Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G126100 Carya illinoinensis HOM05D007339 ORTHO05D009302 1.3e-174 616.3 313 100.0
Cfa012282 Carpinus fangiana HOM05D007339 ORTHO05D009302 2.5e-141 505.8 371 71.4
QL02p032076 Quercus lobata HOM05D007339 ORTHO05D009302 4.8e-129 464.9 368 66.3
Prupe.5G112000 Prunus persica HOM05D007339 ORTHO05D009302 2.9e-126 455.7 342 66.7
FAN08G0386 Fragaria x ananassa HOM05D007339 ORTHO05D009302 1.1e-125 453.8 363 62.5
MD14G1117300 Malus domestica HOM05D007339 ORTHO05D009302 2.5e-125 452.6 369 63.4
FAN04G0801 Fragaria x ananassa HOM05D007339 ORTHO05D009302 3.2e-125 452.2 363 62.5
Haze_08703 Corylus avellana HOM05D007339 ORTHO05D009302 5.5e-125 451.4 371 66.0
TAR629G0408 Trochodendron aralioides HOM05D007339 ORTHO05D009302 5.7e-122 441.4 361 64.3
Gohir.D12G235400 Gossypium hirsutum HOM05D007339 ORTHO05D009302 2.2e-121 439.5 359 63.5
Gorai.008G251600 Gossypium raimondii HOM05D007339 ORTHO05D009302 6.3e-121 438.0 359 63.5
CANSAT21G2628 Cannabis sativa HOM05D007339 ORTHO05D009302 1.4e-120 436.8 365 60.3
CSS0003086 Camellia sinensis var. sinensis HOM05D007339 ORTHO05D009302 3.1e-120 435.6 370 60.5
FAN13G2341 Fragaria x ananassa HOM05D007339 ORTHO05D009302 3.1e-120 435.6 363 61.4
COL.COLO4_21749 Corchorus olitorius HOM05D007339 ORTHO05D009302 7.0e-120 434.5 361 62.0
Dinv37563 Davidia involucrata HOM05D007339 ORTHO05D009302 5.9e-119 431.4 396 57.6
Potri.003G135200 Populus trichocarpa HOM05D007339 ORTHO05D009302 2.2e-118 429.5 360 61.9
Actinidia01410 Actinidia chinensis HOM05D007339 ORTHO05D009302 8.5e-118 427.6 352 63.6
Lj2A174T87 Lonicera japonica HOM05D007339 ORTHO05D009302 2.7e-116 422.5 336 64.0
Nn1g08390 Nelumbo nucifera HOM05D007339 ORTHO05D009302 2.7e-116 422.5 361 59.6
Sabra03G0097300 Salix brachista HOM05D007339 ORTHO05D009302 3.6e-116 422.2 364 59.6
TWI60G1048 Tripterygium wilfordii HOM05D007339 ORTHO05D009302 3.6e-116 422.2 358 60.3
Rhsim02G0238900 Rhododendron simsii HOM05D007339 ORTHO05D009302 1.4e-115 420.2 362 57.7
vmacro11423 Vaccinium macrocarpon HOM05D007339 ORTHO05D009302 2.3e-115 419.5 352 60.2
Oeu008834.1 Olea europaea HOM05D007339 ORTHO05D009302 3.9e-115 418.7 365 59.5
GSVIVG01019463001 Vitis vinifera HOM05D007339 ORTHO05D009302 3.3e-114 415.6 338 61.5
Lalb_Chr05g0224341 Lupinus albus HOM05D007339 ORTHO05D009302 6.3e-113 411.4 366 56.8
arahy.Tifrunner.gnm1.ann1.3U28WJ Arachis hypogaea HOM05D007339 ORTHO05D009302 1.1e-112 410.6 351 59.8
FAN13G1997 Fragaria x ananassa HOM05D007339 ORTHO05D009302 3.1e-112 409.1 363 58.7
ClCG11G007690 Citrullus lanatus HOM05D007339 ORTHO05D009302 5.3e-112 408.3 360 58.9
Cc08_g15580 Coffea canephora HOM05D007339 ORTHO05D009302 9.1e-112 407.5 355 59.7
CsaV3_2G033870 Cucumis sativus L. HOM05D007339 ORTHO05D009302 1.2e-111 407.1 360 58.3
Lj4g0000586 Lotus japonicus HOM05D007339 ORTHO05D009302 2.0e-111 406.4 356 59.0
LjContig00001g0019220 Lotus japonicus HOM05D007339 ORTHO05D009302 2.0e-111 406.4 356 59.0
LjContig00001g0022561 Lotus japonicus HOM05D007339 ORTHO05D009302 2.0e-111 406.4 356 59.0
MELO3C008161.2 Cucumis melo HOM05D007339 ORTHO05D009302 2.6e-111 406.0 360 58.6
arahy.Tifrunner.gnm1.ann1.XUAZ2L Arachis hypogaea HOM05D007339 ORTHO05D009302 4.5e-111 405.2 349 59.0
Cpa.g.c31793 Carica papaya HOM05D007339 ORTHO05D009302 1.3e-110 403.7 353 58.6
Glyma.05G213600 Glycine max HOM05D007339 ORTHO05D009302 1.7e-110 403.3 354 58.8
Eucgr.D01785 Eucalyptus grandis HOM05D007339 ORTHO05D009302 2.2e-110 402.9 356 56.2
Sed0025077 Sechium edule HOM05D007339 ORTHO05D009302 2.2e-110 402.9 360 58.1
Hund14247 Selenicereus undatus HOM05D007339 ORTHO05D009302 2.9e-110 402.5 348 59.8
AUR62019785 Chenopodium quinoa HOM05D007339 ORTHO05D009302 3.8e-110 402.1 350 59.1
arahy.Tifrunner.gnm1.ann1.CS5PRD Arachis hypogaea HOM05D007339 ORTHO05D009302 1.5e-109 400.2 351 58.7
DCAR_027743 Daucus carota HOM05D007339 ORTHO05D009302 1.5e-109 400.2 351 57.8
AUR62010789 Chenopodium quinoa HOM05D007339 ORTHO05D009302 1.9e-109 399.8 350 58.6
VMungo0251G0376 Vigna mungo HOM05D007339 ORTHO05D009302 2.5e-109 399.4 366 57.1
Phvul.002G295000 Phaseolus vulgaris HOM05D007339 ORTHO05D009302 3.2e-109 399.1 366 57.1
Lsat_1_v5_gn_3_9640 Lactuca sativa HOM05D007339 ORTHO05D009302 1.8e-107 393.3 350 56.9
EL10Ac5g12862 Beta vulgaris HOM05D007339 ORTHO05D009302 2.3e-107 392.9 351 58.4
Migut.E01224 Erythranthe guttata HOM05D007339 ORTHO05D009302 3.0e-107 392.5 357 57.7
Psat7g028320 Pisum sativum HOM05D007339 ORTHO05D009302 2.0e-106 389.8 362 54.7
PGR031G1180 Punica granatum HOM05D007339 ORTHO05D009302 3.3e-106 389.0 358 54.2
HanXRQChr17g0535521 Helianthus annuus HOM05D007339 ORTHO05D009302 5.7e-106 388.3 354 56.2
Ca_17504_v3 Cicer arietinum L. HOM05D007339 ORTHO05D009302 9.7e-106 387.5 354 56.2
ECA246G1762 Erigeron canadensis HOM05D007339 ORTHO05D009302 9.7e-106 387.5 354 56.2
Medtr8g099160 Medicago truncatula HOM05D007339 ORTHO05D009302 6.3e-105 384.8 357 56.6
SalBow1G6752 Salvia bowleyana HOM05D007339 ORTHO05D009302 3.1e-104 382.5 351 55.3
Manes.02G014000 Manihot esculenta HOM05D007339 ORTHO05D009302 5.3e-104 381.7 324 60.5
Nitab4.5_0002381g0050 Nicotiana tabacum HOM05D007339 ORTHO05D009302 2.0e-103 379.8 322 58.4
Sc01g0010030 Simmondsia chinensis HOM05D007339 ORTHO05D009302 3.5e-103 379.0 354 55.9
PGSC0003DMG400005010 Solanum tuberosum HOM05D007339 ORTHO05D009302 1.3e-102 377.1 363 54.0
RcHm_v2.0_Chr7g0195891 Rosa chinensis HOM05D007339 ORTHO05D009302 1.7e-102 376.7 324 58.6
Gohir.A12G231900 Gossypium hirsutum HOM05D007339 ORTHO05D009302 2.2e-102 376.3 316 62.3
Solyc12g056150.2 Solanum lycopersicum HOM05D007339 ORTHO05D009302 2.2e-102 376.3 363 53.7
SGA_v2.0_scaffold111G31453 Striga asiatica HOM05D007339 ORTHO05D009302 2.2e-102 376.3 292 63.7
Peaxi162Scf00117g01517 Petunia axillaris HOM05D007339 ORTHO05D009302 3.8e-102 375.6 340 55.0
Thecc.03G290600 Theobroma cacao HOM05D007339 ORTHO05D009302 3.8e-102 375.6 316 61.7
MBI11_g02478_MAGBIO Magnolia biondii HOM05D007339 ORTHO05D009302 1.9e-101 373.2 395 50.6
Sopen12g028660 Solanum pennellii HOM05D007339 ORTHO05D009302 2.5e-101 372.9 363 53.2
MBI11_g07997_MAGBIO Magnolia biondii HOM05D007339 ORTHO05D009302 2.1e-100 369.8 413 48.7
CAN.G868.7 Capsicum annuum HOM05D007339 ORTHO05D009302 4.7e-100 368.6 359 53.2
CDE03G0219 Ceratophyllum demersum HOM05D007339 ORTHO05D009302 1.4e-99 367.1 353 54.1
Eucgr.D01783 Eucalyptus grandis HOM05D007339 ORTHO05D009302 1.3e-97 360.5 318 56.9
Duzib068G0257 Durio zibethinus HOM05D007339 ORTHO05D009302 3.1e-96 355.9 245 72.2
QL02p032031 Quercus lobata HOM05D007339 ORTHO05D009302 2.7e-95 352.8 247 72.5
ATR0585G140 Amborella trichopoda HOM05D007339 ORTHO05D009302 5.9e-95 351.7 351 51.0
unitig_22.g6184 Utricularia gibba HOM05D007339 ORTHO05D009302 1.7e-94 350.1 351 52.1
Zm00001eb119650 Zea mays HOM05D007339 ORTHO05D009302 7.2e-93 344.7 360 49.7
HPP92_020016 Vanilla planifolia HOM05D007339 ORTHO05D009302 4.7e-92 342.0 356 49.7
Nitab4.5_0004603g0010 Nicotiana tabacum HOM05D007339 ORTHO05D009302 2.3e-91 339.7 324 54.9
Ah.07g196890 Amaranthus hybridus HOM05D007339 ORTHO05D009302 5.2e-91 338.6 314 56.1
Eucgr.D01784 Eucalyptus grandis HOM05D007339 ORTHO05D009302 6.2e-76 288.5 320 48.1
Mapoly0105s0048 Marchantia polymorpha HOM05D007339 ORTHO05D009302 6.8e-75 285.0 356 43.8
AagrBONN_evm.TU.Sc2ySwM_362.1772 Anthoceros agrestis HOM05D007339 ORTHO05D009302 5.1e-70 268.9 345 42.9
Pp3c9_13440 Physcomitrium patens HOM05D007339 ORTHO05D009302 3.1e-67 259.6 332 44.3
Atru.chr9.2070 Acer truncatum HOM05D007339 ORTHO05D009302 5.8e-66 255.4 231 58.4
TPR.G3408 Trifolium pratense HOM05D007339 ORTHO05D009302 3.7e-65 252.7 187 65.8
SMO340G0099 Selaginella moellendorffii HOM05D007339 ORTHO05D009302 2.8e-60 236.5 333 40.2
SEGI_02509 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 2.4e-43 180.3 133 64.7
SEGI_37819 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 2.4e-43 180.3 133 64.7
Atru.chr9.2069 Acer truncatum HOM05D007339 ORTHO05D009302 2.0e-42 177.2 300 36.7
Glyma.08G020200 Glycine max HOM05D007339 ORTHO05D009302 4.2e-40 169.5 211 47.4
CBR_g55541 Chara braunii HOM05D007339 ORTHO05D009302 5.4e-40 169.1 481 28.9
AagrBONN_evm.TU.Sc2ySwM_368.3145 Anthoceros agrestis HOM05D007339 ORTHO05D009302 2.2e-33 147.1 201 43.3
TPR.G11473 Trifolium pratense HOM05D007339 ORTHO05D009302 2.1e-31 140.6 178 44.9
Cre06.g285001 Chlamydomonas reinhardtii HOM05D007339 ORTHO05D009302 3.9e-22 109.8 261 30.7
QL02p032024 Quercus lobata HOM05D007339 ORTHO05D009302 5.7e-21 105.9 75 70.7
Os01g0221900 Oryza sativa ssp. japonica HOM05D007339 ORTHO05D009302 6.3e-20 102.4 89 51.7
SEGI_11472 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 2.4e-19 100.5 88 52.3
Sc20g0000110 Simmondsia chinensis HOM05D007339 ORTHO05D009302 2.6e-18 97.1 86 50.0
SEGI_02101 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 6.5e-17 92.4 74 66.2
Rhsim12G0211900 Rhododendron simsii HOM05D003090 ORTHO05D003495 9.4e-08 62.0 63 49.2


User provided reference genes

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