Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G124100 Carya illinoinensis HOM05D011767 ORTHO05D013559 3.3e-153 545.0 286 100.0
Haze_08671 Corylus avellana HOM05D002584 ORTHO05D002736 1.4e-47 194.1 332 43.7
Cfa012844 Carpinus fangiana HOM05D002584 ORTHO05D002736 9.7e-44 181.4 331 41.7
Thecc.03G292900 Theobroma cacao HOM05D011767 ORTHO05D013559 1.3e-24 117.9 362 30.4
QL02p031474 Quercus lobata HOM05D002584 ORTHO05D002736 9.4e-23 111.7 392 30.6
Duzib205G1974 Durio zibethinus HOM05D011767 ORTHO05D013559 2.0e-20 104.0 357 30.0
Dinv37552 Davidia involucrata HOM05D002584 ORTHO05D002736 2.0e-17 94.0 186 37.6
TWI81G0260 Tripterygium wilfordii HOM05D011767 ORTHO05D013559 1.0e-16 91.7 351 30.2
Manes.01G045600 Manihot esculenta HOM05D002584 ORTHO05D002736 3.8e-16 89.7 163 38.0
MD06G1101500 Malus domestica HOM05D016161 ORTHO05D019180 2.8e-14 83.6 274 31.0
Prupe.5G114900 Prunus persica HOM05D016161 ORTHO05D019180 2.8e-14 83.6 147 44.9
Gohir.D03G081600 Gossypium hirsutum HOM05D011767 ORTHO05D013559 4.0e-13 79.7 310 30.0
GSVIVG01019494001 Vitis vinifera HOM05D011767 ORTHO05D013559 8.8e-13 78.6 197 35.0
SHI07009 Sapria himalayana HOM05D011767 ORTHO05D013559 9.8e-12 75.1 158 34.8
Gorai.003G082000 Gossypium raimondii HOM05D011767 ORTHO05D013559 2.8e-11 73.6 310 28.4
CANSAT21G1170 Cannabis sativa HOM05D030939 ORTHO05D028422 4.9e-11 72.8 164 35.4
Sabra14G0028500 Salix brachista HOM05D002584 ORTHO05D002736 4.9e-11 72.8 154 33.8
Potri.014G039200 Populus trichocarpa HOM05D002584 ORTHO05D002736 6.3e-11 72.4 155 30.3
Gohir.A02G102400 Gossypium hirsutum HOM05D011767 ORTHO05D013559 2.4e-10 70.5 310 27.7
Ciclev10019635m.g Citrus clementina HOM05D002584 ORTHO05D002736 5.4e-10 69.3 324 26.5
Dinv38860 Davidia involucrata HOM05D002584 ORTHO05D002736 1.2e-09 68.2 138 39.1
Sabra01G0070500 Salix brachista HOM05D002584 ORTHO05D002736 1.2e-09 68.2 221 28.5
TWI79G0066 Tripterygium wilfordii HOM05D011767 ORTHO05D013559 1.2e-09 68.2 231 29.4
MELO3C016311.2 Cucumis melo HOM05D002584 ORTHO05D002736 1.0e-08 65.1 98 41.8
Prupe.5G115000 Prunus persica HOM05D001313 ORTHO05D001590 1.0e-08 65.1 142 38.7
ClCG07G014870 Citrullus lanatus HOM05D002584 ORTHO05D002736 2.3e-08 63.9 98 40.8
Duzib068G1104 Durio zibethinus HOM05D011767 ORTHO05D013559 2.3e-08 63.9 178 28.1
VMungo0647G1494 Vigna mungo HOM05D008692 ORTHO05D011196 5.0e-08 62.8 114 40.4
CsaV3_4G006400 Cucumis sativus L. HOM05D002584 ORTHO05D002736 2.5e-07 60.5 161 31.7
Phvul.008G277142 Phaseolus vulgaris HOM05D008692 ORTHO05D011196 2.5e-07 60.5 94 44.7
Actinidia27338 Actinidia chinensis HOM05D002584 ORTHO05D002736 4.3e-07 59.7 193 26.9
Glyma.14G015200 Glycine max HOM05D008692 ORTHO05D011196 5.6e-07 59.3 113 37.2
Medtr5g095430 Medicago truncatula HOM05D005718 ORTHO05D004853 5.6e-07 59.3 166 33.1
COL.COLO4_21722 Corchorus olitorius HOM05D011767 ORTHO05D013559 9.5e-07 58.5 196 28.1
LjContig00081g0017189 Lotus japonicus HOM05D008692 ORTHO05D011196 9.5e-07 58.5 234 27.4
Phvul.006G054000 Phaseolus vulgaris HOM05D012393 ORTHO05D014595 9.5e-07 58.5 158 32.3
Sed0024155 Sechium edule HOM05D002584 ORTHO05D002736 1.2e-06 58.2 425 24.5
Medtr5g095400 Medicago truncatula HOM05D005718 ORTHO05D004853 2.1e-06 57.4 166 32.5
Potri.006G211800 Populus trichocarpa HOM05D011767 ORTHO05D013559 2.1e-06 57.4 191 28.3
VMungo0647G1912 Vigna mungo HOM05D008692 ORTHO05D011196 2.1e-06 57.4 109 38.5
VMungo0647G0491 Vigna mungo HOM05D009155 ORTHO05D004853 3.6e-06 56.6 108 40.7
QL04p081409 Quercus lobata HOM05D046145 ORTHO05D013559 4.7e-06 56.2 56 58.9
VMungo0647G1248 Vigna mungo HOM05D008692 ORTHO05D011196 6.1e-06 55.8 109 38.5
MELO3C016310.2 Cucumis melo HOM05D002584 ORTHO05D002736 8.0e-06 55.5 161 30.4
LjContig00081g0012246 Lotus japonicus HOM05D008692 ORTHO05D011196 8.0e-06 55.5 151 33.1
Psat2g008400 Pisum sativum HOM05D008692 ORTHO05D011196 8.0e-06 55.5 166 33.1
VMungo0647G2344 Vigna mungo HOM05D000176 ORTHO05D000106 8.0e-06 55.5 220 30.5


User provided reference genes

Program Settings