Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G102500 Carya illinoinensis HOM05D007523 ORTHO05D009520 7.5e-87 323.9 178 100.0
QL12p000900 Quercus lobata HOM05D007523 ORTHO05D009520 1.4e-53 213.4 175 72.6
Haze_08076 Corylus avellana HOM05D007523 ORTHO05D009520 1.9e-50 203.0 171 72.5
CSS0003197 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 4.9e-46 188.3 176 67.0
Manes.17G008000 Manihot esculenta HOM05D007523 ORTHO05D009520 8.4e-46 187.6 176 65.9
Potri.001G132400 Populus trichocarpa HOM05D007523 ORTHO05D009520 1.4e-45 186.8 176 64.8
CSS0001694 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 2.4e-45 186.0 171 67.3
Sabra01G0102200 Salix brachista HOM05D007523 ORTHO05D009520 4.2e-45 185.3 174 64.9
Dinv28021 Davidia involucrata HOM05D007523 ORTHO05D009520 4.6e-44 181.8 176 66.5
GSVIVG01026296001 Vitis vinifera HOM05D007523 ORTHO05D009520 4.6e-44 181.8 176 67.0
TAR629G3055 Trochodendron aralioides HOM05D007523 ORTHO05D009520 1.3e-41 173.7 176 61.9
Ciclev10002679m.g Citrus clementina HOM05D007523 ORTHO05D009520 1.4e-40 170.2 177 63.3
vmacro00070 Vaccinium macrocarpon HOM05D007523 ORTHO05D009520 1.8e-40 169.9 174 57.5
Atru.chr6.1496 Acer truncatum HOM05D007523 ORTHO05D009520 3.1e-40 169.1 173 63.6
ClCG07G002350 Citrullus lanatus HOM05D007523 ORTHO05D009520 3.4e-39 165.6 175 61.7
Prupe.5G021500 Prunus persica HOM05D007523 ORTHO05D009520 1.7e-38 163.3 172 63.4
Actinidia04633 Actinidia chinensis HOM05D007523 ORTHO05D009520 2.2e-38 162.9 176 55.7
Lj4g0001215 Lotus japonicus HOM05D007523 ORTHO05D009520 3.8e-38 162.2 172 62.2
Nn1g02124 Nelumbo nucifera HOM05D007523 ORTHO05D009520 1.4e-37 160.2 173 59.0
Eucgr.D02602 Eucalyptus grandis HOM05D007523 ORTHO05D009520 2.5e-37 159.5 175 61.1
TWI34G1559 Tripterygium wilfordii HOM05D007523 ORTHO05D009520 3.2e-37 159.1 177 60.5
Thecc.02G365300 Theobroma cacao HOM05D007523 ORTHO05D009520 5.5e-37 158.3 176 60.2
Lalb_Chr16g0392051 Lupinus albus HOM05D007523 ORTHO05D009520 7.1e-37 157.9 173 57.2
CANSAT21G1314 Cannabis sativa HOM05D007523 ORTHO05D009520 2.1e-36 156.4 176 55.7
MD06G1014600 Malus domestica HOM05D007523 ORTHO05D009520 2.1e-36 156.4 178 60.7
Cc08_g04400 Coffea canephora HOM05D007523 ORTHO05D009520 6.0e-36 154.8 176 50.6
CsaV3_3G030330 Cucumis sativus L. HOM05D007523 ORTHO05D009520 7.9e-36 154.5 175 57.1
Sed0002333 Sechium edule HOM05D007523 ORTHO05D009520 1.0e-35 154.1 176 58.5
PGR031G0795 Punica granatum HOM05D007523 ORTHO05D009520 1.3e-35 153.7 173 60.7
Oeu017333.1 Olea europaea HOM05D007523 ORTHO05D009520 4.3e-34 148.7 133 68.4
Medtr8g071180 Medicago truncatula HOM05D007523 ORTHO05D009520 1.6e-33 146.7 173 56.1
Rhsim11G0026000 Rhododendron simsii HOM05D007523 ORTHO05D009520 4.8e-33 145.2 150 58.7
RcHm_v2.0_Chr7g0213271 Rosa chinensis HOM05D007523 ORTHO05D009520 4.8e-33 145.2 176 57.4
Ca_22486_v3 Cicer arietinum L. HOM05D007523 ORTHO05D009520 4.1e-32 142.1 174 56.3
Duzib248G0934 Durio zibethinus HOM05D007523 ORTHO05D009520 9.0e-32 141.0 175 54.9
TPR.G31317 Trifolium pratense HOM05D007523 ORTHO05D009520 9.0e-32 141.0 173 55.5
Peaxi162Scf00876g00434 Petunia axillaris HOM05D007523 ORTHO05D009520 1.2e-31 140.6 156 59.0
Thhalv10026426m.g Eutrema salsugineum HOM05D007523 ORTHO05D009520 1.5e-31 140.2 173 54.3
Nn3g19239 Nelumbo nucifera HOM05D007523 ORTHO05D009520 1.5e-31 140.2 176 54.5
PSO675G0851 Papaver somniferum HOM05D007523 ORTHO05D009520 2.0e-31 139.8 173 54.9
CARHR225970 Cardamine hirsuta HOM05D007523 ORTHO05D009520 4.5e-31 138.7 177 54.2
THA.LOC104811020 Tarenaya hassleriana HOM05D007523 ORTHO05D009520 5.9e-31 138.3 143 62.9
FvH4_5g23880 Fragaria vesca HOM05D007523 ORTHO05D009520 1.0e-30 137.5 175 55.4
FAN18G0623 Fragaria x ananassa HOM05D007523 ORTHO05D009520 1.0e-30 137.5 175 55.4
FAN18G3486 Fragaria x ananassa HOM05D007523 ORTHO05D009520 1.0e-30 137.5 175 55.4
AT4G19070 Arabidopsis thaliana HOM05D007523 ORTHO05D009520 1.3e-30 137.1 177 52.5
Psat4g110520 Pisum sativum HOM05D007523 ORTHO05D009520 1.7e-30 136.7 171 55.6
BolC7t45523H Brassica oleracea HOM05D007523 ORTHO05D009520 2.9e-30 136.0 177 55.9
FAN04G1224 Fragaria x ananassa HOM05D007523 ORTHO05D009520 2.9e-30 136.0 168 57.1
Carub.0007s2207 Capsella rubella HOM05D007523 ORTHO05D009520 3.8e-30 135.6 177 52.5
arahy.Tifrunner.gnm1.ann1.7DC73F Arachis hypogaea HOM05D007523 ORTHO05D009520 8.5e-30 134.4 174 54.0
MBI18_g28211_MAGBIO Magnolia biondii HOM05D007523 ORTHO05D009520 8.5e-30 134.4 174 56.3
arahy.Tifrunner.gnm1.ann1.19GUIE Arachis hypogaea HOM05D007523 ORTHO05D009520 1.1e-29 134.0 174 54.0
Sc22g0001970 Simmondsia chinensis HOM05D007523 ORTHO05D009520 1.1e-29 134.0 177 53.1
Aqoxy4G00046 Aquilegia oxysepala HOM05D007523 ORTHO05D009520 1.4e-29 133.7 142 64.8
AL7G35030 Arabidopsis lyrata HOM05D007523 ORTHO05D009520 2.5e-29 132.9 177 52.0
ATR1098G100 Amborella trichopoda HOM05D007523 ORTHO05D009520 4.2e-29 132.1 117 71.8
MSTRG.1775 Avicennia marina HOM05D007523 ORTHO05D009520 5.5e-29 131.7 176 50.0
BcaNung03083 Brassica carinata HOM05D007523 ORTHO05D009520 7.2e-29 131.3 174 55.7
Aa31LG6G1770 Aethionema arabicum HOM05D007523 ORTHO05D005023 9.3e-29 131.0 142 58.5
Phvul.003G279400 Phaseolus vulgaris HOM05D007523 ORTHO05D009520 1.2e-28 130.6 173 52.6
HanXRQChr03g0082201 Helianthus annuus HOM05D007523 ORTHO05D009520 2.1e-28 129.8 149 61.1
Sp7g17790 Schrenkiella parvula HOM05D007523 ORTHO05D005023 2.1e-28 129.8 142 59.2
PSO675G0835 Papaver somniferum HOM05D007523 ORTHO05D009520 3.6e-28 129.0 130 64.6
C07p50210 Brassica napus HOM05D000137 ORTHO05D002305 4.6e-28 128.6 142 59.2
Migut.E01344 Erythranthe guttata HOM05D007523 ORTHO05D009520 7.9e-28 127.9 168 50.6
A03p51710 Brassica napus HOM05D000137 ORTHO05D002305 1.0e-27 127.5 133 64.7
BraA03t14258Z Brassica rapa HOM05D000452 ORTHO05D000647 1.0e-27 127.5 143 62.2
ECA240G1522 Erigeron canadensis HOM05D007523 ORTHO05D009520 1.8e-27 126.7 152 58.6
SalBow8G2402 Salvia bowleyana HOM05D007523 ORTHO05D009520 2.3e-27 126.3 149 57.7
Gohir.A12G173966 Gossypium hirsutum HOM05D007523 ORTHO05D009520 3.0e-27 125.9 176 52.8
Gorai.008G189000 Gossypium raimondii HOM05D007523 ORTHO05D009520 3.0e-27 125.9 176 52.8
VMungo0251G0133 Vigna mungo HOM05D007523 ORTHO05D009520 6.7e-27 124.8 172 51.7
SGA_v2.0_scaffold96G29060 Striga asiatica HOM05D007523 ORTHO05D009520 8.8e-27 124.4 168 51.2
Nitab4.5_0000943g0130 Nicotiana tabacum HOM05D007523 ORTHO05D009520 1.9e-26 123.2 156 57.1
BcaC06g30615 Brassica carinata HOM05D007523 ORTHO05D009520 2.5e-26 122.9 179 52.0
Cpa.g.sc355.1 Carica papaya HOM05D007523 ORTHO05D009520 2.5e-26 122.9 116 72.4
Migut.A00547 Erythranthe guttata HOM05D007523 ORTHO05D009520 3.3e-26 122.5 178 46.6
Gohir.D12G176600 Gossypium hirsutum HOM05D007523 ORTHO05D009520 3.3e-26 122.5 176 54.0
Glyma.16G104300 Glycine max HOM05D007523 ORTHO05D009520 4.3e-26 122.1 173 50.9
CAN.G947.41 Capsicum annuum HOM05D007523 ORTHO05D009520 5.7e-26 121.7 156 54.5
Nitab4.5_0006741g0030 Nicotiana tabacum HOM05D007523 ORTHO05D009520 1.3e-25 120.6 153 57.5
CDE05G0732 Ceratophyllum demersum HOM05D007523 ORTHO05D009520 4.8e-25 118.6 174 50.6
PGSC0003DMG400029292 Solanum tuberosum HOM05D007523 ORTHO05D009520 4.1e-24 115.5 151 54.3
Solyc12g096090.2 Solanum lycopersicum HOM05D007523 ORTHO05D009520 5.3e-24 115.2 154 53.9
Sopen12g031980 Solanum pennellii HOM05D007523 ORTHO05D009520 5.3e-24 115.2 154 53.9
EL10Ac5g11951 Beta vulgaris HOM05D007523 ORTHO05D009520 4.2e-21 105.5 87 79.3
Ah.12g055890 Amaranthus hybridus HOM05D002287 ORTHO05D002588 1.2e-20 104.0 152 52.6
Peaxi162Scf00972g00043 Petunia axillaris HOM05D007523 ORTHO05D009520 2.1e-20 103.2 102 68.6
Mapoly0024s0063 Marchantia polymorpha HOM05D007523 ORTHO05D009520 1.8e-19 100.1 120 57.5
SalBow4G0950 Salvia bowleyana HOM05D007523 ORTHO05D009520 5.1e-19 98.6 78 80.8
HPP92_012195 Vanilla planifolia HOM05D007523 ORTHO05D009520 5.1e-19 98.6 122 60.7
COL.COLO4_11248 Corchorus olitorius HOM05D007523 ORTHO05D009520 2.0e-18 96.7 104 67.3
AUR62027336 Chenopodium quinoa HOM05D007523 ORTHO05D009520 5.7e-18 95.1 87 77.0
AUR62007395 Chenopodium quinoa HOM05D002287 ORTHO05D009520 9.7e-18 94.4 85 74.1
unitig_0.g2217 Utricularia gibba HOM05D007523 ORTHO05D009520 9.1e-16 87.8 111 61.3
MSTRG.11889 Avicennia marina HOM05D007523 ORTHO05D009520 1.2e-15 87.4 110 60.0
AagrBONN_evm.TU.Sc2ySwM_368.2556 Anthoceros agrestis HOM05D007523 ORTHO05D009520 2.6e-15 86.3 120 45.8
Os07g0143600 Oryza sativa ssp. japonica HOM05D007523 ORTHO05D009520 2.6e-15 86.3 132 51.5
Pp3c19_7810 Physcomitrium patens HOM05D007523 ORTHO05D009520 2.5e-13 79.7 88 60.2
Mapoly0010s0014 Marchantia polymorpha HOM05D007523 ORTHO05D009520 1.2e-12 77.4 122 50.0
SMO353G0121 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 1.2e-12 77.4 116 50.0
SMO364G0280 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 6.7e-11 71.6 78 66.7
CDE02G3979 Ceratophyllum demersum HOM05D007523 ORTHO05D009520 4.5e-07 58.9 120 35.8
AUR62044264 Chenopodium quinoa HOM05D007523 ORTHO05D009520 2.2e-06 56.6 67 76.1


User provided reference genes

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