Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G121100 Carya illinoinensis HOM05D007727 ORTHO05D009078 3.3e-77 291.6 144 100.0
QL02p030389 Quercus lobata HOM05D007727 ORTHO05D009078 1.7e-33 146.4 153 57.5
QL02p030408 Quercus lobata HOM05D007727 ORTHO05D009078 4.3e-32 141.7 145 57.2
QL02p030384 Quercus lobata HOM05D007727 ORTHO05D009078 1.2e-31 140.2 153 54.2
QL02p030393 Quercus lobata HOM05D007727 ORTHO05D009078 1.2e-31 140.2 142 58.5
CiPaw.12G082600 Carya illinoinensis HOM05D007727 ORTHO05D009078 8.1e-31 137.5 160 56.2
CiPaw.12G082800 Carya illinoinensis HOM05D007727 ORTHO05D009078 1.4e-27 126.7 160 53.8
Haze_09065 Corylus avellana HOM05D007727 ORTHO05D009078 6.6e-25 117.9 145 51.7
Haze_09064 Corylus avellana HOM05D007727 ORTHO05D009078 7.3e-24 114.4 151 49.7
Cfa012003 Carpinus fangiana HOM05D007727 ORTHO05D009078 1.1e-22 110.5 150 48.0
Cfa012008 Carpinus fangiana HOM05D007727 ORTHO05D009078 1.1e-22 110.5 150 48.0
Cfa012009 Carpinus fangiana HOM05D007727 ORTHO05D009078 1.5e-21 106.7 129 52.7
Potri.003G140200 Populus trichocarpa HOM05D007727 ORTHO05D009078 1.1e-19 100.5 110 51.8
Potri.003G140233 Populus trichocarpa HOM05D007727 ORTHO05D009078 1.1e-19 100.5 110 51.8
Potri.003G140266 Populus trichocarpa HOM05D007727 ORTHO05D009078 1.1e-19 100.5 110 51.8
Manes.02G009800 Manihot esculenta HOM05D007727 ORTHO05D009078 5.4e-19 98.2 151 42.4
Duzib205G0888 Durio zibethinus HOM05D007727 ORTHO05D009078 1.6e-18 96.7 142 44.4
Prupe.5G120300 Prunus persica HOM05D007727 ORTHO05D009078 1.6e-18 96.7 133 47.4
Potri.004G151000 Populus trichocarpa HOM05D007727 ORTHO05D009078 3.5e-18 95.5 110 48.2
Thecc.03G298300 Theobroma cacao HOM05D007727 ORTHO05D009078 3.5e-18 95.5 125 46.4
COL.COLO4_10705 Corchorus olitorius HOM05D007727 ORTHO05D009078 8.7e-17 90.9 125 44.8
Potri.001G091400 Populus trichocarpa HOM05D007727 ORTHO05D009078 1.1e-16 90.5 118 47.5
Gorai.004G133300 Gossypium raimondii HOM05D007727 ORTHO05D009078 1.9e-16 89.7 132 43.9
FAN13G2104 Fragaria x ananassa HOM05D007727 ORTHO05D009078 4.3e-16 88.6 144 45.1
FAN13G3265 Fragaria x ananassa HOM05D007727 ORTHO05D009078 4.3e-16 88.6 144 45.1
Gohir.D08G130400 Gossypium hirsutum HOM05D007727 ORTHO05D009078 7.3e-16 87.8 150 42.0
Hma1.2p1_1746F.1_g300420 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 7.3e-16 87.8 123 46.3
Sabra01G0067800 Salix brachista HOM05D007727 ORTHO05D009078 9.6e-16 87.4 110 49.1
Sabra01G0067700 Salix brachista HOM05D007727 ORTHO05D009078 1.6e-15 86.7 110 49.1
CSS0019090 Camellia sinensis var. sinensis HOM05D007727 ORTHO05D009078 2.8e-15 85.9 144 41.0
Glyma.05G216900 Glycine max HOM05D007727 ORTHO05D009078 2.8e-15 85.9 134 40.3
Dinv38830 Davidia involucrata HOM05D007727 ORTHO05D009078 3.6e-15 85.5 108 47.2
Rhsim02G0243900 Rhododendron simsii HOM05D007727 ORTHO05D009078 3.6e-15 85.5 128 42.2
Hma1.2p1_1461F.1_g285070 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 4.8e-15 85.1 121 46.3
FvH4_5g04620 Fragaria vesca HOM05D007727 ORTHO05D009078 6.2e-15 84.7 144 44.4
FAN18G4426 Fragaria x ananassa HOM05D007727 ORTHO05D009078 6.2e-15 84.7 144 44.4
FAN08G2749 Fragaria x ananassa HOM05D007727 ORTHO05D009078 1.1e-14 84.0 144 43.8
FAN18G0179 Fragaria x ananassa HOM05D007727 ORTHO05D009078 1.8e-14 83.2 144 44.4
Gohir.A02G100000 Gossypium hirsutum HOM05D007727 ORTHO05D009078 1.8e-14 83.2 69 63.8
Hma1.2p1_1461F.1_g285060 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 1.8e-14 83.2 67 59.7
Hma1.2p1_2808F.1_g328866 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 1.8e-14 83.2 67 59.7
CSS0050195 Camellia sinensis var. sinensis HOM05D007727 ORTHO05D009078 2.4e-14 82.8 115 46.1
Gohir.D03G083800 Gossypium hirsutum HOM05D007727 ORTHO05D009078 2.4e-14 82.8 69 63.8
Gorai.003G078900 Gossypium raimondii HOM05D007727 ORTHO05D009078 2.4e-14 82.8 69 63.8
Rhsim02G0243800 Rhododendron simsii HOM05D007727 ORTHO05D009078 2.4e-14 82.8 117 44.4
Rhsim02G0244000 Rhododendron simsii HOM05D007727 ORTHO05D009078 3.1e-14 82.4 117 44.4
FAN04G2059 Fragaria x ananassa HOM05D007727 ORTHO05D009078 4.0e-14 82.0 122 45.9
VMungo1215G2373 Vigna mungo HOM05D007727 ORTHO05D009078 4.0e-14 82.0 101 48.5
Glyma.08G023200 Glycine max HOM05D007727 ORTHO05D009078 6.9e-14 81.3 119 47.1
Glyma.01G225500 Glycine max HOM05D007727 ORTHO05D009078 1.2e-13 80.5 111 46.8
Rhsim02G0243700 Rhododendron simsii HOM05D007727 ORTHO05D009078 1.2e-13 80.5 115 42.6
LjContig00312_ERROPOS870357g0016151 Lotus japonicus HOM05D007727 ORTHO05D009078 3.4e-13 79.0 100 46.0
Glyma.11G017500 Glycine max HOM05D007727 ORTHO05D009078 5.8e-13 78.2 108 46.3
Phvul.002G164400 Phaseolus vulgaris HOM05D007727 ORTHO05D009078 7.6e-13 77.8 106 46.2
Glyma.08G022800 Glycine max HOM05D007727 ORTHO05D009078 1.3e-12 77.0 138 38.4
Gohir.A08G103450 Gossypium hirsutum HOM05D007727 ORTHO05D009078 1.3e-12 77.0 115 42.6
Eucgr.D01742 Eucalyptus grandis HOM05D007727 ORTHO05D009078 1.7e-12 76.6 67 62.7
Oeu031673.1 Olea europaea HOM05D007727 ORTHO05D009078 2.9e-12 75.9 104 47.1
CANSAT21G1217 Cannabis sativa HOM05D007727 ORTHO05D009078 3.8e-12 75.5 55 65.5
Oeu031672.1 Olea europaea HOM05D007727 ORTHO05D009078 4.9e-12 75.1 103 43.7
Eucgr.D01747 Eucalyptus grandis HOM05D007727 ORTHO05D009078 1.1e-11 73.9 120 46.7
Ciclev10022327m.g Citrus clementina HOM05D007727 ORTHO05D009078 2.4e-11 72.8 65 58.5
Eucgr.D01744 Eucalyptus grandis HOM05D007727 ORTHO05D009078 4.2e-11 72.0 96 46.9
Glyma.05G217200 Glycine max HOM05D007727 ORTHO05D009078 4.2e-11 72.0 113 45.1
Rhsim02G0243600 Rhododendron simsii HOM05D007727 ORTHO05D009078 4.2e-11 72.0 115 41.7
Lj4g0015473 Lotus japonicus HOM05D007727 ORTHO05D009078 5.4e-11 71.6 113 40.7
MSTRG.25675 Avicennia marina HOM05D007727 ORTHO05D009078 1.6e-10 70.1 114 42.1
ECA240G1351 Erigeron canadensis HOM05D007727 ORTHO05D009078 6.0e-10 68.2 77 50.6
Lj4g0008549 Lotus japonicus HOM05D007727 ORTHO05D009078 1.8e-09 66.6 138 37.7
Sed0000706 Sechium edule HOM05D007727 ORTHO05D009078 1.8e-09 66.6 102 38.2
PGSC0003DMG400012144 Solanum tuberosum HOM05D011491 ORTHO05D009078 2.3e-09 66.2 132 35.6
Medtr5g009290 Medicago truncatula HOM05D007727 ORTHO05D009078 3.9e-09 65.5 115 36.5
PGSC0003DMG400012146 Solanum tuberosum HOM05D011491 ORTHO05D009078 3.9e-09 65.5 133 39.1
Lalb_Chr05g0224131 Lupinus albus HOM05D007727 ORTHO05D009078 6.7e-09 64.7 109 40.4
MSTRG.25674 Avicennia marina HOM05D007727 ORTHO05D009078 1.1e-08 63.9 95 43.2
MELO3C016295.2 Cucumis melo HOM05D007727 ORTHO05D009078 1.5e-08 63.5 106 39.6
TAR374G1599 Trochodendron aralioides HOM05D026466 ORTHO05D009078 1.9e-08 63.2 159 33.3
TPR.G11121 Trifolium pratense HOM05D007727 ORTHO05D009078 3.3e-08 62.4 136 33.1
ClCG07G011610 Citrullus lanatus HOM05D007727 ORTHO05D009078 4.3e-08 62.0 92 41.3
Phvul.002G298200 Phaseolus vulgaris HOM05D007727 ORTHO05D009078 7.4e-08 61.2 104 35.6
Phvul.002G298600 Phaseolus vulgaris HOM05D007727 ORTHO05D009078 7.4e-08 61.2 104 35.6
TPR.G25603 Trifolium pratense HOM05D007727 ORTHO05D009078 1.3e-07 60.5 148 33.1
AUR62010842 Chenopodium quinoa HOM05D007727 ORTHO05D009078 1.6e-07 60.1 52 55.8
CsaV3_4G006600 Cucumis sativus L. HOM05D007727 ORTHO05D009078 1.6e-07 60.1 105 40.0
Nitab4.5_0001210g0030 Nicotiana tabacum HOM05D011491 ORTHO05D009078 1.6e-07 60.1 107 36.4
TAR374G1217 Trochodendron aralioides HOM05D026466 ORTHO05D009078 2.1e-07 59.7 161 31.7
PGSC0003DMG400012147 Solanum tuberosum HOM05D011491 ORTHO05D009078 2.8e-07 59.3 66 50.0
AUR62019842 Chenopodium quinoa HOM05D007727 ORTHO05D009078 6.2e-07 58.2 45 57.8
Aa31LG6G7130 Aethionema arabicum HOM05D009622 ORTHO05D011757 1.1e-06 57.4 93 36.6
TPR.G3425 Trifolium pratense HOM05D007727 ORTHO05D009078 1.1e-06 57.4 50 50.0
Solyc08g082380.1 Solanum lycopersicum HOM05D011491 ORTHO05D009078 1.4e-06 57.0 113 34.5
Sopen08g030640 Solanum pennellii HOM05D011491 ORTHO05D009078 1.4e-06 57.0 46 56.5
TPR.G3415 Trifolium pratense HOM05D007727 ORTHO05D009078 1.4e-06 57.0 50 52.0
Psat2g185360 Pisum sativum HOM05D007727 ORTHO05D009078 1.8e-06 56.6 92 39.1
TPR.G3394 Trifolium pratense HOM05D007727 ORTHO05D009078 1.8e-06 56.6 50 50.0
VMungo0251G2989 Vigna mungo HOM05D007727 ORTHO05D009078 2.4e-06 56.2 102 38.2
Medtr8g099485 Medicago truncatula HOM05D007727 ORTHO05D009078 4.0e-06 55.5 49 55.1
Peaxi162Scf00074g00091 Petunia axillaris HOM05D011491 ORTHO05D009078 4.0e-06 55.5 106 39.6
Peaxi162Scf00074g00092 Petunia axillaris HOM05D011491 ORTHO05D009078 5.3e-06 55.1 106 34.9
Nitab4.5_0002782g0050 Nicotiana tabacum HOM05D011491 ORTHO05D009078 6.9e-06 54.7 46 52.2


User provided reference genes

Program Settings