Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G140500 Carya illinoinensis HOM05D006075 ORTHO05D007527 5.5e-278 960.3 477 100.0
QL12p017421 Quercus lobata HOM05D006075 ORTHO05D007527 2.4e-233 812.0 477 84.9
Dinv37681 Davidia involucrata HOM05D006075 ORTHO05D007527 1.3e-210 736.5 445 82.2
Prupe.5G091900 Prunus persica HOM05D006075 ORTHO05D007527 1.1e-209 733.4 481 77.5
Potri.001G109200 Populus trichocarpa HOM05D006075 ORTHO05D007527 2.5e-209 732.3 470 78.5
Lj4g0025720 Lotus japonicus HOM05D006075 ORTHO05D007527 3.5e-208 728.4 470 76.8
Glyma.17G131000 Glycine max HOM05D006075 ORTHO05D007527 6.1e-208 727.6 469 78.0
Ciclev10019953m.g Citrus clementina HOM05D006075 ORTHO05D007527 3.9e-207 724.9 480 76.5
GSVIVG01019817001 Vitis vinifera HOM05D006075 ORTHO05D007527 3.9e-207 724.9 451 79.6
Atru.chr9.1549 Acer truncatum HOM05D006075 ORTHO05D007527 8.7e-207 723.8 466 77.0
Manes.01G066100 Manihot esculenta HOM05D006075 ORTHO05D007527 1.5e-206 723.0 479 76.0
Thecc.02G127300 Theobroma cacao HOM05D006075 ORTHO05D007527 7.4e-206 720.7 478 76.8
MD06G1073700 Malus domestica HOM05D006075 ORTHO05D007527 1.6e-205 719.5 463 78.4
Gorai.002G011900 Gossypium raimondii HOM05D006075 ORTHO05D007527 3.7e-205 718.4 474 77.0
RcHm_v2.0_Chr7g0199111 Rosa chinensis HOM05D006075 ORTHO05D007527 6.3e-205 717.6 478 76.2
Gohir.A01G010200 Gossypium hirsutum HOM05D006075 ORTHO05D007527 1.4e-204 716.5 474 76.8
CANSAT21G0515 Cannabis sativa HOM05D006075 ORTHO05D007527 3.1e-204 715.3 463 77.3
TPR.G19222 Trifolium pratense HOM05D006075 ORTHO05D007527 6.9e-204 714.1 471 74.9
Gohir.D01G009800 Gossypium hirsutum HOM05D006075 ORTHO05D007527 1.2e-203 713.4 474 76.4
Medtr4g102820 Medicago truncatula HOM05D006075 ORTHO05D007527 2.6e-203 712.2 477 75.1
Phvul.003G211900 Phaseolus vulgaris HOM05D006075 ORTHO05D007527 4.5e-203 711.4 472 76.3
TWI81G0173 Tripterygium wilfordii HOM05D006075 ORTHO05D007527 4.5e-203 711.4 465 78.7
TPR.G23260 Trifolium pratense HOM05D006075 ORTHO05D007527 1.3e-202 709.9 459 75.8
Sabra01G0082500 Salix brachista HOM05D006075 ORTHO05D007527 1.7e-202 709.5 508 72.4
Eucgr.E00536 Eucalyptus grandis HOM05D006075 ORTHO05D007527 2.2e-202 709.1 463 76.9
FAN18G0544 Fragaria x ananassa HOM05D006075 ORTHO05D007527 5.0e-202 708.0 475 75.4
Nn6g34229 Nelumbo nucifera HOM05D006075 ORTHO05D007527 8.5e-202 707.2 456 76.8
FAN08G0877 Fragaria x ananassa HOM05D006075 ORTHO05D007527 1.4e-201 706.4 475 75.2
FAN04G1557 Fragaria x ananassa HOM05D006075 ORTHO05D007527 3.6e-200 701.8 475 74.7
CSS0042428 Camellia sinensis var. sinensis HOM05D006075 ORTHO05D007527 1.4e-199 699.9 453 77.7
Psat4g067760 Pisum sativum HOM05D006075 ORTHO05D007527 1.4e-199 699.9 479 73.9
Psat1g082240 Pisum sativum HOM05D006075 ORTHO05D007527 3.0e-199 698.7 474 73.4
Rhsim07G0094000 Rhododendron simsii HOM05D006075 ORTHO05D007527 2.0e-198 696.0 477 74.4
MD04G1066500 Malus domestica HOM05D006075 ORTHO05D007527 3.7e-197 691.8 445 78.7
Lalb_Chr16g0389751 Lupinus albus HOM05D006075 ORTHO05D007527 6.9e-196 687.6 456 75.0
MELO3C005634.2 Cucumis melo HOM05D006075 ORTHO05D007527 9.1e-196 687.2 465 73.3
Lalb_Chr09g0333281 Lupinus albus HOM05D006075 ORTHO05D007527 4.5e-195 684.9 458 74.0
PSO478G2556 Papaver somniferum HOM05D006075 ORTHO05D007527 1.0e-194 683.7 471 72.4
Lj2A193G48 Lonicera japonica HOM05D006075 ORTHO05D007527 1.7e-194 682.9 437 78.7
CsaV3_5G003210 Cucumis sativus L. HOM05D006075 ORTHO05D007527 3.8e-194 681.8 461 72.9
arahy.Tifrunner.gnm1.ann1.M2EVQD Arachis hypogaea HOM05D006075 ORTHO05D007527 1.1e-193 680.2 470 71.5
PSO782G2103 Papaver somniferum HOM05D006075 ORTHO05D007527 1.1e-193 680.2 471 72.0
Oeu011664.1 Olea europaea HOM05D006075 ORTHO05D007527 1.4e-193 679.9 466 74.2
Sed0007766 Sechium edule HOM05D006075 ORTHO05D007527 2.5e-193 679.1 468 73.1
Cc08_g14070 Coffea canephora HOM05D006075 ORTHO05D007527 2.3e-191 672.5 456 74.3
Sopen08g028750 Solanum pennellii HOM05D006075 ORTHO05D007527 2.0e-190 669.5 466 74.0
MSTRG.13821 Avicennia marina HOM05D006075 ORTHO05D007527 4.4e-190 668.3 466 73.0
Solyc08g080420.4 Solanum lycopersicum HOM05D006075 ORTHO05D007527 3.7e-189 665.2 466 73.4
CAN.G981.23 Capsicum annuum HOM05D006075 ORTHO05D007527 6.3e-189 664.5 451 74.7
Sp2g01480 Schrenkiella parvula HOM05D006075 ORTHO05D007527 7.7e-187 657.5 459 71.9
AL2G12410 Arabidopsis lyrata HOM05D006075 ORTHO05D007527 1.0e-186 657.1 468 70.9
AT1G63110 Arabidopsis thaliana HOM05D006075 ORTHO05D007527 1.3e-186 656.8 474 69.6
Migut.E01290 Erythranthe guttata HOM05D006075 ORTHO05D007527 1.3e-186 656.8 469 71.6
Thhalv10023435m.g Eutrema salsugineum HOM05D006075 ORTHO05D007527 6.5e-186 654.4 459 71.7
Carub.0002s0185 Capsella rubella HOM05D006075 ORTHO05D007527 8.5e-186 654.1 459 71.2
BcaC04g22472 Brassica carinata HOM05D006075 ORTHO05D007527 1.5e-185 653.3 459 71.0
A09p15680 Brassica napus HOM05D006075 ORTHO05D007527 2.5e-185 652.5 471 70.1
BraA09t37209Z Brassica rapa HOM05D006075 ORTHO05D007527 2.5e-185 652.5 471 70.1
C09p18910 Brassica napus HOM05D006075 ORTHO05D007527 9.4e-185 650.6 460 70.7
THA.LOC104818186 Tarenaya hassleriana HOM05D006075 ORTHO05D007527 1.6e-184 649.8 460 71.1
BcaB07g31383 Brassica carinata HOM05D006075 ORTHO05D007527 3.6e-184 648.7 459 70.6
VMungo1215G1399 Vigna mungo HOM05D006075 ORTHO05D007527 1.5e-182 643.3 424 77.4
arahy.Tifrunner.gnm1.ann1.S8HR28 Arachis hypogaea HOM05D006075 ORTHO05D007527 2.0e-182 642.9 470 68.7
ECA240G3011 Erigeron canadensis HOM05D006075 ORTHO05D007527 3.3e-182 642.1 464 70.7
Aa31LG2G590 Aethionema arabicum HOM05D006075 ORTHO05D007527 7.5e-182 641.0 494 66.6
PGR042G3166 Punica granatum HOM05D006075 ORTHO05D007527 7.0e-180 634.4 461 70.5
HanXRQChr03g0085661 Helianthus annuus HOM05D006075 ORTHO05D007527 2.7e-179 632.5 467 70.9
Actinidia05225 Actinidia chinensis HOM05D006075 ORTHO05D007527 2.2e-178 629.4 466 69.5
BolC9t54793H Brassica oleracea HOM05D006075 ORTHO05D007527 2.2e-178 629.4 463 69.1
FvH4_5g01570 Fragaria vesca HOM05D006075 ORTHO05D007527 2.7e-176 622.5 424 73.6
HPP92_001310 Vanilla planifolia HOM05D006075 ORTHO05D007527 2.0e-171 606.3 452 66.6
AT1G12730 Arabidopsis thaliana HOM05D006075 ORTHO05D007527 7.2e-169 597.8 472 64.2
Os02g0688900 Oryza sativa ssp. japonica HOM05D006075 ORTHO05D007527 9.4e-169 597.4 455 65.7
SalBow1G6580 Salvia bowleyana HOM05D006075 ORTHO05D007527 6.8e-167 591.3 578 56.2
EL10Ac5g12736 Beta vulgaris HOM05D006075 ORTHO05D007527 4.4e-166 588.6 449 67.3
Peaxi162Scf00714g00528 Petunia axillaris HOM05D006075 ORTHO05D007527 9.8e-166 587.4 533 60.6
Lsat_1_v5_gn_6_87521 Lactuca sativa HOM05D006075 ORTHO05D007527 1.6e-163 580.1 447 67.8
SGA_v2.0_scaffold385G50455 Striga asiatica HOM05D006075 ORTHO05D007527 3.5e-163 578.9 474 64.6
TAR629G3145 Trochodendron aralioides HOM05D006075 ORTHO05D007527 4.5e-163 578.6 371 76.0
Carub.0001s1243 Capsella rubella HOM05D006075 ORTHO05D007527 6.6e-162 574.7 465 63.0
FAN13G2280 Fragaria x ananassa HOM05D006075 ORTHO05D007527 1.5e-161 573.5 388 74.7
CDE11G0531 Ceratophyllum demersum HOM05D006075 ORTHO05D007527 1.0e-159 567.4 457 64.8
vmacro13924 Vaccinium macrocarpon HOM05D006075 ORTHO05D007527 6.8e-159 564.7 456 65.1
SEGI_27555 Sequoiadendron giganteum HOM05D006075 ORTHO05D007527 3.4e-158 562.4 465 59.4
FAN08G0114 Fragaria x ananassa HOM05D006075 ORTHO05D007527 1.7e-157 560.1 413 69.5
ClCG01G003090 Citrullus lanatus HOM05D006075 ORTHO05D007527 6.4e-157 558.1 471 63.5
COL.COLO4_32412 Corchorus olitorius HOM05D006075 ORTHO05D007527 8.0e-152 541.2 481 61.7
TAR629G0535 Trochodendron aralioides HOM05D006075 ORTHO05D007527 8.0e-152 541.2 343 78.1
AL1G24320 Arabidopsis lyrata HOM05D006075 ORTHO05D007527 1.4e-148 530.4 464 59.9
HanXRQChr11g0323321 Helianthus annuus HOM05D006075 ORTHO05D007527 5.4e-148 528.5 471 61.6
Manes.02G026900 Manihot esculenta HOM05D006075 ORTHO05D007527 6.0e-147 525.0 526 58.4
Duzib052G1148 Durio zibethinus HOM05D006075 ORTHO05D007527 1.7e-146 523.5 474 61.0
PSO478G1113 Papaver somniferum HOM05D006075 ORTHO05D007527 4.6e-139 498.8 326 76.1
Nitab4.5_0002853g0070 Nicotiana tabacum HOM05D006075 ORTHO05D007527 1.9e-137 493.4 502 56.0
unitig_744.g24646 Utricularia gibba HOM05D006075 ORTHO05D007527 1.2e-136 490.7 467 56.5
Haze_08940 Corylus avellana HOM05D006075 ORTHO05D007527 5.2e-135 485.3 282 86.9
Nitab4.5_0016932g0010 Nicotiana tabacum HOM05D006075 ORTHO05D007527 2.0e-134 483.4 466 57.9
Glyma.05G049100 Glycine max HOM05D006075 ORTHO05D007527 5.8e-134 481.9 327 74.9
Sc01g0008740 Simmondsia chinensis HOM05D006075 ORTHO05D007527 3.0e-130 469.5 359 66.3
CARHR013020 Cardamine hirsuta HOM05D006075 ORTHO05D007527 3.8e-125 452.6 371 61.2
PGSC0003DMG400003033 Solanum tuberosum HOM05D006075 ORTHO05D007527 1.1e-124 451.1 444 57.2
ATR0322G053 Amborella trichopoda HOM05D006075 ORTHO05D007527 7.8e-123 444.9 327 66.4
Mapoly0001s0316 Marchantia polymorpha HOM05D006075 ORTHO05D007527 2.1e-115 420.2 465 49.0
Pp3c9_23740 Physcomitrium patens HOM05D006075 ORTHO05D007527 1.0e-114 417.9 481 48.2
Ah.12g057560 Amaranthus hybridus HOM05D006075 ORTHO05D007527 1.1e-113 414.5 446 54.0
CARHR048400 Cardamine hirsuta HOM05D006075 ORTHO05D007527 3.8e-109 399.4 315 64.1
SMO270G0127 Selaginella moellendorffii HOM05D006075 ORTHO05D007527 5.1e-106 389.0 476 44.7
Hund14727 Selenicereus undatus HOM05D006075 ORTHO05D007527 8.1e-104 381.7 471 48.8
Sed0016840 Sechium edule HOM05D006075 ORTHO05D007527 3.1e-103 379.8 268 70.5
Zm00001eb251050 Zea mays HOM05D006075 ORTHO05D007527 1.6e-96 357.5 307 58.6
Cpa.g.sc74.79 Carica papaya HOM05D006075 ORTHO05D007527 5.9e-94 349.0 298 59.7
Dinv39003 Davidia involucrata HOM05D006075 ORTHO05D007527 2.7e-83 313.5 289 59.2
AagrBONN_evm.TU.Sc2ySwM_117.1004 Anthoceros agrestis HOM05D006075 ORTHO05D007527 2.6e-78 297.0 374 44.9
CBR_g17923 Chara braunii HOM05D006075 ORTHO05D007527 2.2e-72 277.3 759 29.0
Os01g0870201 Oryza sativa ssp. japonica HOM05D006075 ORTHO05D007527 1.8e-71 274.2 459 39.7
CSS0009197 Camellia sinensis var. sinensis HOM05D006075 ORTHO05D007527 5.9e-70 269.2 432 42.6
Ca_20251_v3 Cicer arietinum L. HOM05D006075 ORTHO05D007527 3.2e-60 236.9 162 72.8
TAR636G1294 Trochodendron aralioides HOM05D006075 ORTHO05D007527 7.5e-49 199.1 157 65.6
AUR62017286 Chenopodium quinoa HOM05D006075 ORTHO05D007527 8.6e-45 185.7 186 59.1
MCO15G123 Micromonas commoda HOM05D006075 ORTHO05D007527 1.3e-37 161.8 455 29.2
AUR62010644 Chenopodium quinoa HOM05D006075 ORTHO05D007527 6.2e-35 152.9 187 49.7
TAR636G2798 Trochodendron aralioides HOM05D006075 ORTHO05D007527 1.2e-30 138.7 67 97.0
C09p15950 Brassica napus HOM05D006075 ORTHO05D007527 4.6e-30 136.7 88 75.0
PRCOL_00005762 Prasinoderma coloniale HOM05D006075 ORTHO05D007527 7.8e-30 136.0 518 25.7
Eucgr.H02816 Eucalyptus grandis HOM05D005128 ORTHO05D006227 1.8e-26 124.8 98 61.2
ATR0322G060 Amborella trichopoda HOM05D006075 ORTHO05D007527 1.7e-24 118.2 91 62.6
BolC9t54506H Brassica oleracea HOM05D006075 ORTHO05D007527 3.7e-24 117.1 105 61.0
Cre03.g150400 Chlamydomonas reinhardtii HOM05D006075 ORTHO05D007527 5.2e-18 96.7 673 22.4
Actinidia27405 Actinidia chinensis HOM05D006075 ORTHO05D007527 1.9e-12 78.2 64 64.1
Pp3c15_22645 Physcomitrium patens HOM05D006075 ORTHO05D007527 4.7e-11 73.6 113 39.8
Lsat_1_v5_gn_5_145360 Lactuca sativa HOM05D000561 ORTHO05D008162 3.1e-10 70.9 75 49.3


User provided reference genes

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