Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G134300 Carya illinoinensis HOM05D008679 ORTHO05D010804 2.0e-221 772.3 435 100.0
Cfa012221 Carpinus fangiana HOM05D008679 ORTHO05D010804 6.9e-110 401.7 481 55.3
QL12p032781 Quercus lobata HOM05D008679 ORTHO05D010804 9.1e-102 374.8 491 50.5
Prupe.5G101200 Prunus persica HOM05D008679 ORTHO05D010804 7.3e-67 258.8 476 42.4
RcHm_v2.0_Chr7g0197481 Rosa chinensis HOM05D008679 ORTHO05D010804 4.9e-63 246.1 502 35.9
Haze_08788 Corylus avellana HOM05D005554 ORTHO05D007823 1.5e-59 234.6 356 51.4
Potri.001G103200 Populus trichocarpa HOM05D008679 ORTHO05D010804 1.6e-58 231.1 477 33.8
Thecc.03G280000 Theobroma cacao HOM05D008679 ORTHO05D010804 6.2e-58 229.2 457 39.6
Dinv38933 Davidia involucrata HOM05D008679 ORTHO05D010804 4.0e-57 226.5 411 36.3
Manes.02G019900 Manihot esculenta HOM05D008679 ORTHO05D010804 4.4e-56 223.0 475 35.8
FAN08G1707 Fragaria x ananassa HOM05D008679 ORTHO05D010804 4.9e-55 219.5 507 33.1
FAN13G2706 Fragaria x ananassa HOM05D005554 ORTHO05D007823 1.1e-54 218.4 494 35.4
Potri.003G128400 Populus trichocarpa HOM05D008679 ORTHO05D010804 5.4e-54 216.1 468 35.0
Duzib205G1921 Durio zibethinus HOM05D008679 ORTHO05D010804 4.6e-53 213.0 484 37.0
FAN04G2302 Fragaria x ananassa HOM05D008679 ORTHO05D010804 6.0e-53 212.6 506 33.6
Ciclev10019505m.g Citrus clementina HOM05D008679 ORTHO05D010804 8.6e-52 208.8 463 35.9
FvH4_5g02611 Fragaria vesca HOM05D008679 ORTHO05D010804 5.6e-51 206.1 494 34.8
Dinv37632 Davidia involucrata HOM05D008679 ORTHO05D010804 1.6e-50 204.5 240 45.8
FAN18G1823 Fragaria x ananassa HOM05D008679 ORTHO05D010804 3.6e-50 203.4 494 34.8
Actinidia14568 Actinidia chinensis HOM05D008679 ORTHO05D010804 6.2e-50 202.6 418 34.9
Sabra01G0077900 Salix brachista HOM05D008679 ORTHO05D010804 1.8e-49 201.1 498 30.7
TAR375G0988 Trochodendron aralioides HOM05D008679 ORTHO05D010804 6.8e-49 199.1 431 33.9
Hma1.2p1_0896F.1_g234080 Hydrangea macrophylla HOM05D008679 ORTHO05D010804 7.6e-48 195.7 435 32.9
TWI15G0527 Tripterygium wilfordii HOM05D008679 ORTHO05D010804 9.9e-48 195.3 448 33.3
Rhsim02G0231800 Rhododendron simsii HOM05D008679 ORTHO05D010804 7.1e-46 189.1 417 33.3
Duzib084G0348 Durio zibethinus HOM05D008679 ORTHO05D010804 4.6e-45 186.4 470 36.4
Actinidia01999 Actinidia chinensis HOM05D008679 ORTHO05D010804 2.5e-43 180.6 430 32.3
TAR374G0287 Trochodendron aralioides HOM05D008679 ORTHO05D010804 7.3e-43 179.1 429 30.5
vmacro11364 Vaccinium macrocarpon HOM05D005554 ORTHO05D007823 3.8e-39 166.8 437 30.9
MD06G1085200 Malus domestica HOM05D008679 ORTHO05D010804 7.1e-38 162.5 407 33.2
Cpa.g.sc74.7 Carica papaya HOM05D008679 ORTHO05D010804 1.1e-35 155.2 439 33.9
Lj2P184T43 Lonicera japonica HOM05D008679 ORTHO05D010804 7.3e-35 152.5 433 29.3
Gohir.D12G231200 Gossypium hirsutum HOM05D008679 ORTHO05D010804 9.3e-30 135.6 464 28.0
Gorai.008G247400 Gossypium raimondii HOM05D008679 ORTHO05D010804 1.1e-27 128.6 464 27.6
Sabra03G0091300 Salix brachista HOM05D008679 ORTHO05D010804 6.9e-25 119.4 188 38.3
Gohir.A12G230100 Gossypium hirsutum HOM05D008679 ORTHO05D010804 1.4e-22 111.7 462 26.6
COL.COLO4_34476 Corchorus olitorius HOM05D008679 ORTHO05D010804 1.2e-21 108.6 460 31.7
DCAR_000618 Daucus carota HOM05D008679 ORTHO05D010804 6.7e-20 102.8 431 26.5
MBI17_g24686_MAGBIO Magnolia biondii HOM05D008679 ORTHO05D010804 6.9e-17 92.8 229 32.8


User provided reference genes

Program Settings