleracea HOM05D006466 ORTHO05D008084 6.9e-45 184.9 260 49.2
unitig_61.g26196 Utricularia gibba HOM05D006466 ORTHO05D008084 2.0e-44 183.3 237 49.8
Lj4g0024258 Lotus japonicus HOM05D006466 ORTHO05D008084 3.4e-44 182.6 226 54.9
Nn6g33981 Nelumbo nucifera HOM05D006466 ORTHO05D008084 2.2e-43 179.9 175 64.0
HPP92_014482 Vanilla planifolia HOM05D006466 ORTHO05D008084 2.9e-43 179.5 242 49.2
arahy.Tifrunner.gnm1.ann1.HK6I2L Arachis hypogaea HOM05D006466 ORTHO05D008084 3.8e-43 179.1 233 46.4
GSVIVG01030884001 Vitis vinifera HOM05D006466 ORTHO05D008084 3.8e-43 179.1 212 51.4
AT4G16535 Arabidopsis thaliana HOM05D006466 ORTHO05D008084 8.4e-43 177.9 257 48.6
ATR0193G040 Amborella trichopoda HOM05D006466 ORTHO05D008084 1.1e-42 177.6 174 56.3
Migut.A00968 Erythranthe guttata HOM05D006466 ORTHO05D008084 1.4e-42 177.2 244 49.2
SGA_v2.0_scaffold120G32877 Striga asiatica HOM05D006466 ORTHO05D008084 3.2e-42 176.0 246 49.6
VMungo0251G3296 Vigna mungo HOM05D006466 ORTHO05D008084 9.3e-42 174.5 239 54.4
ECA232G3467 Erigeron canadensis HOM05D006466 ORTHO05D008084 1.6e-41 173.7 234 47.4
arahy.Tifrunner.gnm1.ann1.LISY29 Arachis hypogaea HOM05D006466 ORTHO05D008084 2.1e-41 173.3 240 46.7
SalBow6G4398 Salvia bowleyana HOM05D006466 ORTHO05D008084 2.1e-41 173.3 178 54.5
Rhsim07G0108000 Rhododendron simsii HOM05D006466 ORTHO05D008084 2.7e-41 172.9 162 59.3
Psat4g071640 Pisum sativum HOM05D006466 ORTHO05D008084 7.9e-41 171.4 191 52.9
Aqoxy6G01886 Aquilegia oxysepala HOM05D006466 ORTHO05D008084 3.9e-40 169.1 247 48.2
arahy.Tifrunner.gnm1.ann1.MY6G43 Arachis hypogaea HOM05D006466 ORTHO05D008084 6.6e-40 168.3 232 49.1
Lalb_Chr16g0389331 Lupinus albus HOM05D006466 ORTHO05D008084 9.6e-39 164.5 236 51.3
Ca_21959_v3 Cicer arietinum L. HOM05D006466 ORTHO05D008084 1.6e-38 163.7 162 56.2
Lj8A452G56 Lonicera japonica HOM05D006466 ORTHO05D008084 6.2e-38 161.8 231 45.9
Cc08_g12600 Coffea canephora HOM05D006466 ORTHO05D008084 1.3e-35 154.1 205 49.3
Oeu019590.1 Olea europaea HOM05D006466 ORTHO05D008084 3.8e-35 152.5 224 47.8
CDE11G0010 Ceratophyllum demersum HOM05D006466 ORTHO05D008084 1.2e-33 147.5 182 49.5
AUR62007505 Chenopodium quinoa HOM05D006466 ORTHO05D008084 4.6e-33 145.6 179 50.3
SEGI_30297 Sequoiadendron giganteum HOM05D006466 ORTHO05D008084 2.3e-32 143.3 231 47.6
Os10g0507500 Oryza sativa ssp. japonica HOM05D006466 ORTHO05D008084 3.9e-32 142.5 253 45.8
Glyma.17G140900 Glycine max HOM05D006466 ORTHO05D008084 2.5e-31 139.8 232 45.7
AUR62039958 Chenopodium quinoa HOM05D006466 ORTHO05D008084 2.2e-27 126.7 222 41.9
AagrBONN_evm.TU.Sc2ySwM_228.639 Anthoceros agrestis HOM05D007188 ORTHO05D009102 4.6e-25 119.0 219 37.4
arahy.Tifrunner.gnm1.ann1.Y2DLV0 Arachis hypogaea HOM05D006466 ORTHO05D008084 5.7e-23 112.1 109 56.0
arahy.Tifrunner.gnm1.ann1.AC5BZW Arachis hypogaea HOM05D006466 ORTHO05D008084 3.7e-22 109.4 172 44.2
Mapoly0015s0012 Marchantia polymorpha HOM05D006466 ORTHO05D008084 3.7e-22 109.4 267 34.5
Pp3c3_19850 Physcomitrium patens HOM05D006466 ORTHO05D008084 4.5e-20 102.4 218 37.2
HanXRQChr02g0051581 Helianthus annuus HOM05D006466 ORTHO05D008084 6.5e-19 98.6 108 54.6
Oeu039628.1 Olea europaea HOM05D006466 ORTHO05D008084 2.7e-17 93.2 54 87.0
Sc22g0000810 Simmondsia chinensis HOM05D006466 ORTHO05D008084 1.5e-15 87.4 114 57.0
Eucgr.L01522 Eucalyptus grandis HOM05D006466 ORTHO05D008084 1.9e-15 87.0 51 84.3
Zm00001eb044010 Zea mays HOM05D006466 ORTHO05D008084 2.5e-15 86.7 62 72.6
arahy.Tifrunner.gnm1.ann1.W2BU8F Arachis hypogaea HOM05D004339 ORTHO05D002389 6.3e-14 82.0 171 38.0
BcaC04g19403 Brassica carinata HOM05D006466 ORTHO05D008084 5.3e-13 79.0 149 42.3
BolC9t58475H Brassica oleracea HOM05D006466 ORTHO05D008084 5.3e-13 79.0 149 42.3
Actinidia05202 Actinidia chinensis HOM05D006466 ORTHO05D008084 1.7e-11 73.9 88 51.1
arahy.Tifrunner.gnm1.ann1.X9JZY0 Arachis hypogaea HOM05D004687 ORTHO05D006002 8.8e-08 61.6 58 53.4
BcaC01g01648 Brassica carinata HOM05D006466 ORTHO05D008084 8.8e-08 61.6 101 38.6
C03p73400 Brassica napus HOM05D006466 ORTHO05D008084 2.6e-07 60.1 103 37.9
CBR_g29445 Chara braunii HOM05D006466 ORTHO05D008084 2.6e-07 60.1 80 48.8
BraA04t17310Z Brassica rapa HOM05D006466 ORTHO05D008084 9.7e-07 58.2 97 42.3
Cre06.g300200 Chlamydomonas reinhardtii HOM05D006466 ORTHO05D008084 1.3e-06 57.8 33 81.8
C03p59450 Brassica napus HOM05D006466 ORTHO05D008084 2.2e-06 57.0 56 50.0
C09p56080 Brassica napus HOM05D006466 ORTHO05D008084 6.3e-06 55.5 97 43.3


User provided reference genes

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