Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G134900 Carya illinoinensis HOM05D005411 ORTHO05D006463 1.2e-98 363.2 192 100.0
Prupe.5G100600 Prunus persica HOM05D005411 ORTHO05D006463 5.7e-56 221.5 159 76.1
RcHm_v2.0_Chr7g0197541 Rosa chinensis HOM05D005411 ORTHO05D006463 4.8e-55 218.4 147 76.9
Manes.02G019300 Manihot esculenta HOM05D005411 ORTHO05D006463 1.1e-54 217.2 160 73.8
MD06G1084200 Malus domestica HOM05D005411 ORTHO05D006463 3.1e-54 215.7 161 73.3
QL12p032900 Quercus lobata HOM05D005411 ORTHO05D006463 5.5e-51 204.9 147 76.9
MD14G1105400 Malus domestica HOM05D005411 ORTHO05D006463 9.4e-51 204.1 148 75.0
Gorai.003G158500 Gossypium raimondii HOM05D005411 ORTHO05D006463 3.6e-50 202.2 155 72.3
GSVIVG01019751001 Vitis vinifera HOM05D005411 ORTHO05D006463 2.3e-49 199.5 149 73.8
CiPaw.12G092800 Carya illinoinensis HOM05D005411 ORTHO05D006463 2.0e-48 196.4 156 70.5
Gohir.A03G016600 Gossypium hirsutum HOM05D005411 ORTHO05D006463 2.6e-48 196.1 155 70.3
Eucgr.H02261 Eucalyptus grandis HOM05D005411 ORTHO05D006463 4.4e-48 195.3 146 74.0
FvH4_5g02510 Fragaria vesca HOM05D005411 ORTHO05D006463 7.4e-48 194.5 202 57.4
CSS0034062 Camellia sinensis var. sinensis HOM05D005411 ORTHO05D006463 9.7e-48 194.1 156 69.9
Eucgr.L02732 Eucalyptus grandis HOM05D005411 ORTHO05D006463 1.3e-47 193.7 146 73.3
CANSAT78G0141 Cannabis sativa HOM05D005411 ORTHO05D006463 1.7e-47 193.4 165 65.5
Sed0017646 Sechium edule HOM05D005411 ORTHO05D006463 1.7e-47 193.4 153 67.3
Ciclev10022634m.g Citrus clementina HOM05D005411 ORTHO05D006463 2.8e-47 192.6 154 68.2
Hma1.2p1_0377F.1_g139300 Hydrangea macrophylla HOM05D005411 ORTHO05D006463 3.7e-47 192.2 150 70.7
TWI60G1258 Tripterygium wilfordii HOM05D005411 ORTHO05D006463 8.2e-47 191.0 157 68.2
Actinidia02004 Actinidia chinensis HOM05D005411 ORTHO05D006463 3.1e-46 189.1 154 70.8
Dinv38939 Davidia involucrata HOM05D005411 ORTHO05D006463 3.1e-46 189.1 152 70.4
Dinv38942 Davidia involucrata HOM05D005411 ORTHO05D006463 5.3e-46 188.3 152 70.4
PGR042G1580 Punica granatum HOM05D005411 ORTHO05D006463 5.3e-46 188.3 181 60.8
Potri.001G103800 Populus trichocarpa HOM05D005411 ORTHO05D006463 9.1e-46 187.6 160 66.9
Cfa012226 Carpinus fangiana HOM05D005411 ORTHO05D006463 3.4e-45 185.7 126 78.6
ClCG07G008090 Citrullus lanatus HOM05D005411 ORTHO05D006463 6.5e-44 181.4 111 82.9
PSO478G4730 Papaver somniferum HOM05D005411 ORTHO05D006463 6.5e-44 181.4 150 64.7
PSO782G3895 Papaver somniferum HOM05D005411 ORTHO05D006463 6.5e-44 181.4 150 64.7
MBI18_g42863_MAGBIO Magnolia biondii HOM05D005411 ORTHO05D006463 1.1e-43 180.6 146 67.8
CsaV3_4G005950 Cucumis sativus L. HOM05D005411 ORTHO05D006463 1.4e-43 180.3 157 62.4
FAN04G3034 Fragaria x ananassa HOM05D005411 ORTHO05D006463 4.2e-43 178.7 138 68.8
Nitab4.5_0013184g0010 Nicotiana tabacum HOM05D005411 ORTHO05D006463 4.2e-43 178.7 121 76.0
Actinidia14564 Actinidia chinensis HOM05D005411 ORTHO05D006463 5.5e-43 178.3 145 67.6
Phvul.002G289800 Phaseolus vulgaris HOM05D005411 ORTHO05D006463 5.5e-43 178.3 134 71.6
FAN13G2772 Fragaria x ananassa HOM05D005411 ORTHO05D006463 7.2e-43 177.9 138 68.8
Lalb_Chr09g0332851 Lupinus albus HOM05D005411 ORTHO05D006463 7.2e-43 177.9 111 82.0
Cc08_g14780 Coffea canephora HOM05D005411 ORTHO05D006463 9.4e-43 177.6 109 83.5
Nitab4.5_0001615g0100 Nicotiana tabacum HOM05D005411 ORTHO05D006463 1.6e-42 176.8 121 73.6
Peaxi162Scf00119g00941 Petunia axillaris HOM05D005411 ORTHO05D006463 2.1e-42 176.4 147 65.3
HanXRQChr13g0394241 Helianthus annuus HOM05D005411 ORTHO05D006463 4.7e-42 175.3 140 67.9
FAN08G0497 Fragaria x ananassa HOM05D005411 ORTHO05D006463 6.1e-42 174.9 138 68.1
Solyc08g081130.4 Solanum lycopersicum HOM05D005411 ORTHO05D006463 8.0e-42 174.5 123 74.0
Sopen08g029430 Solanum pennellii HOM05D005411 ORTHO05D006463 8.0e-42 174.5 123 74.0
PGSC0003DMG403012339 Solanum tuberosum HOM05D005411 ORTHO05D006463 8.0e-42 174.5 123 74.0
Lsat_1_v5_gn_6_6580 Lactuca sativa HOM05D005411 ORTHO05D006463 1.0e-41 174.1 165 59.4
ECA233G5385 Erigeron canadensis HOM05D005411 ORTHO05D006463 1.4e-41 173.7 114 78.1
Migut.A00759 Erythranthe guttata HOM05D005411 ORTHO05D006463 2.3e-41 172.9 121 73.6
CAN.G774.50 Capsicum annuum HOM05D005411 ORTHO05D006463 1.1e-40 170.6 151 61.6
Thhalv10026496m.g Eutrema salsugineum HOM05D005411 ORTHO05D006463 1.1e-40 170.6 139 65.5
Oeu011043.2 Olea europaea HOM05D005411 ORTHO05D006463 3.3e-40 169.1 118 75.4
BcaC09g51012 Brassica carinata HOM05D005411 ORTHO05D006463 7.4e-40 167.9 147 63.3
BolC1t01733H Brassica oleracea HOM05D005411 ORTHO05D006463 7.4e-40 167.9 147 63.3
TAR374G0701 Trochodendron aralioides HOM05D005411 ORTHO05D006463 7.4e-40 167.9 143 65.7
A01p14570 Brassica napus HOM05D005411 ORTHO05D006463 1.3e-39 167.2 147 62.6
BraA01t01399Z Brassica rapa HOM05D005411 ORTHO05D006463 1.3e-39 167.2 147 62.6
vmacro11335 Vaccinium macrocarpon HOM05D005411 ORTHO05D006463 2.2e-39 166.4 180 56.7
BraA03t14482Z Brassica rapa HOM05D000022 ORTHO05D000071 2.8e-39 166.0 141 65.2
THA.LOC104814574 Tarenaya hassleriana HOM05D005411 ORTHO05D006463 4.8e-39 165.2 114 75.4
Medtr8g098255 Medicago truncatula HOM05D005411 ORTHO05D006463 1.1e-38 164.1 112 75.9
SalBow4G3209 Salvia bowleyana HOM05D005411 ORTHO05D006463 1.4e-38 163.7 122 68.9
Thecc.03G279100 Theobroma cacao HOM05D005411 ORTHO05D006463 1.4e-38 163.7 133 67.7
vmacro13959 Vaccinium macrocarpon HOM05D005411 ORTHO05D006463 1.4e-38 163.7 170 58.8
AL7G30140 Arabidopsis lyrata HOM05D005411 ORTHO05D006463 1.8e-38 163.3 136 64.7
Nn1g01526 Nelumbo nucifera HOM05D005411 ORTHO05D006463 1.8e-38 163.3 139 61.9
vmacro22820 Vaccinium macrocarpon HOM05D005411 ORTHO05D006463 1.8e-38 163.3 169 59.2
ATR0680G335 Amborella trichopoda HOM05D005411 ORTHO05D006463 2.4e-38 162.9 107 77.6
AT4G23330 Arabidopsis thaliana HOM05D005411 ORTHO05D006463 4.1e-38 162.2 126 69.8
Carub.0007s1784 Capsella rubella HOM05D005411 ORTHO05D006463 4.1e-38 162.2 147 63.3
Psat7g033000 Pisum sativum HOM05D005411 ORTHO05D006463 5.3e-38 161.8 110 73.6
BcaNung01456 Brassica carinata HOM05D005411 ORTHO05D006463 9.1e-38 161.0 142 63.4
C07p52580 Brassica napus HOM05D000022 ORTHO05D000071 9.1e-38 161.0 142 63.4
BolC7t45755H Brassica oleracea HOM05D005411 ORTHO05D006463 9.1e-38 161.0 142 63.4
A03p54210 Brassica napus HOM05D005411 ORTHO05D006463 1.2e-37 160.6 138 64.5
MSTRG.25610 Avicennia marina HOM05D005411 ORTHO05D006463 1.6e-37 160.2 154 59.1
CARHR230670 Cardamine hirsuta HOM05D005411 ORTHO05D006463 1.6e-37 160.2 145 62.1
BcaNung03266 Brassica carinata HOM05D005411 ORTHO05D006463 2.0e-37 159.8 141 61.7
Lj4g0004308 Lotus japonicus HOM05D005411 ORTHO05D006463 2.0e-37 159.8 135 65.2
FAN18G0348 Fragaria x ananassa HOM05D005411 ORTHO05D006463 2.6e-37 159.5 91 89.0
TPR.G12871 Trifolium pratense HOM05D005411 ORTHO05D006463 3.5e-37 159.1 107 75.7
BcaC03g18356 Brassica carinata HOM05D005411 ORTHO05D006463 4.5e-37 158.7 112 74.1
C02p64340 Brassica napus HOM05D005411 ORTHO05D006463 4.5e-37 158.7 112 74.1
Ca_17530_v3 Cicer arietinum L. HOM05D005411 ORTHO05D006463 1.0e-36 157.5 159 56.6
Lj8E221T1 Lonicera japonica HOM05D005411 ORTHO05D006463 2.9e-36 156.0 103 77.7
Sabra01G0078400 Salix brachista HOM05D005411 ORTHO05D006463 1.5e-35 153.7 129 68.2
MELO3C016353.2 Cucumis melo HOM05D005411 ORTHO05D006463 3.2e-35 152.5 135 62.2
Duzib205G1808 Durio zibethinus HOM05D005411 ORTHO05D006463 7.2e-35 151.4 165 53.9
unitig_46.g18551 Utricularia gibba HOM05D005411 ORTHO05D006463 3.6e-34 149.1 121 65.3
Rhsim07G0090400 Rhododendron simsii HOM05D005411 ORTHO05D006463 4.7e-34 148.7 130 65.4
Aqoxy7G00317 Aquilegia oxysepala HOM05D005411 ORTHO05D006463 1.0e-33 147.5 126 61.9
Os07g0483400 Oryza sativa ssp. japonica HOM05D005411 ORTHO05D006463 1.0e-33 147.5 109 67.0
SGA_v2.0_scaffold173G39183 Striga asiatica HOM05D005411 ORTHO05D006463 1.0e-33 147.5 127 63.0
arahy.Tifrunner.gnm1.ann1.FJ1DNZ Arachis hypogaea HOM05D005411 ORTHO05D006463 1.5e-32 143.7 138 58.0
arahy.Tifrunner.gnm1.ann1.P2DUDW Arachis hypogaea HOM05D005411 ORTHO05D006463 1.5e-32 143.7 138 58.0
Hund16039 Selenicereus undatus HOM05D005411 ORTHO05D006463 3.3e-32 142.5 103 68.9
Glyma.05G208200 Glycine max HOM05D005411 ORTHO05D006463 5.7e-32 141.7 137 59.1
AUR62022799 Chenopodium quinoa HOM05D005411 ORTHO05D006463 7.5e-32 141.4 114 62.3
Gohir.D03G151300 Gossypium hirsutum HOM05D005411 ORTHO05D006463 6.3e-31 138.3 118 66.1
VMungo0251G3187 Vigna mungo HOM05D005411 ORTHO05D006463 1.1e-30 137.5 113 66.4
Aa31LG9G10800 Aethionema arabicum HOM05D005411 ORTHO05D006463 3.1e-30 136.0 119 62.2
CDE11G0686 Ceratophyllum demersum HOM05D003133 ORTHO05D006463 9.1e-30 134.4 89 74.2
SEGI_09083 Sequoiadendron giganteum HOM05D005411 ORTHO05D006463 6.5e-28 128.3 105 61.9
AUR62012163 Chenopodium quinoa HOM05D005411 ORTHO05D006463 6.1e-26 121.7 153 47.1
BcaNung00981 Brassica carinata HOM05D005411 ORTHO05D006463 1.8e-25 120.2 160 49.4
BolC5t34770H Brassica oleracea HOM05D005411 ORTHO05D006463 4.0e-25 119.0 94 69.1
EL10Ac2g04672 Beta vulgaris HOM05D005411 ORTHO05D006463 8.8e-25 117.9 89 64.0
Zm00001eb104990 Zea mays HOM05D005411 ORTHO05D006463 8.8e-25 117.9 83 68.7
C01p18020 Brassica napus HOM05D005411 ORTHO05D006463 1.5e-24 117.1 127 54.3
Sc01g0009600 Simmondsia chinensis HOM05D005411 ORTHO05D006463 3.7e-23 112.5 78 69.2
CDE09G0994 Ceratophyllum demersum HOM05D005411 ORTHO05D006463 8.3e-23 111.3 109 56.0
Pp3c11_2200 Physcomitrium patens HOM05D005411 ORTHO05D006463 9.1e-22 107.8 102 53.9
BcaNung00977 Brassica carinata HOM05D005411 ORTHO05D006463 1.6e-21 107.1 68 76.5
Atru.chr9.2185 Acer truncatum HOM05D005411 ORTHO05D006463 3.8e-20 102.4 93 58.1
Hma1.2p1_0377F.1_g139290 Hydrangea macrophylla HOM05D005411 ORTHO05D006463 6.6e-20 101.7 95 64.2
Mapoly0008s0209 Marchantia polymorpha HOM05D005411 ORTHO05D006463 8.6e-20 101.3 99 48.5
Duzib084G0828 Durio zibethinus HOM05D005411 ORTHO05D006463 1.5e-19 100.5 143 42.7
CSS0044618 Camellia sinensis var. sinensis HOM05D005411 ORTHO05D006463 1.2e-18 97.4 107 57.0
Potri.003G127900 Populus trichocarpa HOM05D005411 ORTHO05D006463 1.2e-18 97.4 136 47.8
AagrBONN_evm.TU.Sc2ySwM_369.479 Anthoceros agrestis HOM05D005411 ORTHO05D006463 1.4e-17 94.0 84 54.8
SHI07138 Sapria himalayana HOM05D005411 ORTHO05D006463 6.8e-17 91.7 62 72.6
Oeu047371.1 Olea europaea HOM05D005411 ORTHO05D006463 1.2e-16 90.9 71 66.2
Sabra17G0003100 Salix brachista HOM05D005411 ORTHO05D006463 1.2e-13 80.9 93 52.7
Sabra17G0003800 Salix brachista HOM05D005411 ORTHO05D006463 1.2e-13 80.9 93 52.7
Sabra18G0123000 Salix brachista HOM05D005411 ORTHO05D006463 4.5e-13 79.0 93 51.6
BcaC01g04135 Brassica carinata HOM05D005411 ORTHO05D006463 1.0e-12 77.8 56 67.9
SMO329G0027 Selaginella moellendorffii HOM05D005411 ORTHO05D006463 1.3e-12 77.4 73 53.4
SMO358G0504 Selaginella moellendorffii HOM05D005411 ORTHO05D006463 1.3e-12 77.4 73 53.4
BolC3t16740H Brassica oleracea HOM05D005411 ORTHO05D006463 1.7e-12 77.0 68 63.2
Sabra14G0123800 Salix brachista HOM05D005411 ORTHO05D006463 1.7e-12 77.0 93 50.5
C03p44770 Brassica napus HOM05D005411 ORTHO05D006463 2.9e-12 76.3 68 63.2
COL.COLO4_34468 Corchorus olitorius HOM05D005411 ORTHO05D006463 6.6e-12 75.1 85 51.8
Eucgr.H02258 Eucalyptus grandis HOM05D005411 ORTHO05D006463 3.3e-11 72.8 71 62.0
Sabra17G0034500 Salix brachista HOM05D005411 ORTHO05D006463 1.2e-10 70.9 114 43.0
HPP92_001497 Vanilla planifolia HOM05D005411 ORTHO05D006463 2.8e-10 69.7 46 69.6
BcaB05g22557 Brassica carinata HOM05D002513 ORTHO05D002720 6.1e-10 68.6 83 51.8
Sabra11G0012500 Salix brachista HOM05D005411 ORTHO05D006463 7.5e-08 61.6 84 47.6
CSS0004409 Camellia sinensis var. sinensis HOM05D005411 ORTHO05D006463 6.4e-07 58.5 72 50.0
CSS0027281 Camellia sinensis var. sinensis HOM05D005411 ORTHO05D006463 6.4e-07 58.5 72 50.0
Sabra05G0164800 Salix brachista HOM05D005411 ORTHO05D006463 1.1e-06 57.8 84 45.2
Hund13808 Selenicereus undatus HOM05D005411 ORTHO05D006463 2.4e-06 56.6 46 65.2


User provided reference genes

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