Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G097500 Carya illinoinensis HOM05D002388 ORTHO05D008833 9.5e-37 156.4 81 100.0
Potri.001G138100 Populus trichocarpa HOM05D002388 ORTHO05D008833 1.5e-34 149.1 81 91.4
QL12p001301 Quercus lobata HOM05D002388 ORTHO05D008833 2.6e-34 148.3 80 91.2
MD06G1025500 Malus domestica HOM05D002388 ORTHO05D008833 5.7e-34 147.1 81 90.1
Prupe.5G029600 Prunus persica HOM05D002388 ORTHO05D008833 5.7e-34 147.1 81 90.1
Ciclev10003014m.g Citrus clementina HOM05D002388 ORTHO05D008833 1.7e-33 145.6 81 90.1
Eucgr.D02219 Eucalyptus grandis HOM05D002388 ORTHO05D008833 2.2e-33 145.2 81 91.4
MD16G1280900 Malus domestica HOM05D002388 ORTHO05D008833 2.2e-33 145.2 81 87.7
Sabra01G0106900 Salix brachista HOM05D002388 ORTHO05D008833 2.2e-33 145.2 81 87.7
CiPaw.12G067300 Carya illinoinensis HOM05D002388 ORTHO05D008833 2.8e-33 144.8 81 90.1
TAR375G0363 Trochodendron aralioides HOM05D002388 ORTHO05D008833 3.7e-33 144.4 81 87.7
TWI60G0513 Tripterygium wilfordii HOM05D002388 ORTHO05D008833 4.9e-33 144.1 81 86.4
TWI81G0136 Tripterygium wilfordii HOM05D002388 ORTHO05D008833 4.9e-33 144.1 81 85.2
Haze_08171 Corylus avellana HOM05D002388 ORTHO05D008833 8.3e-33 143.3 81 90.1
THA.LOC104804589 Tarenaya hassleriana HOM05D002388 ORTHO05D008833 1.4e-32 142.5 81 90.1
Dinv28991 Davidia involucrata HOM05D002388 ORTHO05D008833 1.8e-32 142.1 81 90.1
Glyma.10G041600 Glycine max HOM05D002388 ORTHO05D008833 1.8e-32 142.1 81 87.7
Hma1.2p1_0870F.1_g230830 Hydrangea macrophylla HOM05D002388 ORTHO05D008833 2.4e-32 141.7 80 87.5
Medtr8g066600 Medicago truncatula HOM05D002388 ORTHO05D008833 3.1e-32 141.4 81 86.4
FAN04G1000 Fragaria x ananassa HOM05D002388 ORTHO05D008833 4.1e-32 141.0 81 87.7
FAN18G1485 Fragaria x ananassa HOM05D002388 ORTHO05D008833 4.1e-32 141.0 81 87.7
Actinidia14785 Actinidia chinensis HOM05D002388 ORTHO05D008833 7.0e-32 140.2 81 88.9
RcHm_v2.0_Chr7g0211611 Rosa chinensis HOM05D002388 ORTHO05D008833 7.0e-32 140.2 81 87.7
Thecc.03G308600 Theobroma cacao HOM05D002388 ORTHO05D008833 7.0e-32 140.2 81 87.7
DCAR_004281 Daucus carota HOM05D002388 ORTHO05D008833 9.2e-32 139.8 81 86.4
Glyma.13G128600 Glycine max HOM05D002388 ORTHO05D008833 9.2e-32 139.8 81 86.4
PGR031G2620 Punica granatum HOM05D002388 ORTHO05D008833 9.2e-32 139.8 79 88.6
arahy.Tifrunner.gnm1.ann1.Y11EX9 Arachis hypogaea HOM05D002388 ORTHO05D008833 1.2e-31 139.4 81 85.2
Duzib068G0043 Durio zibethinus HOM05D002388 ORTHO05D008833 1.2e-31 139.4 81 88.9
FAN08G0310 Fragaria x ananassa HOM05D002388 ORTHO05D008833 1.2e-31 139.4 81 85.2
Nn3g19407 Nelumbo nucifera HOM05D002388 ORTHO05D008833 1.2e-31 139.4 81 86.4
TPR.G3364 Trifolium pratense HOM05D002388 ORTHO05D008833 1.2e-31 139.4 81 87.7
SalBow6G3465 Salvia bowleyana HOM05D002388 ORTHO05D008833 1.6e-31 139.0 81 86.4
Lj1g0006191 Lotus japonicus HOM05D002388 ORTHO05D008833 2.7e-31 138.3 81 85.2
Manes.04G058600 Manihot esculenta HOM05D002388 ORTHO05D008833 2.7e-31 138.3 79 87.3
GSVIVG01013070001 Vitis vinifera HOM05D002388 ORTHO05D008833 2.7e-31 138.3 78 85.9
Cc08_g03400 Coffea canephora HOM05D002388 ORTHO05D008833 3.5e-31 137.9 81 82.7
Duzib205G0142 Durio zibethinus HOM05D002388 ORTHO05D008833 3.5e-31 137.9 81 87.7
Gohir.D08G175050 Gossypium hirsutum HOM05D002388 ORTHO05D008833 3.5e-31 137.9 81 87.7
Gorai.004G182800 Gossypium raimondii HOM05D002388 ORTHO05D008833 3.5e-31 137.9 81 87.7
PSO384G4479 Papaver somniferum HOM05D002388 ORTHO05D008833 3.5e-31 137.9 81 86.4
Psat4g122960 Pisum sativum HOM05D002388 ORTHO05D008833 4.5e-31 137.5 81 85.2
SGA_v2.0_scaffold20G09240 Striga asiatica HOM05D002388 ORTHO05D008833 4.5e-31 137.5 80 83.8
Medtr2g014320 Medicago truncatula HOM05D002388 ORTHO05D008833 5.9e-31 137.1 78 85.9
TAR119G0002 Trochodendron aralioides HOM05D002388 ORTHO05D008833 7.8e-31 136.7 81 85.2
CANSAT21G0073 Cannabis sativa HOM05D002388 ORTHO05D008833 1.0e-30 136.3 81 86.4
PSO339G0280 Papaver somniferum HOM05D002388 ORTHO05D008833 1.0e-30 136.3 81 85.2
CAN.G137.4 Capsicum annuum HOM05D002388 ORTHO05D008833 1.3e-30 136.0 81 84.0
Migut.A01083 Erythranthe guttata HOM05D002388 ORTHO05D008833 1.3e-30 136.0 81 81.5
Peaxi162Scf00185g00821 Petunia axillaris HOM05D002388 ORTHO05D008833 1.3e-30 136.0 81 84.0
vmacro14193 Vaccinium macrocarpon HOM05D002388 ORTHO05D008833 2.3e-30 135.2 81 84.0
CSS0033524 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 2.9e-30 134.8 81 85.2
Aa31LG4G4590 Aethionema arabicum HOM05D002388 ORTHO05D008833 3.8e-30 134.4 81 86.4
A02p19260 Brassica napus HOM05D002388 ORTHO05D008833 3.8e-30 134.4 81 86.4
BolC2t09212H Brassica oleracea HOM05D002388 ORTHO05D008833 3.8e-30 134.4 81 86.4
BraA07t31559Z Brassica rapa HOM05D002388 ORTHO05D008833 3.8e-30 134.4 81 86.4
CSS0026703 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 3.8e-30 134.4 81 85.2
Carub.0002s2112 Capsella rubella HOM05D002388 ORTHO05D008833 3.8e-30 134.4 81 86.4
Thhalv10019650m.g Eutrema salsugineum HOM05D002388 ORTHO05D008833 3.8e-30 134.4 81 86.4
Nitab4.5_0000556g0150 Nicotiana tabacum HOM05D002388 ORTHO05D008833 3.8e-30 134.4 81 82.7
EL10Ac5g12027 Beta vulgaris HOM05D002388 ORTHO05D008833 5.0e-30 134.0 81 84.0
BraA02t06971Z Brassica rapa HOM05D002388 ORTHO05D008833 5.0e-30 134.0 81 86.4
AUR62018655 Chenopodium quinoa HOM05D002388 ORTHO05D008833 5.0e-30 134.0 81 86.4
AL2G34200 Arabidopsis lyrata HOM05D003614 ORTHO05D004156 6.6e-30 133.7 81 85.2
AT1G74340 Arabidopsis thaliana HOM05D002388 ORTHO05D008833 6.6e-30 133.7 81 85.2
Cpa.g.sc13.304 Carica papaya HOM05D002388 ORTHO05D008833 6.6e-30 133.7 81 85.2
COL.COLO4_16958 Corchorus olitorius HOM05D002388 ORTHO05D008833 6.6e-30 133.7 81 86.4
CsaV3_3G001440 Cucumis sativus L. HOM05D002388 ORTHO05D008833 6.6e-30 133.7 81 84.0
Sed0013912 Sechium edule HOM05D002388 ORTHO05D008833 6.6e-30 133.7 81 84.0
MELO3C013830.2 Cucumis melo HOM05D002388 ORTHO05D008833 8.6e-30 133.3 81 82.7
Sp5g29500 Schrenkiella parvula HOM05D002388 ORTHO05D008833 8.6e-30 133.3 81 85.2
CARHR067600 Cardamine hirsuta HOM05D002388 ORTHO05D008833 1.1e-29 132.9 81 84.0
AUR62007344 Chenopodium quinoa HOM05D002388 ORTHO05D008833 1.1e-29 132.9 81 86.4
CAN.G474.16 Capsicum annuum HOM05D002388 ORTHO05D008833 1.5e-29 132.5 81 81.5
Nitab4.5_0002778g0070 Nicotiana tabacum HOM05D002388 ORTHO05D008833 1.5e-29 132.5 80 82.5
Peaxi162Scf00045g00216 Petunia axillaris HOM05D002388 ORTHO05D008833 1.9e-29 132.1 81 80.2
BcaC08g46864 Brassica carinata HOM05D002388 ORTHO05D008833 2.5e-29 131.7 81 85.2
BolC6t39879H Brassica oleracea HOM05D002388 ORTHO05D008833 2.5e-29 131.7 81 85.2
HanXRQChr17g0538091 Helianthus annuus HOM05D002388 ORTHO05D008833 2.5e-29 131.7 81 77.8
Solyc08g005210.3 Solanum lycopersicum HOM05D002388 ORTHO05D008833 2.5e-29 131.7 81 81.5
Sopen08g001240 Solanum pennellii HOM05D002388 ORTHO05D008833 2.5e-29 131.7 81 81.5
Ah.12g055420 Amaranthus hybridus HOM05D002388 ORTHO05D008833 4.3e-29 131.0 81 80.2
ECA246G0855 Erigeron canadensis HOM05D002388 ORTHO05D008833 5.6e-29 130.6 81 77.8
Nitab4.5_0000109g0080 Nicotiana tabacum HOM05D002388 ORTHO05D008833 7.3e-29 130.2 81 80.2
Nitab4.5_0001632g0030 Nicotiana tabacum HOM05D002388 ORTHO05D008833 7.3e-29 130.2 81 80.2
Sopen06g021590 Solanum pennellii HOM05D002388 ORTHO05D008833 1.2e-28 129.4 81 79.0
CSS0009097 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 1.6e-28 129.0 80 83.8
Phvul.003G283500 Phaseolus vulgaris HOM05D002388 ORTHO05D008833 2.1e-28 128.6 81 77.8
Peaxi162Scf00038g00010 Petunia axillaris HOM05D002388 ORTHO05D008833 2.8e-28 128.3 79 79.7
Lalb_Chr05g0225791 Lupinus albus HOM05D002388 ORTHO05D008833 3.6e-28 127.9 81 81.5
PGSC0003DMG400016784 Solanum tuberosum HOM05D002388 ORTHO05D008833 3.6e-28 127.9 81 77.8
Solyc06g066400.3 Solanum lycopersicum HOM05D002388 ORTHO05D008833 4.7e-28 127.5 81 77.8
CSS0006499 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 8.0e-28 126.7 80 82.5
Lsat_1_v5_gn_3_19620 Lactuca sativa HOM05D002388 ORTHO05D008833 1.4e-27 125.9 83 74.7
PGSC0003DMG400003487 Solanum tuberosum HOM05D002388 ORTHO05D008833 1.4e-27 125.9 81 79.0
unitig_32.g10897 Utricularia gibba HOM05D002388 ORTHO05D008833 3.0e-27 124.8 81 75.3
CDE05G0657 Ceratophyllum demersum HOM05D002388 ORTHO05D008833 8.9e-27 123.2 80 75.0
Os11g0311550 Oryza sativa ssp. japonica HOM05D002388 ORTHO05D008833 8.9e-27 123.2 79 77.2
ATR0564G363 Amborella trichopoda HOM05D002388 ORTHO05D008833 4.4e-26 120.9 81 74.1
THA.LOC104808763 Tarenaya hassleriana HOM05D002388 ORTHO05D008833 2.0e-23 112.1 76 75.0
SEGI_36022 Sequoiadendron giganteum HOM05D002388 ORTHO05D008833 4.6e-23 110.9 81 66.7
Mapoly0067s0029 Marchantia polymorpha HOM05D002388 ORTHO05D008833 1.6e-20 102.4 80 62.5
PGSC0003DMG400043827 Solanum tuberosum HOM05D002388 ORTHO05D008833 1.6e-20 102.4 81 67.9
Nn1g00187 Nelumbo nucifera HOM05D002388 ORTHO05D008833 3.6e-20 101.3 57 87.7
Pp3c22_2990 Physcomitrium patens HOM05D002388 ORTHO05D008833 3.4e-18 94.7 80 58.8
AagrBONN_evm.TU.Sc2ySwM_228.4391 Anthoceros agrestis HOM05D003123 ORTHO05D003492 5.8e-18 94.0 76 57.9
CSS0023919 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 8.3e-17 90.1 78 66.7
Hund14364 Selenicereus undatus HOM05D002388 ORTHO05D008833 1.9e-16 89.0 51 86.3
arahy.Tifrunner.gnm1.ann1.G961TR Arachis hypogaea HOM05D002388 ORTHO05D008833 7.0e-16 87.0 82 58.5
ClCG10G001370 Citrullus lanatus HOM05D002388 ORTHO05D008833 1.6e-15 85.9 53 81.1
SEGI_14802 Sequoiadendron giganteum HOM05D002388 ORTHO05D008833 1.6e-15 85.9 64 65.6
Os02g0140101 Oryza sativa ssp. japonica HOM05D002388 ORTHO05D008833 6.0e-15 84.0 49 81.6
BcaB05g24849 Brassica carinata HOM05D002388 ORTHO05D008833 3.0e-14 81.6 50 82.0
PGSC0003DMG400016734 Solanum tuberosum HOM05D002388 ORTHO05D008833 3.0e-14 81.6 55 72.7
MCO11G506 Micromonas commoda HOM05D002388 ORTHO05D008833 1.6e-07 59.3 68 39.7
Peaxi162Scf00218g02111 Petunia axillaris HOM05D004298 ORTHO05D008833 4.6e-07 57.8 39 61.5


User provided reference genes

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