Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G098100 Carya illinoinensis HOM05D006137 ORTHO05D007697 5.8e-217 757.3 385 100.0
TWI15G1160 Tripterygium wilfordii HOM05D006137 ORTHO05D007697 1.6e-150 536.6 379 74.1
Dinv25255 Davidia involucrata HOM05D006137 ORTHO05D007697 3.0e-149 532.3 382 72.3
Potri.003G096600 Populus trichocarpa HOM05D006137 ORTHO05D007697 2.4e-146 522.7 370 74.1
Gohir.D12G208800 Gossypium hirsutum HOM05D006137 ORTHO05D007697 1.2e-145 520.4 385 70.6
Ciclev10001458m.g Citrus clementina HOM05D006137 ORTHO05D007697 1.0e-144 517.3 390 70.3
Gorai.008G224300 Gossypium raimondii HOM05D006137 ORTHO05D007697 1.3e-144 516.9 385 70.4
Gohir.A12G206400 Gossypium hirsutum HOM05D006137 ORTHO05D007697 5.0e-144 515.0 382 70.4
Thecc.03G309800 Theobroma cacao HOM05D006137 ORTHO05D007697 8.5e-144 514.2 373 72.4
TAR629G2895 Trochodendron aralioides HOM05D006137 ORTHO05D007697 1.9e-143 513.1 379 69.7
Duzib068G1414 Durio zibethinus HOM05D006137 ORTHO05D007697 1.2e-142 510.4 373 71.3
CSS0021967 Camellia sinensis var. sinensis HOM05D006137 ORTHO05D007697 2.7e-142 509.2 383 68.4
FAN08G1929 Fragaria x ananassa HOM05D006137 ORTHO05D007697 2.3e-141 506.1 387 70.0
GSVIVG01013108001 Vitis vinifera HOM05D006137 ORTHO05D007697 3.0e-141 505.8 386 68.4
FvH4_5g23010 Fragaria vesca HOM05D006137 ORTHO05D007697 5.2e-141 505.0 387 69.8
MD06G1026400 Malus domestica HOM05D006137 ORTHO05D007697 3.3e-140 502.3 349 73.4
RcHm_v2.0_Chr7g0211741 Rosa chinensis HOM05D006137 ORTHO05D007697 4.4e-140 501.9 384 70.3
FAN04G0555 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.7e-139 500.0 351 72.4
MELO3C013825.2 Cucumis melo HOM05D006137 ORTHO05D007697 2.2e-139 499.6 384 69.0
FvH4_2g06760 Fragaria vesca HOM05D006137 ORTHO05D007697 4.8e-139 498.4 357 71.7
CsaV3_3G001380 Cucumis sativus L. HOM05D006137 ORTHO05D007697 2.4e-138 496.1 377 70.0
Lj3g0008594 Lotus japonicus HOM05D006137 ORTHO05D007697 5.3e-138 495.0 379 67.8
FAN18G2668 Fragaria x ananassa HOM05D006137 ORTHO05D007697 2.0e-137 493.0 301 82.1
FAN13G2862 Fragaria x ananassa HOM05D006137 ORTHO05D007697 7.7e-137 491.1 368 69.8
PGR042G0393 Punica granatum HOM05D006137 ORTHO05D007697 6.5e-136 488.0 378 69.0
Glyma.01G014900 Glycine max HOM05D006137 ORTHO05D007697 8.5e-136 487.6 369 68.3
Lalb_Chr09g0325501 Lupinus albus HOM05D006137 ORTHO05D007697 1.1e-135 487.3 379 66.8
FAN18G2637 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.5e-135 486.9 422 64.0
Nn3g19394 Nelumbo nucifera HOM05D006137 ORTHO05D007697 1.9e-135 486.5 382 68.1
Atru.chr6.1520 Acer truncatum HOM05D006137 ORTHO05D007697 3.2e-135 485.7 380 67.6
VMungo1215G0535 Vigna mungo HOM05D006137 ORTHO05D007697 5.5e-135 485.0 374 67.9
COL.COLO4_16947 Corchorus olitorius HOM05D006137 ORTHO05D007697 6.1e-134 481.5 386 65.5
Hma1.2p1_1027F.1_g249480 Hydrangea macrophylla HOM05D006137 ORTHO05D007697 8.0e-134 481.1 388 66.0
Sabra03G0065200 Salix brachista HOM05D006137 ORTHO05D007697 8.0e-134 481.1 296 80.1
TPR.G19427 Trifolium pratense HOM05D006137 ORTHO05D007697 1.0e-133 480.7 384 64.8
Phvul.002G137400 Phaseolus vulgaris HOM05D006137 ORTHO05D007697 1.4e-133 480.3 375 67.2
Medtr5g029550 Medicago truncatula HOM05D006137 ORTHO05D007697 3.0e-133 479.2 380 66.3
ClCG10G001310 Citrullus lanatus HOM05D006137 ORTHO05D007697 2.6e-132 476.1 441 60.5
CSS0050317 Camellia sinensis var. sinensis HOM05D006137 ORTHO05D007697 1.3e-131 473.8 301 76.7
QL12p001513 Quercus lobata HOM05D006137 ORTHO05D007697 1.4e-130 470.3 354 72.9
CANSAT21G0548 Cannabis sativa HOM05D006137 ORTHO05D007697 3.5e-129 465.7 389 64.5
CANSAT21G0809 Cannabis sativa HOM05D006137 ORTHO05D007697 3.5e-129 465.7 390 64.6
arahy.Tifrunner.gnm1.ann1.3JZK2J Arachis hypogaea HOM05D006137 ORTHO05D007697 5.9e-129 464.9 317 72.2
arahy.Tifrunner.gnm1.ann1.J91B8N Arachis hypogaea HOM05D006137 ORTHO05D007697 5.9e-129 464.9 317 72.2
Thhalv10016768m.g Eutrema salsugineum HOM05D006137 ORTHO05D007697 1.3e-128 463.8 341 69.5
Rhsim11G0021000 Rhododendron simsii HOM05D006137 ORTHO05D007697 1.3e-128 463.8 397 64.2
AT2G35500 Arabidopsis thaliana HOM05D006137 ORTHO05D007697 1.5e-127 460.3 331 70.4
Sed0022354 Sechium edule HOM05D006137 ORTHO05D007697 2.5e-127 459.5 369 66.4
A04p26930 Brassica napus HOM05D006137 ORTHO05D007697 3.2e-127 459.1 340 68.5
BraA04t18192Z Brassica rapa HOM05D006137 ORTHO05D007697 5.5e-127 458.4 340 68.2
AL4G31550 Arabidopsis lyrata HOM05D006137 ORTHO05D007697 7.2e-127 458.0 331 69.5
C04p64320 Brassica napus HOM05D006137 ORTHO05D007697 7.2e-127 458.0 341 68.0
Carub.0004s1719 Capsella rubella HOM05D006137 ORTHO05D007697 1.6e-126 456.8 316 71.5
CARHR129650 Cardamine hirsuta HOM05D006137 ORTHO05D007697 1.6e-126 456.8 338 68.3
BolC4t27919H Brassica oleracea HOM05D006137 ORTHO05D007697 2.1e-126 456.4 316 70.9
Aqoxy2G03876 Aquilegia oxysepala HOM05D006137 ORTHO05D007697 2.7e-126 456.1 330 68.2
BcaB06g28845 Brassica carinata HOM05D006137 ORTHO05D007697 8.0e-126 454.5 372 63.7
Sp4g17720 Schrenkiella parvula HOM05D006137 ORTHO05D007697 1.0e-125 454.1 325 69.8
Nitab4.5_0002190g0020 Nicotiana tabacum HOM05D006137 ORTHO05D007697 2.3e-125 453.0 378 63.0
Psat2g138120 Pisum sativum HOM05D006137 ORTHO05D007697 3.0e-125 452.6 379 63.1
Solyc08g076410.4 Solanum lycopersicum HOM05D006137 ORTHO05D007697 5.2e-125 451.8 371 64.2
Sopen08g024990 Solanum pennellii HOM05D006137 ORTHO05D007697 6.8e-125 451.4 378 63.0
Cc08_g03270 Coffea canephora HOM05D006137 ORTHO05D007697 1.5e-124 450.3 373 62.2
PGSC0003DMG400014792 Solanum tuberosum HOM05D006137 ORTHO05D007697 9.8e-124 447.6 379 62.5
Haze_08142 Corylus avellana HOM05D006137 ORTHO05D007697 4.8e-123 445.3 521 53.2
Peaxi162Scf00170g00615 Petunia axillaris HOM05D006137 ORTHO05D007697 4.8e-123 445.3 380 61.1
CAN.G726.20 Capsicum annuum HOM05D006137 ORTHO05D007697 3.1e-122 442.6 374 62.6
HanXRQChr04g0098961 Helianthus annuus HOM05D006137 ORTHO05D007697 3.1e-122 442.6 367 61.0
THA.LOC104814417 Tarenaya hassleriana HOM05D006137 ORTHO05D007697 5.4e-122 441.8 327 67.3
BcaC02g07708 Brassica carinata HOM05D006137 ORTHO05D007697 7.0e-122 441.4 297 72.7
DCAR_008226 Daucus carota HOM05D006137 ORTHO05D007697 1.6e-121 440.3 303 72.3
PSO782G3150 Papaver somniferum HOM05D006137 ORTHO05D007697 3.5e-121 439.1 377 61.8
Prupe.5G028300 Prunus persica HOM05D006137 ORTHO05D007697 3.5e-121 439.1 372 65.3
Oeu017078.1 Olea europaea HOM05D006137 ORTHO05D007697 2.3e-120 436.4 301 70.8
FAN24G0436 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.5e-119 433.7 299 73.6
EL10Ac2g03238 Beta vulgaris HOM05D006137 ORTHO05D007697 2.5e-119 433.0 301 71.8
ECA233G6209 Erigeron canadensis HOM05D006137 ORTHO05D007697 2.3e-117 426.4 367 59.7
PSO063G4597 Papaver somniferum HOM05D006137 ORTHO05D007697 1.2e-116 424.1 308 68.2
Nitab4.5_0003416g0030 Nicotiana tabacum HOM05D006137 ORTHO05D007697 2.8e-115 419.5 378 59.5
Eucgr.E00233 Eucalyptus grandis HOM05D006137 ORTHO05D007697 1.1e-114 417.5 293 72.4
Aa31LG9G15490 Aethionema arabicum HOM05D006137 ORTHO05D007697 2.0e-113 413.3 267 75.7
Ah.09g233490 Amaranthus hybridus HOM05D006137 ORTHO05D007697 2.3e-112 409.8 357 60.8
MSTRG.24846 Avicennia marina HOM05D006137 ORTHO05D007697 2.3e-112 409.8 376 59.3
Migut.A01172 Erythranthe guttata HOM05D006137 ORTHO05D007697 2.9e-112 409.5 350 62.6
Sc24g0002950 Simmondsia chinensis HOM05D006137 ORTHO05D007697 8.6e-112 407.9 287 71.1
CDE06G2536 Ceratophyllum demersum HOM05D006137 ORTHO05D007697 1.1e-111 407.5 398 57.0
Lsat_1_v5_gn_6_3681 Lactuca sativa HOM05D006137 ORTHO05D007697 8.0e-110 401.4 370 56.8
HPP92_014848 Vanilla planifolia HOM05D006137 ORTHO05D007697 8.9e-109 397.9 317 63.7
Os10g0577700 Oryza sativa ssp. japonica HOM05D006137 ORTHO05D007697 4.4e-108 395.6 310 63.5
vmacro08163 Vaccinium macrocarpon HOM05D006137 ORTHO05D007697 9.8e-108 394.4 272 72.4
unitig_748.g7545 Utricularia gibba HOM05D006137 ORTHO05D007697 1.4e-106 390.6 357 57.7
Oeu019613.1 Olea europaea HOM05D006137 ORTHO05D007697 1.7e-99 367.1 318 60.7
Zm00001eb025030 Zea mays HOM05D006137 ORTHO05D007697 3.7e-99 365.9 363 54.0
SGA_v2.0_scaffold36G14297 Striga asiatica HOM05D006137 ORTHO05D007697 4.1e-98 362.5 344 59.9
FAN20G1935 Fragaria x ananassa HOM05D006137 ORTHO05D007697 7.0e-98 361.7 331 60.7
ATR0829G218 Amborella trichopoda HOM05D006137 ORTHO05D007697 6.6e-96 355.1 277 65.0
Oeu019614.1 Olea europaea HOM05D006137 ORTHO05D007697 4.3e-95 352.4 317 58.7
Lj2A232T29 Lonicera japonica HOM05D006137 ORTHO05D007697 4.7e-94 349.0 327 58.7
Oeu002327.1 Olea europaea HOM05D006137 ORTHO05D007697 5.8e-92 342.0 225 74.7
SEGI_14560 Sequoiadendron giganteum HOM05D006137 ORTHO05D007697 1.4e-85 320.9 360 49.2
Eucgr.E00231 Eucalyptus grandis HOM05D006137 ORTHO05D007697 1.8e-85 320.5 267 64.8
Manes.15G185701 Manihot esculenta HOM05D006137 ORTHO05D007697 1.3e-80 304.3 243 67.9
Mapoly0006s0263 Marchantia polymorpha HOM05D006137 ORTHO05D007697 9.6e-79 298.1 357 45.4
SMO228G0118 Selaginella moellendorffii HOM05D006137 ORTHO05D007697 8.4e-75 285.0 304 48.4
Pp3c12_17740 Physcomitrium patens HOM05D006137 ORTHO05D007697 2.5e-71 273.5 334 42.5
AagrBONN_evm.TU.Sc2ySwM_344.1996 Anthoceros agrestis HOM05D006137 ORTHO05D007697 5.6e-71 272.3 302 46.4
Ca_25185_v3 Cicer arietinum L. HOM05D006137 ORTHO05D007697 5.8e-68 262.3 231 61.5
Hund09822 Selenicereus undatus HOM05D006137 ORTHO05D007697 3.4e-60 236.5 157 76.4
AUR62002644 Chenopodium quinoa HOM05D006137 ORTHO05D007697 2.7e-57 226.9 205 58.5
Oeu033557.2 Olea europaea HOM05D006137 ORTHO05D007697 1.7e-51 207.6 168 61.9
C03p78000 Brassica napus HOM05D006137 ORTHO05D007697 1.6e-46 191.0 157 63.1
AUR62002645 Chenopodium quinoa HOM05D006137 ORTHO05D007697 1.1e-45 188.3 163 58.3
BolC1t02019H Brassica oleracea HOM05D006137 ORTHO05D007697 1.5e-44 184.5 159 62.3
AUR62040998 Chenopodium quinoa HOM05D006137 ORTHO05D007697 5.0e-43 179.5 136 63.2
Hund09821 Selenicereus undatus HOM05D006137 ORTHO05D000006 3.6e-41 173.3 129 62.8
C01p20920 Brassica napus HOM05D006137 ORTHO05D007697 7.4e-39 165.6 164 55.5
Glyma.07G152633 Glycine max HOM05D006137 ORTHO05D007697 1.3e-38 164.9 112 68.8
BolC3t20061H Brassica oleracea HOM05D006137 ORTHO05D007697 1.7e-38 164.5 164 54.9
CBR_g18978 Chara braunii HOM05D006137 ORTHO05D007697 5.5e-34 149.4 184 45.7
MCO11G470 Micromonas commoda HOM05D006137 ORTHO05D007697 1.7e-30 137.9 195 37.4
AUR62040999 Chenopodium quinoa HOM05D006137 ORTHO05D007697 2.5e-26 124.0 110 62.7
Medtr1g009450 Medicago truncatula HOM05D006137 ORTHO05D007697 3.6e-25 120.2 125 53.6
PRCOL_00002339 Prasinoderma coloniale HOM05D006137 ORTHO05D007697 8.0e-25 119.0 196 35.2
C02p41610 Brassica napus HOM05D006137 ORTHO05D007697 1.9e-10 71.2 36 80.6
BolC2t10179H Brassica oleracea HOM05D006137 ORTHO05D007697 1.9e-10 71.2 36 80.6
BolC2t11174H Brassica oleracea HOM05D006137 ORTHO05D007697 6.1e-09 66.2 31 83.9
BcaC09g50780 Brassica carinata HOM05D006137 ORTHO05D007697 3.0e-08 63.9 96 44.8
Cre16.g659850 Chlamydomonas reinhardtii HOM05D006137 ORTHO05D007697 1.5e-07 61.6 203 26.6
MCO12G135 Micromonas commoda HOM05D002058 ORTHO05D003758 2.8e-06 57.4 109 29.4
Mapoly0089s0033 Marchantia polymorpha HOM05D002058 ORTHO05D003758 8.3e-06 55.8 139 30.2


User provided reference genes

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