Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G138500 Carya illinoinensis HOM05D008852 ORTHO05D010731 2.3e-41 171.8 86 100.0
CiPaw.12G095900 Carya illinoinensis HOM05D008852 ORTHO05D010731 1.1e-22 109.8 86 66.3
Cfa012137 Carpinus fangiana HOM05D008852 ORTHO05D010731 3.8e-20 101.3 86 61.6
Haze_08906 Corylus avellana HOM05D008852 ORTHO05D010731 1.9e-19 99.0 86 62.8
Haze_08910 Corylus avellana HOM05D008852 ORTHO05D010731 1.9e-19 99.0 86 62.8
QL12p017912 Quercus lobata HOM05D008852 ORTHO05D010731 1.6e-18 95.9 85 58.8
Potri.001G107400 Populus trichocarpa HOM05D008852 ORTHO05D010731 1.1e-14 83.2 81 54.3
Hma1.2p1_0514F.1_g169790 Hydrangea macrophylla HOM05D008852 ORTHO05D010731 1.4e-14 82.8 87 51.7
Hma1.2p1_3255F.1_g334555 Hydrangea macrophylla HOM05D008852 ORTHO05D010731 1.4e-14 82.8 87 51.7
Manes.02G024700 Manihot esculenta HOM05D008852 ORTHO05D010731 3.5e-13 78.2 80 50.0
Prupe.5G095200 Prunus persica HOM05D008852 ORTHO05D010731 4.5e-13 77.8 87 52.9
Potri.003G124000 Populus trichocarpa HOM05D008852 ORTHO05D010731 3.8e-12 74.7 82 48.8
Lalb_Chr05g0224961 Lupinus albus HOM05D008852 ORTHO05D010731 2.5e-11 72.0 88 45.5
Manes.01G064900 Manihot esculenta HOM05D008852 ORTHO05D010731 2.5e-11 72.0 80 46.2
Thecc.03G275000 Theobroma cacao HOM05D008852 ORTHO05D010731 3.3e-11 71.6 80 46.2
Phvul.002G287300 Phaseolus vulgaris HOM05D008852 ORTHO05D010731 9.5e-11 70.1 90 46.7
DCAR_008411 Daucus carota HOM05D008852 ORTHO05D010731 1.6e-10 69.3 86 43.0
Glyma.05G205400 Glycine max HOM05D008852 ORTHO05D010731 3.6e-10 68.2 88 45.5
Ciclev10023081m.g Citrus clementina HOM05D008852 ORTHO05D010731 4.7e-10 67.8 84 46.4
Medtr8g096970 Medicago truncatula HOM05D008852 ORTHO05D010731 3.0e-09 65.1 90 45.6
Potri.002G228000 Populus trichocarpa HOM05D008852 ORTHO05D010731 3.0e-09 65.1 82 45.1
Glyma.08G012300 Glycine max HOM05D008852 ORTHO05D010731 2.6e-08 62.0 88 42.0
Gohir.D08G198700 Gossypium hirsutum HOM05D008852 ORTHO05D010731 2.6e-08 62.0 83 42.2
Gohir.A08G179900 Gossypium hirsutum HOM05D008852 ORTHO05D010731 3.4e-08 61.6 83 42.2
Gorai.004G209500 Gossypium raimondii HOM05D008852 ORTHO05D010731 3.4e-08 61.6 83 42.2
Eucgr.D01882 Eucalyptus grandis HOM05D008852 ORTHO05D010731 4.4e-08 61.2 81 42.0
COL.COLO4_34424 Corchorus olitorius HOM05D008852 ORTHO05D010731 1.7e-07 59.3 77 41.6
Cc08_g14310 Coffea canephora HOM05D008852 ORTHO05D010731 2.2e-07 58.9 89 42.7
Lj4g0016563 Lotus japonicus HOM05D008852 ORTHO05D010731 2.2e-07 58.9 90 41.1
CSS0030299 Camellia sinensis var. sinensis HOM05D012645 ORTHO05D010731 8.3e-07 57.0 87 37.9
Rhsim03G0179400 Rhododendron simsii HOM05D019148 ORTHO05D019092 1.8e-06 55.8 88 38.6
Nn1g01419 Nelumbo nucifera HOM05D008852 ORTHO05D010731 4.1e-06 54.7 79 44.3
Rhsim02G0221200 Rhododendron simsii HOM05D008852 ORTHO05D010731 4.1e-06 54.7 83 43.4


User provided reference genes

Program Settings