Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G110000 Carya illinoinensis HOM05D008613 ORTHO05D006961 1.2e-29 132.9 88 100.0
Gohir.A02G099100 Gossypium hirsutum HOM05D008613 ORTHO05D006961 4.6e-13 77.8 87 47.1
Gohir.D03G084800 Gossypium hirsutum HOM05D008613 ORTHO05D006961 4.6e-13 77.8 87 47.1
Duzib205G1760 Durio zibethinus HOM05D008613 ORTHO05D006961 1.0e-12 76.6 88 50.0
Gorai.003G077900 Gossypium raimondii HOM05D008613 ORTHO05D006961 1.0e-12 76.6 87 46.0
Thecc.03G217500 Theobroma cacao HOM05D008613 ORTHO05D006961 3.0e-12 75.1 88 47.7
Manes.01G055000 Manihot esculenta HOM05D008613 ORTHO05D006961 6.7e-12 73.9 88 44.3
Potri.001G449800 Populus trichocarpa HOM05D008613 ORTHO05D006961 8.8e-12 73.6 90 44.4
Potri.001G449900 Populus trichocarpa HOM05D008613 ORTHO05D006961 8.8e-12 73.6 90 44.4
Potri.001G450000 Populus trichocarpa HOM05D008613 ORTHO05D006961 8.8e-12 73.6 90 44.4
Manes.01G055100 Manihot esculenta HOM05D008613 ORTHO05D006961 3.3e-11 71.6 88 44.3
Sabra16G0303600 Salix brachista HOM05D008613 ORTHO05D006961 7.4e-11 70.5 92 45.7
Sabra16G0303700 Salix brachista HOM05D008613 ORTHO05D006961 7.4e-11 70.5 91 44.0
Sabra16G0303800 Salix brachista HOM05D008613 ORTHO05D006961 7.4e-11 70.5 92 45.7
QL02p027286 Quercus lobata HOM05D008613 ORTHO05D006961 9.7e-11 70.1 100 42.0
Gohir.A08G109100 Gossypium hirsutum HOM05D008613 ORTHO05D006961 1.3e-10 69.7 88 48.9
Gohir.D08G121900 Gossypium hirsutum HOM05D008613 ORTHO05D006961 1.3e-10 69.7 88 48.9
Sabra16G0303500 Salix brachista HOM05D008613 ORTHO05D006961 2.2e-10 68.9 92 44.6
Cpa.g.sc37.99 Carica papaya HOM05D008613 ORTHO05D006961 2.8e-10 68.6 91 52.7
Gorai.004G128500 Gossypium raimondii HOM05D008613 ORTHO05D006961 2.8e-10 68.6 88 48.9
Sabra16G0303900 Salix brachista HOM05D008613 ORTHO05D006961 2.8e-10 68.6 93 44.1
TWI15G0337 Tripterygium wilfordii HOM05D008613 ORTHO05D006961 3.7e-10 68.2 88 43.2
Atru.chr9.1866 Acer truncatum HOM05D008613 ORTHO05D006961 6.3e-10 67.4 88 47.7
Sabra15G0003300 Salix brachista HOM05D008837 ORTHO05D006961 1.1e-09 66.6 92 39.1
COL.COLO4_10830 Corchorus olitorius HOM05D008613 ORTHO05D006961 1.4e-09 66.2 89 59.6
THA.LOC104815392 Tarenaya hassleriana HOM05D008703 ORTHO05D006961 1.8e-09 65.9 85 42.4
Haze_09201 Corylus avellana HOM05D019613 ORTHO05D006961 2.4e-09 65.5 87 46.0
vmacro11487 Vaccinium macrocarpon HOM05D008613 ORTHO05D006961 5.3e-09 64.3 97 43.3
Aa31LG6G7520 Aethionema arabicum HOM05D008703 ORTHO05D006961 1.2e-08 63.2 85 40.0
Prupe.5G133100 Prunus persica HOM05D008613 ORTHO05D006961 1.2e-08 63.2 88 44.3
Rhsim02G0253700 Rhododendron simsii HOM05D008613 ORTHO05D006961 2.0e-08 62.4 92 42.4
CSS0022315 Camellia sinensis var. sinensis HOM05D008613 ORTHO05D006961 2.6e-08 62.0 86 43.0
CSS0023145 Camellia sinensis var. sinensis HOM05D008613 ORTHO05D006961 2.6e-08 62.0 86 43.0
Potri.015G004800 Populus trichocarpa HOM05D008837 ORTHO05D011237 4.5e-08 61.2 92 39.1
Carub.0001s3124 Capsella rubella HOM05D008703 ORTHO05D006961 5.9e-08 60.8 85 43.5
FAN04G2016 Fragaria x ananassa HOM05D008613 ORTHO05D006961 5.9e-08 60.8 85 43.5
FAN08G0050 Fragaria x ananassa HOM05D008613 ORTHO05D006961 5.9e-08 60.8 85 43.5
FvH4_5g10560 Fragaria vesca HOM05D008613 ORTHO05D006961 1.0e-07 60.1 85 43.5
FAN18G1327 Fragaria x ananassa HOM05D008613 ORTHO05D006961 1.0e-07 60.1 85 43.5
TAR629G3181 Trochodendron aralioides HOM05D008613 ORTHO05D006961 1.3e-07 59.7 89 40.4
Potri.012G021602 Populus trichocarpa HOM05D008837 ORTHO05D006961 1.7e-07 59.3 94 38.3
AL1G47210 Arabidopsis lyrata HOM05D008703 ORTHO05D006961 2.9e-07 58.5 85 41.2
Nn3g18877 Nelumbo nucifera HOM05D031625 ORTHO05D006961 2.9e-07 58.5 93 40.9
Nn3g18879 Nelumbo nucifera HOM05D031625 ORTHO05D006961 2.9e-07 58.5 93 40.9
Hma1.2p1_0415F.1_g148160 Hydrangea macrophylla HOM05D008837 ORTHO05D006961 3.8e-07 58.2 90 38.9
Potri.011G151600 Populus trichocarpa HOM05D008613 ORTHO05D006961 5.0e-07 57.8 89 60.7
Atru.chr12.2412 Acer truncatum HOM05D008837 ORTHO05D011237 6.5e-07 57.4 88 42.0
Cfa011897 Carpinus fangiana HOM05D019613 ORTHO05D006961 6.5e-07 57.4 87 43.7
Manes.05G197800 Manihot esculenta HOM05D008837 ORTHO05D011237 6.5e-07 57.4 88 38.6
RcHm_v2.0_Chr7g0187591 Rosa chinensis HOM05D008613 ORTHO05D006961 6.5e-07 57.4 87 46.0
AT1G32928 Arabidopsis thaliana HOM05D008703 ORTHO05D006961 1.4e-06 56.2 85 40.0
AT1G32920 Arabidopsis thaliana HOM05D008703 ORTHO05D006961 2.5e-06 55.5 85 37.6
Eucgr.A01407 Eucalyptus grandis HOM05D008837 ORTHO05D011237 2.5e-06 55.5 91 37.4
Oeu061026.1 Olea europaea HOM05D008837 ORTHO05D006961 3.2e-06 55.1 90 40.0
Eucgr.A01409 Eucalyptus grandis HOM05D008837 ORTHO05D011237 4.2e-06 54.7 91 37.4
Rhsim03G0215000 Rhododendron simsii HOM05D000001 ORTHO05D000003 9.4e-06 53.5 97 38.1


User provided reference genes

Program Settings