Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G098500 Carya illinoinensis HOM05D004519 ORTHO05D006283 2.3e-265 918.3 462 100.0
Cfa012505 Carpinus fangiana HOM05D004519 ORTHO05D006283 8.2e-202 707.2 463 78.4
CiPaw.12G068400 Carya illinoinensis HOM05D004519 ORTHO05D006283 2.1e-197 692.6 396 87.1
MD06G1026700 Malus domestica HOM05D004519 ORTHO05D006283 1.4e-180 636.7 461 69.4
RcHm_v2.0_Chr7g0211781 Rosa chinensis HOM05D004519 ORTHO05D006283 1.4e-180 636.7 408 75.2
Ciclev10001047m.g Citrus clementina HOM05D004519 ORTHO05D006283 9.8e-179 630.6 465 69.0
FvH4_5g23060 Fragaria vesca HOM05D004519 ORTHO05D006283 8.3e-178 627.5 407 74.9
FAN18G3814 Fragaria x ananassa HOM05D004519 ORTHO05D006283 8.3e-178 627.5 407 74.9
MD16G1279400 Malus domestica HOM05D004519 ORTHO05D006283 1.4e-177 626.7 462 68.8
GSVIVG01013060001 Vitis vinifera HOM05D004519 ORTHO05D006283 2.4e-177 625.9 441 72.6
FAN04G1490 Fragaria x ananassa HOM05D004519 ORTHO05D006283 3.5e-176 622.1 452 69.7
Dinv29004 Davidia involucrata HOM05D004519 ORTHO05D006283 7.7e-176 620.9 461 71.1
PGR042G1943 Punica granatum HOM05D004519 ORTHO05D006283 1.6e-173 613.2 459 65.8
FAN13G3061 Fragaria x ananassa HOM05D004519 ORTHO05D006283 4.7e-173 611.7 408 73.8
Potri.001G136600 Populus trichocarpa HOM05D004519 ORTHO05D006283 4.7e-173 611.7 469 67.6
FAN18G1908 Fragaria x ananassa HOM05D004519 ORTHO05D006283 1.8e-172 609.8 475 66.5
CSS0024637 Camellia sinensis var. sinensis HOM05D004519 ORTHO05D006283 2.3e-172 609.4 462 69.3
Hma1.2p1_1569F.1_g291200 Hydrangea macrophylla HOM05D004519 ORTHO05D006283 2.0e-171 606.3 463 68.3
Dinv25262 Davidia involucrata HOM05D004519 ORTHO05D006283 9.8e-171 604.0 396 74.7
Manes.17G018849 Manihot esculenta HOM05D004519 ORTHO05D006283 1.7e-170 603.2 462 67.3
QL12p001672 Quercus lobata HOM05D004519 ORTHO05D006283 1.1e-169 600.5 549 58.3
CANSAT01G0127 Cannabis sativa HOM05D004519 ORTHO05D006283 5.4e-169 598.2 365 78.9
MELO3C003440.2 Cucumis melo HOM05D004519 ORTHO05D006283 2.7e-168 595.9 395 73.2
CsaV3_3G048840 Cucumis sativus L. HOM05D004519 ORTHO05D006283 1.1e-166 590.5 474 64.6
Nn1g00218 Nelumbo nucifera HOM05D004519 ORTHO05D006283 1.1e-166 590.5 400 71.5
TAR629G2035 Trochodendron aralioides HOM05D004519 ORTHO05D006283 1.5e-166 590.1 488 65.2
Lj4g0001331 Lotus japonicus HOM05D004519 ORTHO05D006283 1.0e-164 583.9 368 75.8
Sc01g0007150 Simmondsia chinensis HOM05D004519 ORTHO05D006283 1.4e-164 583.6 449 67.5
Gorai.004G182200 Gossypium raimondii HOM05D004519 ORTHO05D006283 2.3e-164 582.8 450 66.2
Eucgr.E00228 Eucalyptus grandis HOM05D004519 ORTHO05D006283 4.0e-164 582.0 401 70.1
Gorai.007G033500 Gossypium raimondii HOM05D004519 ORTHO05D006283 8.9e-164 580.9 445 67.2
Aqoxy3G02176 Aquilegia oxysepala HOM05D004519 ORTHO05D006283 1.2e-163 580.5 454 65.4
Oeu027094.2 Olea europaea HOM05D004519 ORTHO05D006283 1.2e-163 580.5 462 64.9
PSO063G4347 Papaver somniferum HOM05D004519 ORTHO05D006283 1.5e-163 580.1 465 64.9
Nn3g19385 Nelumbo nucifera HOM05D004519 ORTHO05D006283 2.6e-163 579.3 441 66.7
PSO782G3212 Papaver somniferum HOM05D004519 ORTHO05D006283 7.5e-163 577.8 465 64.3
THA.LOC104812759 Tarenaya hassleriana HOM05D004519 ORTHO05D006283 9.8e-163 577.4 423 67.6
Gohir.A11G028600 Gossypium hirsutum HOM05D004519 ORTHO05D006283 1.3e-162 577.0 396 72.5
Sed0022223 Sechium edule HOM05D004519 ORTHO05D006283 1.7e-162 576.6 442 66.5
Aa31LG2G13810 Aethionema arabicum HOM05D004519 ORTHO05D006283 1.1e-161 573.9 409 67.5
Lalb_Chr16g0381061 Lupinus albus HOM05D004519 ORTHO05D006283 7.0e-161 571.2 365 74.0
VMungo1215G0394 Vigna mungo HOM05D004519 ORTHO05D006283 9.2e-161 570.9 364 74.5
Thhalv10007540m.g Eutrema salsugineum HOM05D004519 ORTHO05D006283 1.2e-160 570.5 472 61.7
Sabra01G0105700 Salix brachista HOM05D004519 ORTHO05D006283 1.2e-160 570.5 513 61.0
Gohir.D11G030600 Gossypium hirsutum HOM05D004519 ORTHO05D006283 1.6e-160 570.1 396 71.7
TPR.G19434 Trifolium pratense HOM05D004519 ORTHO05D006283 2.0e-160 569.7 364 75.3
Duzib205G0301 Durio zibethinus HOM05D004519 ORTHO05D006283 2.7e-160 569.3 453 65.6
ClCG09G011630 Citrullus lanatus HOM05D004519 ORTHO05D006283 4.6e-160 568.5 481 62.6
BraA05t21393Z Brassica rapa HOM05D004519 ORTHO05D006283 5.9e-160 568.2 437 63.6
AL1G46330 Arabidopsis lyrata HOM05D004519 ORTHO05D006283 7.8e-160 567.8 463 61.1
AT1G32200 Arabidopsis thaliana HOM05D004519 ORTHO05D006283 7.8e-160 567.8 463 61.3
THA.LOC104814413 Tarenaya hassleriana HOM05D004519 ORTHO05D006283 7.8e-160 567.8 458 64.0
A05p25130 Brassica napus HOM05D004519 ORTHO05D006283 2.3e-159 566.2 408 66.7
Carub.0001s3053 Capsella rubella HOM05D004519 ORTHO05D006283 3.0e-159 565.8 463 60.5
Glyma.01G014200 Glycine max HOM05D004519 ORTHO05D006283 3.0e-159 565.8 389 71.2
Glyma.09G207900 Glycine max HOM05D004519 ORTHO05D006283 3.0e-159 565.8 389 71.0
Gohir.A03G000032 Gossypium hirsutum HOM05D004519 ORTHO05D006283 3.0e-159 565.8 402 69.9
BcaC05g27905 Brassica carinata HOM05D004519 ORTHO05D006283 6.6e-159 564.7 412 65.8
Medtr5g029230 Medicago truncatula HOM05D004519 ORTHO05D006283 1.5e-158 563.5 364 73.9
BcaB03g13753 Brassica carinata HOM05D004519 ORTHO05D006283 1.9e-158 563.1 460 62.8
Ca_25177_v3 Cicer arietinum L. HOM05D004519 ORTHO05D006283 1.9e-158 563.1 356 75.3
Sp1g27880 Schrenkiella parvula HOM05D004519 ORTHO05D006283 1.9e-158 563.1 489 60.1
CARHR031570 Cardamine hirsuta HOM05D004519 ORTHO05D006283 3.3e-158 562.4 466 61.6
HanXRQChr03g0083251 Helianthus annuus HOM05D004519 ORTHO05D006283 4.3e-158 562.0 453 63.8
Nitab4.5_0000529g0120 Nicotiana tabacum HOM05D004519 ORTHO05D006283 4.3e-158 562.0 470 62.3
MBI04_g32203_MAGBIO Magnolia biondii HOM05D004519 ORTHO05D006283 7.3e-158 561.2 492 60.8
Phvul.002G136600 Phaseolus vulgaris HOM05D004519 ORTHO05D006283 7.3e-158 561.2 364 72.8
BcaB07g32892 Brassica carinata HOM05D004519 ORTHO05D006283 9.5e-158 560.8 446 62.8
Lalb_Chr09g0325481 Lupinus albus HOM05D004519 ORTHO05D006283 9.5e-158 560.8 461 65.1
Psat2g139000 Pisum sativum HOM05D004519 ORTHO05D006283 9.5e-158 560.8 457 64.6
Gorai.003G185500 Gossypium raimondii HOM05D004519 ORTHO05D006283 1.2e-157 560.5 402 69.2
A09p34000 Brassica napus HOM05D004519 ORTHO05D006283 2.8e-157 559.3 444 63.5
Prupe.5G027200 Prunus persica HOM05D004519 ORTHO05D006283 3.6e-157 558.9 467 63.0
CAN.G726.25 Capsicum annuum HOM05D004519 ORTHO05D006283 8.0e-157 557.8 458 62.7
Migut.E00743 Erythranthe guttata HOM05D004519 ORTHO05D006283 8.0e-157 557.8 455 63.3
HanXRQChr13g0414231 Helianthus annuus HOM05D004519 ORTHO05D006283 1.0e-156 557.4 455 63.5
CSS0001538 Camellia sinensis var. sinensis HOM05D004519 ORTHO05D006283 3.1e-156 555.8 332 78.6
C05p31600 Brassica napus HOM05D004519 ORTHO05D006283 6.8e-156 554.7 396 67.7
BolC5t31883H Brassica oleracea HOM05D004519 ORTHO05D006283 6.8e-156 554.7 396 67.7
BcaC07g37628 Brassica carinata HOM05D004519 ORTHO05D006283 1.2e-155 553.9 449 62.1
ECA240G3299 Erigeron canadensis HOM05D004519 ORTHO05D006283 1.2e-155 553.9 454 62.6
SGA_v2.0_scaffold198G41070 Striga asiatica HOM05D004519 ORTHO05D006283 2.0e-155 553.1 479 60.1
BcaC05g27251 Brassica carinata HOM05D004519 ORTHO05D006283 7.5e-155 551.2 396 67.4
BcaB04g17996 Brassica carinata HOM05D004519 ORTHO05D006283 9.8e-155 550.8 451 61.9
BolC8t47999H Brassica oleracea HOM05D004519 ORTHO05D006283 9.8e-155 550.8 451 61.6
Cc08_g03490 Coffea canephora HOM05D004519 ORTHO05D006283 9.8e-155 550.8 473 61.9
Sopen08g025050 Solanum pennellii HOM05D004519 ORTHO05D006283 9.8e-155 550.8 458 62.2
A08p09320 Brassica napus HOM05D004519 ORTHO05D006283 1.3e-154 550.4 449 61.7
BraA08t32930Z Brassica rapa HOM05D004519 ORTHO05D006283 1.3e-154 550.4 449 61.7
Solyc08g076470.4 Solanum lycopersicum HOM05D004519 ORTHO05D006283 1.7e-154 550.1 458 62.0
MSTRG.24848 Avicennia marina HOM05D004519 ORTHO05D006283 2.2e-154 549.7 464 61.9
Lsat_1_v5_gn_6_80100 Lactuca sativa HOM05D004519 ORTHO05D006283 2.9e-154 549.3 453 62.5
ATR0829G164 Amborella trichopoda HOM05D004519 ORTHO05D006283 6.4e-154 548.1 471 60.5
Haze_08164 Corylus avellana HOM05D004519 ORTHO05D006283 1.9e-153 546.6 472 64.6
vmacro00276 Vaccinium macrocarpon HOM05D004519 ORTHO05D006283 6.6e-151 538.1 328 78.4
Rhsim11G0021900 Rhododendron simsii HOM05D004519 ORTHO05D006283 2.5e-150 536.2 597 52.3
Zm00001eb025080 Zea mays HOM05D004519 ORTHO05D006283 7.3e-150 534.6 355 69.9
Os10g0577900 Oryza sativa ssp. japonica HOM05D004519 ORTHO05D006283 3.6e-149 532.3 360 69.7
Zm00001eb224960 Zea mays HOM05D004519 ORTHO05D006283 4.7e-149 531.9 355 69.6
Lj2A231G41 Lonicera japonica HOM05D004519 ORTHO05D006283 8.1e-149 531.2 467 62.7
Thecc.03G310400 Theobroma cacao HOM05D004519 ORTHO05D006283 2.6e-147 526.2 408 66.7
Duzib068G1409 Durio zibethinus HOM05D004519 ORTHO05D006283 5.4e-145 518.5 408 65.2
SEGI_02196 Sequoiadendron giganteum HOM05D004519 ORTHO05D006283 7.1e-145 518.1 402 63.9
Gohir.D03G176300 Gossypium hirsutum HOM05D004519 ORTHO05D006283 2.1e-144 516.5 332 73.8
C05p39140 Brassica napus HOM05D004519 ORTHO05D006283 2.3e-143 513.1 373 65.7
DCAR_008221 Daucus carota HOM05D004519 ORTHO05D006283 2.3e-143 513.1 371 67.9
AUR62007353 Chenopodium quinoa HOM05D004519 ORTHO05D006283 6.6e-143 511.5 422 61.4
BraA09t38946Z Brassica rapa HOM05D004519 ORTHO05D006283 1.5e-142 510.4 444 60.1
AUR62018641 Chenopodium quinoa HOM05D004519 ORTHO05D006283 3.3e-142 509.2 356 69.1
CDE12G0245 Ceratophyllum demersum HOM05D004519 ORTHO05D006283 3.1e-140 502.7 435 59.5
arahy.Tifrunner.gnm1.ann1.BI8WMI Arachis hypogaea HOM05D004519 ORTHO05D006283 1.3e-138 497.3 344 69.5
arahy.Tifrunner.gnm1.ann1.D9NVDI Arachis hypogaea HOM05D004519 ORTHO05D006283 1.3e-138 497.3 344 69.5
FAN08G3243 Fragaria x ananassa HOM05D004519 ORTHO05D006283 2.1e-133 479.9 411 61.6
Gohir.D08G174500 Gossypium hirsutum HOM05D004519 ORTHO05D006283 1.1e-132 477.6 340 68.5
unitig_32.g10899 Utricularia gibba HOM05D004519 ORTHO05D006283 1.8e-132 476.9 416 58.4
Gohir.A08G153600 Gossypium hirsutum HOM05D004519 ORTHO05D006283 1.2e-131 474.2 340 68.2
CDE04G2515 Ceratophyllum demersum HOM05D004519 ORTHO05D006283 9.9e-131 471.1 436 56.2
Nitab4.5_0012493g0010 Nicotiana tabacum HOM05D004519 ORTHO05D006283 4.9e-130 468.8 291 75.3
Peaxi162Scf00170g00818 Petunia axillaris HOM05D004519 ORTHO05D006283 1.7e-127 460.3 387 60.2
EL10Ac5g12013 Beta vulgaris HOM05D004519 ORTHO05D006283 2.3e-127 459.9 414 57.0
Mapoly0045s0098 Marchantia polymorpha HOM05D004519 ORTHO05D006283 2.3e-127 459.9 455 50.1
HPP92_020895 Vanilla planifolia HOM05D004519 ORTHO05D006283 6.9e-124 448.4 305 70.5
SMO244G0022 Selaginella moellendorffii HOM05D004519 ORTHO05D006283 1.2e-120 437.6 353 58.6
HanXRQChr06g0172791 Helianthus annuus HOM05D004519 ORTHO05D006283 3.9e-119 432.6 353 60.9
Pp3c7_2970 Physcomitrium patens HOM05D004519 ORTHO05D006283 3.6e-117 426.0 364 52.7
Actinidia01317 Actinidia chinensis HOM05D004519 ORTHO05D006283 1.1e-116 424.5 328 66.8
EL10Ac5g12011 Beta vulgaris HOM05D004519 ORTHO05D006283 1.5e-115 420.6 393 55.2
Haze_08160 Corylus avellana HOM05D004519 ORTHO05D006283 7.9e-112 408.3 254 78.7
AagrBONN_evm.TU.Sc2ySwM_117.1032 Anthoceros agrestis HOM05D004547 ORTHO05D005133 2.1e-109 400.2 435 49.2
Cpa.g.sc208.3 Carica papaya HOM05D004519 ORTHO05D006283 1.5e-107 394.0 217 85.7
DCAR_004271 Daucus carota HOM05D004519 ORTHO05D006283 4.9e-106 389.0 246 74.0
CBR_g4494 Chara braunii HOM05D004519 ORTHO05D006283 2.5e-105 386.7 411 49.1
Eucgr.E01634 Eucalyptus grandis HOM05D004519 ORTHO05D006283 1.8e-100 370.5 249 69.9
Atru.chr6.1525 Acer truncatum HOM05D004519 ORTHO05D006283 3.9e-95 352.8 206 81.1
Cre02.g143000 Chlamydomonas reinhardtii HOM05D004519 ORTHO05D006283 8.2e-77 292.0 405 39.8
Actinidia29340 Actinidia chinensis HOM05D004519 ORTHO05D006283 1.2e-70 271.6 294 53.7
PRCOL_00006772 Prasinoderma coloniale HOM05D004519 ORTHO05D006283 1.0e-63 248.4 321 42.1
MCO03G317 Micromonas commoda HOM05D004519 ORTHO05D006283 1.1e-57 228.4 274 43.1
Hma1.2p1_3246F.1_g334370 Hydrangea macrophylla HOM05D004519 ORTHO05D006283 2.3e-50 204.1 176 60.2
Cpa.g.sc208.5 Carica papaya HOM05D004519 ORTHO05D006283 2.9e-37 160.6 213 47.4
MBI15_g25773_MAGBIO Magnolia biondii HOM05D004519 ORTHO05D006283 2.4e-36 157.5 98 71.4
Eucgr.A01818 Eucalyptus grandis HOM05D004519 ORTHO05D006283 1.2e-32 145.2 85 78.8
HanXRQChr16g0500211 Helianthus annuus HOM05D004519 ORTHO05D006283 1.6e-24 118.2 77 72.7
Haze_20066 Corylus avellana HOM05D004519 ORTHO05D007437 6.8e-23 112.8 95 60.0
arahy.Tifrunner.gnm1.ann1.LG4SFI Arachis hypogaea HOM05D000755 ORTHO05D017477 3.5e-19 100.5 108 50.9
PGSC0003DMG401014796 Solanum tuberosum HOM05D004519 ORTHO05D006283 3.0e-18 97.4 93 51.6
Actinidia01316 Actinidia chinensis HOM05D004519 ORTHO05D006283 2.5e-17 94.4 62 72.6
Gohir.D08G117301 Gossypium hirsutum HOM05D004519 ORTHO05D017048 1.6e-16 91.7 55 76.4
Gohir.D11G228750 Gossypium hirsutum HOM05D004519 ORTHO05D017048 1.6e-16 91.7 55 76.4
Gohir.D11G251850 Gossypium hirsutum HOM05D004519 ORTHO05D017048 1.6e-16 91.7 55 76.4
Gohir.D13G135501 Gossypium hirsutum HOM05D004519 ORTHO05D017048 4.7e-16 90.1 55 74.5
Gorai.008G116000 Gossypium raimondii HOM05D004519 ORTHO05D017048 2.4e-15 87.8 54 74.1
RcHm_v2.0_Chr5g0062811 Rosa chinensis HOM05D004519 ORTHO05D017048 1.3e-13 82.0 54 68.5
COL.COLO4_16939 Corchorus olitorius HOM05D004519 ORTHO05D006283 2.7e-11 74.3 76 57.9
Actinidia29341 Actinidia chinensis HOM05D004519 ORTHO05D052920 6.2e-08 63.2 32 84.4
arahy.Tifrunner.gnm1.ann1.18EICQ Arachis hypogaea HOM05D000755 ORTHO05D017477 1.2e-06 58.9 59 50.8


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