Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G091800 Carya illinoinensis HOM05D007134 ORTHO05D009004 7.0e-192 673.7 321 100.0
Cfa012416 Carpinus fangiana HOM05D007134 ORTHO05D009004 1.4e-163 579.7 321 84.7
Haze_08260 Corylus avellana HOM05D007134 ORTHO05D009004 1.4e-160 569.7 334 80.8
TAR629G3531 Trochodendron aralioides HOM05D007134 ORTHO05D009004 2.9e-137 492.3 314 72.6
Dinv28939 Davidia involucrata HOM05D007134 ORTHO05D009004 8.4e-137 490.7 319 72.4
Atru.chr6.1744 Acer truncatum HOM05D007134 ORTHO05D009004 2.4e-136 489.2 321 72.9
Potri.001G144000 Populus trichocarpa HOM05D007134 ORTHO05D009004 3.0e-134 482.3 320 69.1
Prupe.5G039700 Prunus persica HOM05D007134 ORTHO05D009004 5.1e-134 481.5 321 71.7
GSVIVG01013189001 Vitis vinifera HOM05D007134 ORTHO05D009004 6.6e-134 481.1 291 79.7
TPR.G28658 Trifolium pratense HOM05D007134 ORTHO05D009004 1.5e-133 479.9 315 72.1
Actinidia03384 Actinidia chinensis HOM05D007134 ORTHO05D009004 1.9e-133 479.6 326 69.6
Ca_22068_v3 Cicer arietinum L. HOM05D007134 ORTHO05D009004 5.6e-133 478.0 310 71.0
Thecc.03G230400 Theobroma cacao HOM05D007134 ORTHO05D009004 1.4e-131 473.4 297 73.4
ClCG10G001760 Citrullus lanatus HOM05D007134 ORTHO05D009004 3.1e-131 472.2 316 69.6
COL.COLO4_17065 Corchorus olitorius HOM05D007134 ORTHO05D009004 3.1e-131 472.2 296 73.0
Psat4g079040 Pisum sativum HOM05D007134 ORTHO05D009004 4.0e-131 471.9 315 70.2
Manes.15G172000 Manihot esculenta HOM05D007134 ORTHO05D009004 1.5e-130 469.9 314 71.0
Glyma.05G112400 Glycine max HOM05D007134 ORTHO05D009004 2.6e-130 469.2 315 70.5
Phvul.003G230000 Phaseolus vulgaris HOM05D007134 ORTHO05D009004 2.6e-130 469.2 318 70.4
Duzib205G1618 Durio zibethinus HOM05D007134 ORTHO05D009004 7.6e-130 467.6 297 73.4
Lalb_Chr05g0220571 Lupinus albus HOM05D007134 ORTHO05D009004 7.6e-130 467.6 321 68.5
CSS0021568 Camellia sinensis var. sinensis HOM05D007134 ORTHO05D009004 9.9e-130 467.2 318 70.1
CANSAT21G0276 Cannabis sativa HOM05D007134 ORTHO05D009004 9.9e-130 467.2 304 72.7
Hma1.2p1_0991F.1_g244990 Hydrangea macrophylla HOM05D007134 ORTHO05D009004 9.9e-130 467.2 299 73.9
Hma1.2p1_2785F.1_g328490 Hydrangea macrophylla HOM05D007134 ORTHO05D009004 1.7e-129 466.5 298 73.5
RcHm_v2.0_Chr7g0209231 Rosa chinensis HOM05D007134 ORTHO05D009004 6.4e-129 464.5 312 71.2
Sabra01G0112400 Salix brachista HOM05D007134 ORTHO05D009004 6.4e-129 464.5 351 63.2
Glyma.17G154600 Glycine max HOM05D007134 ORTHO05D009004 1.1e-128 463.8 300 73.7
Gohir.D12G211900 Gossypium hirsutum HOM05D007134 ORTHO05D009004 1.1e-128 463.8 297 73.4
Gorai.008G227500 Gossypium raimondii HOM05D007134 ORTHO05D009004 1.1e-128 463.8 297 73.4
Lj4g0007831 Lotus japonicus HOM05D007134 ORTHO05D009004 4.2e-128 461.8 299 72.2
MD06G1032400 Malus domestica HOM05D007134 ORTHO05D009004 4.2e-128 461.8 309 71.2
arahy.Tifrunner.gnm1.ann1.2XNM6Q Arachis hypogaea HOM05D007134 ORTHO05D009004 1.6e-127 459.9 320 68.1
arahy.Tifrunner.gnm1.ann1.40JZG2 Arachis hypogaea HOM05D007134 ORTHO05D009004 4.6e-127 458.4 320 68.4
PSO782G3567 Papaver somniferum HOM05D007134 ORTHO05D009004 5.1e-126 454.9 318 67.0
TWI81G0484 Tripterygium wilfordii HOM05D007134 ORTHO05D009004 1.9e-125 453.0 302 69.2
FAN08G2031 Fragaria x ananassa HOM05D007134 ORTHO05D009004 3.3e-125 452.2 309 70.6
MELO3C013860.2 Cucumis melo HOM05D007134 ORTHO05D009004 4.3e-125 451.8 318 67.0
FvH4_5g21740 Fragaria vesca HOM05D007134 ORTHO05D009004 7.4e-125 451.1 309 70.2
Sed0020644 Sechium edule HOM05D007134 ORTHO05D009004 9.6e-125 450.7 314 67.2
Eucgr.E00292 Eucalyptus grandis HOM05D007134 ORTHO05D009004 1.3e-124 450.3 319 66.8
FAN13G3184 Fragaria x ananassa HOM05D007134 ORTHO05D009004 1.6e-124 449.9 321 68.2
Ciclev10032247m.g Citrus clementina HOM05D007134 ORTHO05D009004 2.1e-124 449.5 296 72.0
PGR042G2424 Punica granatum HOM05D007134 ORTHO05D009004 2.1e-124 449.5 310 68.4
Lj8A293T18 Lonicera japonica HOM05D007134 ORTHO05D009004 4.8e-124 448.4 299 70.6
Nitab4.5_0002931g0030 Nicotiana tabacum HOM05D007134 ORTHO05D009004 2.9e-121 439.1 299 68.6
Peaxi162Scf00006g04220 Petunia axillaris HOM05D007134 ORTHO05D009004 3.8e-121 438.7 299 67.9
Solyc08g077090.3 Solanum lycopersicum HOM05D007134 ORTHO05D009004 4.9e-121 438.3 299 68.2
FAN18G1678 Fragaria x ananassa HOM05D007134 ORTHO05D009004 6.4e-121 438.0 334 65.0
CsaV3_3G001860 Cucumis sativus L. HOM05D007134 ORTHO05D009004 1.4e-120 436.8 289 70.2
Aqoxy3G02427 Aquilegia oxysepala HOM05D007134 ORTHO05D009004 7.1e-120 434.5 301 68.4
CAN.G1659.3 Capsicum annuum HOM05D007134 ORTHO05D009004 7.1e-120 434.5 299 66.9
Sopen08g025670 Solanum pennellii HOM05D007134 ORTHO05D009004 2.1e-119 433.0 301 68.1
Sc01g0007540 Simmondsia chinensis HOM05D007134 ORTHO05D009004 4.6e-119 431.8 313 62.3
Nitab4.5_0001276g0070 Nicotiana tabacum HOM05D007134 ORTHO05D009004 3.3e-117 425.6 288 69.4
THA.LOC104814437 Tarenaya hassleriana HOM05D007134 ORTHO05D009004 9.6e-117 424.1 306 66.0
PGSC0003DMG400017530 Solanum tuberosum HOM05D007134 ORTHO05D009004 6.2e-116 421.4 324 62.7
AL4G31350 Arabidopsis lyrata HOM05D007134 ORTHO05D009004 1.1e-115 420.6 300 67.7
Thhalv10016981m.g Eutrema salsugineum HOM05D007134 ORTHO05D009004 5.3e-115 418.3 315 65.7
AT2G35320 Arabidopsis thaliana HOM05D007134 ORTHO05D009004 6.9e-115 417.9 301 66.1
AL457U10010 Arabidopsis lyrata HOM05D007134 ORTHO05D009004 9.0e-115 417.5 300 67.3
Carub.0004s1701 Capsella rubella HOM05D007134 ORTHO05D009004 1.5e-114 416.8 298 66.8
Sp4g17520 Schrenkiella parvula HOM05D007134 ORTHO05D009004 2.0e-114 416.4 300 67.0
EL10Ac5g12144 Beta vulgaris HOM05D007134 ORTHO05D009004 4.5e-114 415.2 307 63.8
Rhsim11G0013400 Rhododendron simsii HOM05D007134 ORTHO05D009004 1.7e-113 413.3 428 51.9
CDE12G0960 Ceratophyllum demersum HOM05D007134 ORTHO05D009004 4.9e-113 411.8 298 67.1
AUR62007266 Chenopodium quinoa HOM05D007134 ORTHO05D009004 4.9e-113 411.8 312 62.2
Ah.12g054890 Amaranthus hybridus HOM05D007134 ORTHO05D009004 4.2e-112 408.7 312 62.2
Cc08_g02480 Coffea canephora HOM05D007134 ORTHO05D009004 4.2e-112 408.7 289 66.4
A03p19520 Brassica napus HOM05D007134 ORTHO05D009004 5.5e-112 408.3 298 64.8
BraA03t11205Z Brassica rapa HOM05D007134 ORTHO05D009004 5.5e-112 408.3 298 64.8
Aa31LG9G15330 Aethionema arabicum HOM05D007134 ORTHO05D009004 7.1e-112 407.9 294 66.3
CARHR129460 Cardamine hirsuta HOM05D007134 ORTHO05D009004 9.3e-112 407.5 300 64.3
MSTRG.6669 Avicennia marina HOM05D007134 ORTHO05D009004 2.7e-111 406.0 300 65.3
C03p22750 Brassica napus HOM05D007134 ORTHO05D009004 1.8e-110 403.3 312 61.9
CDE04G0512 Ceratophyllum demersum HOM05D007134 ORTHO05D009004 2.3e-110 402.9 315 63.8
Oeu036071.3 Olea europaea HOM05D007134 ORTHO05D009004 2.5e-109 399.4 333 59.5
Gohir.A12G209200 Gossypium hirsutum HOM05D007134 ORTHO05D009004 7.4e-109 397.9 259 73.0
BolC3t14673H Brassica oleracea HOM05D007134 ORTHO05D009004 9.7e-109 397.5 298 63.4
ATR0049G037 Amborella trichopoda HOM05D007134 ORTHO05D009004 3.7e-108 395.6 301 62.5
ECA233G0754 Erigeron canadensis HOM05D007134 ORTHO05D009004 2.4e-107 392.9 295 64.4
SGA_v2.0_scaffold34G13941 Striga asiatica HOM05D007134 ORTHO05D009004 4.1e-107 392.1 298 62.1
Lsat_1_v5_gn_6_64760 Lactuca sativa HOM05D007134 ORTHO05D009004 2.9e-105 386.0 298 61.1
SalBow7G3039 Salvia bowleyana HOM05D007134 ORTHO05D009004 5.0e-105 385.2 299 61.5
DCAR_032214 Daucus carota HOM05D007134 ORTHO05D009004 3.2e-104 382.5 300 59.3
Hund11255 Selenicereus undatus HOM05D007134 ORTHO05D009004 5.5e-104 381.7 333 57.4
SalBow7G1996 Salvia bowleyana HOM05D007134 ORTHO05D009004 9.4e-104 380.9 295 62.4
Migut.M00165 Erythranthe guttata HOM05D007134 ORTHO05D009004 2.1e-103 379.8 290 62.8
vmacro00339 Vaccinium macrocarpon HOM05D007134 ORTHO05D009004 4.6e-103 378.6 451 46.6
Nn6g33621 Nelumbo nucifera HOM05D007134 ORTHO05D009004 1.3e-100 370.5 302 59.6
HanXRQChr06g0178411 Helianthus annuus HOM05D007134 ORTHO05D009004 1.4e-99 367.1 297 59.6
Os06g0110100 Oryza sativa ssp. japonica HOM05D007134 ORTHO05D009004 2.0e-98 363.2 289 60.2
FAN04G0135 Fragaria x ananassa HOM05D007134 ORTHO05D009004 1.3e-97 360.5 309 59.2
Zm00001eb417090 Zea mays HOM05D007134 ORTHO05D009004 1.7e-97 360.1 289 60.6
unitig_749.g14086 Utricularia gibba HOM05D007134 ORTHO05D009004 3.8e-97 359.0 289 60.2
PSO063G6706 Papaver somniferum HOM05D007134 ORTHO05D009004 2.0e-93 346.7 318 53.5
BcaC01g05731 Brassica carinata HOM05D007134 ORTHO05D009004 2.0e-90 336.7 298 56.7
Medtr4g098510 Medicago truncatula HOM05D007134 ORTHO05D009004 1.7e-89 333.6 234 69.7
AUR62018733 Chenopodium quinoa HOM05D007134 ORTHO05D009004 4.2e-88 328.9 312 52.6
Pp3c2_15970 Physcomitrium patens HOM05D007134 ORTHO05D009004 9.7e-77 291.2 292 47.3
AagrBONN_evm.TU.Sc2ySwM_117.2263 Anthoceros agrestis HOM05D007134 ORTHO05D009004 2.2e-76 290.0 300 47.0
VMungo0251G0669 Vigna mungo HOM05D007134 ORTHO05D009004 5.0e-73 278.9 200 66.5
QL12p006104 Quercus lobata HOM05D007134 ORTHO05D009004 9.4e-72 274.6 151 87.4
Pp3c1_31250 Physcomitrium patens HOM05D007134 ORTHO05D009004 5.7e-69 265.4 302 43.7
Pp3c2_10940 Physcomitrium patens HOM05D007134 ORTHO05D009004 1.3e-60 237.7 295 43.7
Pp3c17_17110 Physcomitrium patens HOM05D007134 ORTHO05D009004 2.9e-52 209.9 256 42.2
VMungo0251G0585 Vigna mungo HOM05D007134 ORTHO05D009004 9.5e-48 194.9 136 69.1
Cpa.g.sc71.65 Carica papaya HOM05D007134 ORTHO05D009004 2.1e-39 167.2 87 79.3
SEGI_12545 Sequoiadendron giganteum HOM05D007134 ORTHO05D009004 3.2e-35 153.3 130 57.7
Nn6g33134 Nelumbo nucifera HOM05D007134 ORTHO05D009004 2.0e-13 80.9 70 58.6


User provided reference genes

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