Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G122000 Carya illinoinensis HOM05D007666 ORTHO05D009567 3.1e-185 651.7 352 100.0
CiPaw.12G083800 Carya illinoinensis HOM05D007666 ORTHO05D009567 8.1e-101 371.3 377 57.0
Dinv38838 Davidia involucrata HOM05D007666 ORTHO05D009567 7.2e-81 305.1 376 48.9
QL02p030815 Quercus lobata HOM05D007666 ORTHO05D009567 1.2e-72 277.7 397 47.4
Prupe.5G117900 Prunus persica HOM05D007666 ORTHO05D009567 1.1e-68 264.6 377 46.7
GSVIVG01019521001 Vitis vinifera HOM05D007666 ORTHO05D009567 1.4e-68 264.2 378 43.4
MD06G1105600 Malus domestica HOM05D007666 ORTHO05D009567 3.4e-67 259.6 377 45.9
CSS0011760 Camellia sinensis var. sinensis HOM05D007666 ORTHO05D009567 3.9e-63 246.1 380 43.2
Cpa.g.sc79.41 Carica papaya HOM05D007666 ORTHO05D009567 3.9e-63 246.1 374 44.9
Rhsim02G0242700 Rhododendron simsii HOM05D007666 ORTHO05D009567 3.9e-63 246.1 368 45.9
Ciclev10020669m.g Citrus clementina HOM05D007666 ORTHO05D009567 2.8e-61 240.0 375 43.7
Sabra03G0100600 Salix brachista HOM05D007666 ORTHO05D009567 5.3e-60 235.7 364 42.9
Potri.003G139400 Populus trichocarpa HOM05D007666 ORTHO05D009567 9.1e-60 235.0 363 44.1
Potri.001G092300 Populus trichocarpa HOM05D007666 ORTHO05D009567 1.2e-59 234.6 363 45.5
ClCG07G014990 Citrullus lanatus HOM05D007666 ORTHO05D009567 8.5e-58 228.4 382 45.8
Atru.chr9.2008 Acer truncatum HOM05D007666 ORTHO05D009567 2.5e-57 226.9 385 42.6
FAN08G0521 Fragaria x ananassa HOM05D007666 ORTHO05D009567 5.5e-57 225.7 379 43.3
MELO3C016286.2 Cucumis melo HOM05D007666 ORTHO05D009567 1.6e-56 224.2 380 45.3
Hma1.2p1_0229F.1_g097150 Hydrangea macrophylla HOM05D007666 ORTHO05D009567 8.8e-55 218.4 375 42.1
Thecc.03G296800 Theobroma cacao HOM05D007666 ORTHO05D009567 1.1e-54 218.0 213 52.1
FvH4_5g04480 Fragaria vesca HOM05D007666 ORTHO05D009567 3.3e-54 216.5 381 42.5
CsaV3_4G006520 Cucumis sativus L. HOM05D007666 ORTHO05D009567 5.7e-54 215.7 377 43.8
FAN13G3316 Fragaria x ananassa HOM05D007666 ORTHO05D009567 1.3e-53 214.5 381 42.3
FAN18G0717 Fragaria x ananassa HOM05D007666 ORTHO05D009567 1.3e-53 214.5 381 42.3
FAN18G2245 Fragaria x ananassa HOM05D007666 ORTHO05D009567 1.4e-52 211.1 381 42.3
Sed0008321 Sechium edule HOM05D007666 ORTHO05D009567 4.1e-52 209.5 385 43.9
Duzib068G1371 Durio zibethinus HOM05D007666 ORTHO05D009567 5.3e-52 209.1 263 45.6
Actinidia22150 Actinidia chinensis HOM05D007666 ORTHO05D009567 9.1e-52 208.4 338 45.0
RcHm_v2.0_Chr7g0195021 Rosa chinensis HOM05D007666 ORTHO05D009567 1.6e-51 207.6 379 42.2
Gorai.003G080900 Gossypium raimondii HOM05D007666 ORTHO05D009567 2.0e-51 207.2 218 49.5
Gohir.D03G082600 Gossypium hirsutum HOM05D007666 ORTHO05D009567 3.5e-51 206.5 218 49.5
Aqoxy5G04207 Aquilegia oxysepala HOM05D007666 ORTHO05D009567 2.9e-50 203.4 364 40.4
Manes.01G049375 Manihot esculenta HOM05D007666 ORTHO05D009567 1.9e-49 200.7 224 50.4
Dinv37538 Davidia involucrata HOM05D007666 ORTHO05D009567 5.5e-49 199.1 267 46.1
Sed0007649 Sechium edule HOM05D007666 ORTHO05D009567 3.0e-47 193.4 218 53.7
Gohir.A09G190500 Gossypium hirsutum HOM05D007666 ORTHO05D009567 6.8e-47 192.2 215 47.9
TWI60G1340 Tripterygium wilfordii HOM05D007666 ORTHO05D009567 1.5e-46 191.0 344 41.3
MBI07_g38452_MAGBIO Magnolia biondii HOM05D007666 ORTHO05D009567 1.7e-45 187.6 375 37.9
Gorai.006G207700 Gossypium raimondii HOM05D007666 ORTHO05D009567 4.8e-45 186.0 327 37.6
Nitab4.5_0001231g0060 Nicotiana tabacum HOM05D007666 ORTHO05D009567 8.3e-45 185.3 206 51.0
Gohir.A02G101700 Gossypium hirsutum HOM05D007666 ORTHO05D009567 1.1e-44 184.9 218 46.8
Nitab4.5_0005537g0030 Nicotiana tabacum HOM05D007666 ORTHO05D009567 1.1e-44 184.9 206 50.5
Peaxi162Scf00074g00106 Petunia axillaris HOM05D007666 ORTHO05D009567 1.8e-44 184.1 206 51.5
Gohir.D09G185200 Gossypium hirsutum HOM05D007666 ORTHO05D009567 7.0e-44 182.2 329 37.4
PGSC0003DMG400012289 Solanum tuberosum HOM05D007666 ORTHO05D009567 1.3e-42 177.9 206 50.0
TAR636G3598 Trochodendron aralioides HOM05D007666 ORTHO05D009567 6.5e-42 175.6 222 46.8
MSTRG.25667 Avicennia marina HOM05D007666 ORTHO05D009567 8.5e-42 175.3 288 39.9
EL10Ac5g12908 Beta vulgaris HOM05D007666 ORTHO05D009567 3.2e-41 173.3 373 35.9
Sopen08g030510 Solanum pennellii HOM05D007666 ORTHO05D009567 5.5e-41 172.6 335 37.0
Ah.07g197340 Amaranthus hybridus HOM05D007666 ORTHO05D009567 9.5e-41 171.8 294 40.1
HanXRQChr06g0166511 Helianthus annuus HOM05D007666 ORTHO05D009567 1.0e-39 168.3 388 35.3
AUR62010832 Chenopodium quinoa HOM05D007666 ORTHO05D009567 2.3e-39 167.2 362 37.0
vmacro11431 Vaccinium macrocarpon HOM05D007666 ORTHO05D009567 6.8e-39 165.6 499 31.7
Lj2C168T16 Lonicera japonica HOM05D007666 ORTHO05D009567 3.4e-38 163.3 201 47.8
Migut.A00661 Erythranthe guttata HOM05D007666 ORTHO05D009567 3.7e-37 159.8 334 37.7
DCAR_005041 Daucus carota HOM05D007666 ORTHO05D009567 2.4e-36 157.1 196 46.9
Hund14226 Selenicereus undatus HOM05D007666 ORTHO05D009567 2.4e-36 157.1 250 41.2
PSO135G0060 Papaver somniferum HOM05D007666 ORTHO05D009567 4.1e-36 156.4 359 33.7
PSO384G2287 Papaver somniferum HOM05D007666 ORTHO05D009567 3.5e-35 153.3 375 33.1
ECA246G0366 Erigeron canadensis HOM05D007666 ORTHO05D009567 5.9e-35 152.5 354 34.7
Duzib205G0056 Durio zibethinus HOM05D007666 ORTHO05D009567 2.3e-34 150.6 221 41.6
SGA_v2.0_scaffold305G47963 Striga asiatica HOM05D007666 ORTHO05D009567 1.5e-33 147.9 316 36.4
Thhalv10023582m.g Eutrema salsugineum HOM05D007666 ORTHO05D009567 4.3e-33 146.4 259 40.9
CARHR046550 Cardamine hirsuta HOM05D007666 ORTHO05D009567 5.6e-33 146.0 241 41.9
ATR0188G013 Amborella trichopoda HOM05D007666 ORTHO05D009567 3.6e-32 143.3 347 35.2
AL2G10470 Arabidopsis lyrata HOM05D007666 ORTHO05D009567 3.6e-32 143.3 330 34.5
Cc08_g15990 Coffea canephora HOM05D007666 ORTHO05D009567 3.6e-32 143.3 219 43.8
THA.LOC104817649 Tarenaya hassleriana HOM05D007666 ORTHO05D009567 3.6e-32 143.3 397 34.0
Carub.0002s0039 Capsella rubella HOM05D007666 ORTHO05D009567 4.7e-32 142.9 282 37.2
COL.COLO4_10690 Corchorus olitorius HOM05D007666 ORTHO05D009567 4.7e-32 142.9 248 41.5
SalBow1G7426 Salvia bowleyana HOM05D007666 ORTHO05D009567 4.7e-32 142.9 301 35.5
AT1G64385 Arabidopsis thaliana HOM05D007666 ORTHO05D009567 6.8e-31 139.0 345 33.9
Lsat_1_v5_gn_3_10540 Lactuca sativa HOM05D007666 ORTHO05D009567 7.5e-30 135.6 401 32.2
C09p17230 Brassica napus HOM05D007666 ORTHO05D009567 1.3e-29 134.8 231 41.1
BolC9t54623H Brassica oleracea HOM05D007666 ORTHO05D009567 1.3e-29 134.8 231 41.1
SpUn0393_0010 Schrenkiella parvula HOM05D007666 ORTHO05D009567 2.9e-29 133.7 296 36.1
MD14G1127900 Malus domestica HOM05D007666 ORTHO05D009567 3.7e-29 133.3 182 46.7
BcaC04g22624 Brassica carinata HOM05D007666 ORTHO05D009567 6.4e-29 132.5 231 41.1
HPP92_005518 Vanilla planifolia HOM05D007666 ORTHO05D009567 1.1e-28 131.7 211 39.8
A09p14330 Brassica napus HOM05D007666 ORTHO05D009567 2.4e-28 130.6 241 39.4
FAN04G1782 Fragaria x ananassa HOM05D007666 ORTHO05D009567 1.1e-25 121.7 230 40.0
Actinidia04207 Actinidia chinensis HOM05D007666 ORTHO05D009567 1.5e-25 121.3 215 42.3
AUR62019830 Chenopodium quinoa HOM05D007666 ORTHO05D009567 1.9e-25 120.9 361 32.4
BcaB07g31505 Brassica carinata HOM05D007666 ORTHO05D009567 2.5e-25 120.6 336 34.8
BraA09t37080Z Brassica rapa HOM05D007666 ORTHO05D009567 2.5e-25 120.6 321 33.3
Nn3g19029 Nelumbo nucifera HOM05D007666 ORTHO05D009567 3.4e-22 110.2 150 44.0
Aa31LG2G1390 Aethionema arabicum HOM05D007666 ORTHO05D009567 7.5e-22 109.0 216 37.5
Zm00001eb344230 Zea mays HOM05D007666 ORTHO05D009567 1.3e-21 108.2 277 33.9
Atru.chr2.3612 Acer truncatum HOM05D007666 ORTHO05D009567 5.4e-20 102.8 143 45.5
SEGI_11810 Sequoiadendron giganteum HOM05D003589 ORTHO05D005170 2.8e-16 90.5 193 34.2
Dinv16976 Davidia involucrata HOM05D003589 ORTHO05D005170 1.1e-15 88.6 220 30.5
Aqoxy4G02429 Aquilegia oxysepala HOM05D003589 ORTHO05D005170 8.9e-15 85.5 213 31.9
Duzib151G0965 Durio zibethinus HOM05D003589 ORTHO05D005170 3.4e-14 83.6 213 31.5
PSO170G6362 Papaver somniferum HOM05D003589 ORTHO05D005170 4.4e-14 83.2 247 31.2
RcHm_v2.0_Chr3g0460451 Rosa chinensis HOM05D003589 ORTHO05D005170 8.3e-13 79.0 216 30.1
ClCG10G022760 Citrullus lanatus HOM05D003589 ORTHO05D005170 1.4e-12 78.2 218 31.7
FAN05G0190 Fragaria x ananassa HOM05D003589 ORTHO05D005170 3.2e-12 77.0 246 28.9
FAN05G1200 Fragaria x ananassa HOM05D003589 ORTHO05D005170 3.2e-12 77.0 246 28.9
FAN05G4521 Fragaria x ananassa HOM05D003589 ORTHO05D005170 3.2e-12 77.0 246 28.9
Ciclev10011425m.g Citrus clementina HOM05D003589 ORTHO05D005170 1.2e-11 75.1 218 28.9
FAN09G1607 Fragaria x ananassa HOM05D003589 ORTHO05D005170 2.1e-11 74.3 227 27.8
TAR369G0333 Trochodendron aralioides HOM05D003589 ORTHO05D005170 4.6e-11 73.2 226 27.0
Dinv25345 Davidia involucrata HOM05D003589 ORTHO05D005170 6.0e-11 72.8 377 24.4
Solyc08g082240.1 Solanum lycopersicum HOM05D007666 ORTHO05D009567 1.0e-10 72.0 82 56.1
FAN14G2282 Fragaria x ananassa HOM05D003589 ORTHO05D005170 1.3e-10 71.6 217 27.2
ATR1127G101 Amborella trichopoda HOM05D003589 ORTHO05D005170 2.3e-10 70.9 205 29.3
Psat3g118720 Pisum sativum HOM05D003589 ORTHO05D005170 3.0e-10 70.5 223 28.3
Nitab4.5_0004433g0040 Nicotiana tabacum HOM05D003589 ORTHO05D005170 8.6e-10 68.9 208 28.8
FvH4_6g09850 Fragaria vesca HOM05D003589 ORTHO05D005170 2.5e-09 67.4 217 27.6
PGSC0003DMG400026790 Solanum tuberosum HOM05D003589 ORTHO05D005170 4.3e-09 66.6 215 29.8
EL10Ac7g17103 Beta vulgaris HOM05D003589 ORTHO05D005170 5.6e-09 66.2 218 29.4
GSVIVG01030180001 Vitis vinifera HOM05D003589 ORTHO05D005170 7.3e-09 65.9 203 28.1
Solyc09g015530.3 Solanum lycopersicum HOM05D003589 ORTHO05D005170 1.2e-08 65.1 210 30.5
vmacro08941 Vaccinium macrocarpon HOM05D003589 ORTHO05D005170 1.6e-08 64.7 216 30.1
Ah.15g090010 Amaranthus hybridus HOM05D003589 ORTHO05D005170 2.8e-08 63.9 223 30.0
Gohir.A02G003200 Gossypium hirsutum HOM05D003589 ORTHO05D005170 2.8e-08 63.9 286 25.2
Sopen09g009460 Solanum pennellii HOM05D003589 ORTHO05D005170 3.6e-08 63.5 215 29.3
MELO3C020009.2 Cucumis melo HOM05D003589 ORTHO05D005170 4.7e-08 63.2 235 28.1
Gohir.D02G003600 Gossypium hirsutum HOM05D003589 ORTHO05D005170 4.7e-08 63.2 249 25.7
PGR031G3776 Punica granatum HOM05D003589 ORTHO05D005170 4.7e-08 63.2 217 27.6
COL.COLO4_10689 Corchorus olitorius HOM05D007666 ORTHO05D009567 1.1e-07 62.0 108 33.3
Gorai.005G004100 Gossypium raimondii HOM05D003589 ORTHO05D005170 1.4e-07 61.6 358 23.7
Lalb_Chr01g0023761 Lupinus albus HOM05D003589 ORTHO05D005170 1.4e-07 61.6 212 29.2
Eucgr.A00727 Eucalyptus grandis HOM05D003589 ORTHO05D005170 1.8e-07 61.2 214 26.6
CsaV3_6G002320 Cucumis sativus L. HOM05D003589 ORTHO05D005170 2.3e-07 60.8 180 26.7
VMungo1383G2329 Vigna mungo HOM05D003589 ORTHO05D005170 2.3e-07 60.8 245 28.2
Mapoly0014s0172 Marchantia polymorpha HOM05D029953 ORTHO05D009567 5.2e-07 59.7 361 26.6
ClCG11G005660 Citrullus lanatus HOM05D003589 ORTHO05D005170 8.9e-07 58.9 180 26.7
Potri.019G058400 Populus trichocarpa HOM05D003589 ORTHO05D005170 2.6e-06 57.4 199 27.6
Prupe.6G293800 Prunus persica HOM05D003589 ORTHO05D005170 7.6e-06 55.8 208 26.4


User provided reference genes

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