Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G090800 Carya illinoinensis HOM05D006861 ORTHO05D008620 1.1e-133 479.9 238 100.0
Haze_08270 Corylus avellana HOM05D006861 ORTHO05D008620 1.4e-99 366.7 248 77.0
Cfa012408 Carpinus fangiana HOM05D006861 ORTHO05D008620 7.4e-98 360.9 249 75.1
QL12p006269 Quercus lobata HOM05D006861 ORTHO05D008620 1.0e-94 350.5 236 74.2
QL12p006401 Quercus lobata HOM05D006861 ORTHO05D008620 8.2e-89 330.9 285 61.4
Potri.003G089400 Populus trichocarpa HOM05D006861 ORTHO05D008620 1.8e-88 329.7 238 70.6
arahy.Tifrunner.gnm1.ann1.A00F14 Arachis hypogaea HOM05D006861 ORTHO05D008620 1.6e-87 326.6 228 72.4
CANSAT21G0325 Cannabis sativa HOM05D006861 ORTHO05D008620 2.0e-87 326.2 241 68.0
GSVIVG01013176001 Vitis vinifera HOM05D006861 ORTHO05D008620 1.0e-86 323.9 213 74.2
arahy.Tifrunner.gnm1.ann1.P9U8RJ Arachis hypogaea HOM05D006861 ORTHO05D008620 1.3e-86 323.6 228 71.1
FvH4_5g21620 Fragaria vesca HOM05D006861 ORTHO05D008620 2.2e-86 322.8 215 72.6
FAN18G0349 Fragaria x ananassa HOM05D006861 ORTHO05D008620 1.5e-85 320.1 212 72.6
Prupe.5G041200 Prunus persica HOM05D006861 ORTHO05D008620 1.9e-85 319.7 241 66.8
RcHm_v2.0_Chr7g0209081 Rosa chinensis HOM05D006861 ORTHO05D008620 3.2e-85 318.9 238 67.2
Sabra03G0059200 Salix brachista HOM05D006861 ORTHO05D008620 3.2e-85 318.9 238 68.1
Dinv28930 Davidia involucrata HOM05D006861 ORTHO05D008620 7.2e-85 317.8 227 70.0
Glyma.05G113600 Glycine max HOM05D006861 ORTHO05D008620 7.2e-85 317.8 217 71.9
Medtr4g098640 Medicago truncatula HOM05D006861 ORTHO05D008620 7.2e-85 317.8 218 72.0
Lj4g0014575 Lotus japonicus HOM05D006861 ORTHO05D008620 1.2e-84 317.0 218 71.6
Psat4g079280 Pisum sativum HOM05D006861 ORTHO05D008620 1.2e-84 317.0 218 72.5
MD06G1031100 Malus domestica HOM05D006861 ORTHO05D008620 2.1e-84 316.2 213 73.7
Manes.17G013800 Manihot esculenta HOM05D006861 ORTHO05D008620 2.1e-84 316.2 225 72.0
TPR.G28655 Trifolium pratense HOM05D006861 ORTHO05D008620 3.6e-84 315.5 218 72.9
Thecc.03G231500 Theobroma cacao HOM05D006861 ORTHO05D008620 4.7e-84 315.1 212 71.7
VMungo0251G0361 Vigna mungo HOM05D006861 ORTHO05D008620 4.7e-84 315.1 218 71.1
FAN04G0264 Fragaria x ananassa HOM05D006861 ORTHO05D008620 8.0e-84 314.3 221 70.1
Actinidia14818 Actinidia chinensis HOM05D006861 ORTHO05D008620 1.4e-83 313.5 218 69.7
Glyma.17G153700 Glycine max HOM05D006861 ORTHO05D008620 1.4e-83 313.5 217 71.4
FAN08G0129 Fragaria x ananassa HOM05D006861 ORTHO05D008620 1.2e-82 310.5 238 67.2
CSS0041220 Camellia sinensis var. sinensis HOM05D006861 ORTHO05D008620 2.6e-82 309.3 224 68.3
Hma1.2p1_0585F.1_g183570 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 2.6e-82 309.3 214 71.0
Ca_22062_v3 Cicer arietinum L. HOM05D006861 ORTHO05D008620 3.3e-82 308.9 218 69.7
CSS0014670 Camellia sinensis var. sinensis HOM05D006861 ORTHO05D008620 7.5e-82 307.8 224 67.9
EL10Ac5g12163 Beta vulgaris HOM05D006861 ORTHO05D008620 1.3e-81 307.0 216 71.8
FAN13G1018 Fragaria x ananassa HOM05D006861 ORTHO05D008620 2.8e-81 305.8 212 70.8
Ah.12g054700 Amaranthus hybridus HOM05D006861 ORTHO05D008620 8.2e-81 304.3 216 69.4
Lalb_Chr09g0329521 Lupinus albus HOM05D006861 ORTHO05D008620 8.2e-81 304.3 213 70.0
TAR629G3318 Trochodendron aralioides HOM05D006861 ORTHO05D008620 8.2e-81 304.3 218 71.1
DCAR_008287 Daucus carota HOM05D006861 ORTHO05D008620 1.1e-80 303.9 213 68.1
Aqoxy3G02463 Aquilegia oxysepala HOM05D006861 ORTHO05D008620 3.1e-80 302.4 213 70.0
AUR62007255 Chenopodium quinoa HOM05D006861 ORTHO05D008620 4.1e-80 302.0 210 70.0
Duzib068G0493 Durio zibethinus HOM05D006861 ORTHO05D008620 5.3e-80 301.6 213 68.5
Rhsim07G0124500 Rhododendron simsii HOM05D006861 ORTHO05D008620 5.3e-80 301.6 218 68.3
Gohir.D03G170200 Gossypium hirsutum HOM05D006861 ORTHO05D008620 9.1e-80 300.8 217 67.3
Gorai.003G180500 Gossypium raimondii HOM05D006861 ORTHO05D008620 1.2e-79 300.4 217 67.3
Gohir.A12G209800 Gossypium hirsutum HOM05D006861 ORTHO05D008620 1.6e-79 300.1 226 66.8
THA.LOC104807964 Tarenaya hassleriana HOM05D006861 ORTHO05D008620 2.0e-79 299.7 226 64.2
CsaV3_3G001910 Cucumis sativus L. HOM05D006861 ORTHO05D008620 2.7e-79 299.3 247 63.2
Lsat_1_v5_gn_8_112001 Lactuca sativa HOM05D006861 ORTHO05D008620 3.5e-79 298.9 217 66.4
MELO3C013865.2 Cucumis melo HOM05D006861 ORTHO05D008620 4.5e-79 298.5 239 64.9
Eucgr.D02180 Eucalyptus grandis HOM05D006861 ORTHO05D008620 4.5e-79 298.5 213 70.4
MSTRG.12154 Avicennia marina HOM05D006861 ORTHO05D008620 2.2e-78 296.2 218 64.2
Duzib205G0961 Durio zibethinus HOM05D006861 ORTHO05D008620 2.9e-78 295.8 226 65.0
Gohir.A03G002100 Gossypium hirsutum HOM05D006861 ORTHO05D008620 3.8e-78 295.4 217 66.4
Gohir.D12G212500 Gossypium hirsutum HOM05D006861 ORTHO05D008620 1.1e-77 293.9 226 65.5
ClCG10G001830 Citrullus lanatus HOM05D006861 ORTHO05D008620 5.5e-77 291.6 247 61.9
Cc08_g02400 Coffea canephora HOM05D006861 ORTHO05D008620 7.2e-77 291.2 238 64.7
PSO782G3300 Papaver somniferum HOM05D006861 ORTHO05D008620 2.7e-76 289.3 213 68.1
Migut.A01006 Erythranthe guttata HOM05D006861 ORTHO05D008620 8.0e-76 287.7 213 63.8
PSO063G6338 Papaver somniferum HOM05D006861 ORTHO05D008620 1.0e-75 287.3 213 67.6
HanXRQChr16g0511531 Helianthus annuus HOM05D006861 ORTHO05D008620 1.4e-75 287.0 213 65.3
Sc07g0008780 Simmondsia chinensis HOM05D006861 ORTHO05D008620 1.4e-75 287.0 223 63.7
Gorai.008G228100 Gossypium raimondii HOM05D006861 ORTHO05D008620 3.0e-75 285.8 237 62.9
ECA233G2855 Erigeron canadensis HOM05D006861 ORTHO05D008620 6.8e-75 284.6 222 63.1
ATR0049G013 Amborella trichopoda HOM05D006861 ORTHO05D008620 5.7e-74 281.6 213 61.5
Sed0027053 Sechium edule HOM05D006861 ORTHO05D008620 5.7e-74 281.6 217 64.5
Nitab4.5_0000535g0140 Nicotiana tabacum HOM05D006861 ORTHO05D008620 9.8e-74 280.8 224 59.8
Aa31LG9G15370 Aethionema arabicum HOM05D006861 ORTHO05D008620 1.3e-73 280.4 217 65.0
Nn6g33632 Nelumbo nucifera HOM05D006861 ORTHO05D008620 2.2e-73 279.6 282 53.9
Ciclev10032685m.g Citrus clementina HOM05D006861 ORTHO05D008620 2.8e-73 279.3 225 63.1
SalBow6G5529 Salvia bowleyana HOM05D006861 ORTHO05D008620 2.8e-73 279.3 218 62.4
COL.COLO4_17076 Corchorus olitorius HOM05D006861 ORTHO05D008620 4.8e-73 278.5 213 64.8
Nitab4.5_0007026g0050 Nicotiana tabacum HOM05D006861 ORTHO05D008620 1.1e-72 277.3 236 58.1
SGA_v2.0_scaffold198G41105 Striga asiatica HOM05D006861 ORTHO05D008620 4.1e-72 275.4 218 61.9
Carub.0004s1705 Capsella rubella HOM05D006861 ORTHO05D008620 5.9e-71 271.6 217 63.6
vmacro14159 Vaccinium macrocarpon HOM05D006861 ORTHO05D008620 1.7e-70 270.0 208 65.4
A05p10410 Brassica napus HOM05D006861 ORTHO05D008620 8.6e-70 267.7 218 61.0
AT2G35360 Arabidopsis thaliana HOM05D006861 ORTHO05D008620 1.9e-69 266.5 217 62.7
AL4G31410 Arabidopsis lyrata HOM05D006861 ORTHO05D008620 3.3e-69 265.8 217 61.3
PGSC0003DMG400020500 Solanum tuberosum HOM05D006861 ORTHO05D008620 4.2e-69 265.4 219 57.5
HPP92_028475 Vanilla planifolia HOM05D006861 ORTHO05D008620 1.6e-68 263.5 214 60.3
HPP92_027725 Vanilla planifolia HOM05D006861 ORTHO05D008620 2.8e-68 262.7 214 60.3
AUR62018744 Chenopodium quinoa HOM05D006861 ORTHO05D008620 3.6e-68 262.3 226 60.2
CAN.G845.34 Capsicum annuum HOM05D006861 ORTHO05D008620 6.1e-68 261.5 218 57.8
CARHR129520 Cardamine hirsuta HOM05D006861 ORTHO05D008620 8.0e-68 261.2 221 61.1
BcaB02g09437 Brassica carinata HOM05D006861 ORTHO05D008620 1.0e-67 260.8 218 60.6
BcaC02g11640 Brassica carinata HOM05D006861 ORTHO05D008620 1.4e-67 260.4 218 60.1
C04p12840 Brassica napus HOM05D006861 ORTHO05D008620 1.4e-67 260.4 218 60.1
BolC4t22928H Brassica oleracea HOM05D006861 ORTHO05D008620 1.4e-67 260.4 218 60.1
BraA05t19976Z Brassica rapa HOM05D006861 ORTHO05D008620 1.4e-67 260.4 218 60.1
Peaxi162Scf00102g00630 Petunia axillaris HOM05D006861 ORTHO05D008620 1.4e-67 260.4 218 57.8
TWI60G1564 Tripterygium wilfordii HOM05D006861 ORTHO05D008620 1.4e-67 260.4 238 60.1
Sp4g17580 Schrenkiella parvula HOM05D006861 ORTHO05D008620 1.8e-67 260.0 217 60.8
Solyc08g007030.3 Solanum lycopersicum HOM05D006861 ORTHO05D008620 6.8e-67 258.1 219 56.2
Thhalv10017211m.g Eutrema salsugineum HOM05D006861 ORTHO05D008620 8.9e-67 257.7 217 60.4
Sopen08g002990 Solanum pennellii HOM05D006861 ORTHO05D008620 3.4e-66 255.8 219 55.7
Zm00001eb307090 Zea mays HOM05D006861 ORTHO05D008620 3.7e-65 252.3 221 57.5
Os09g0573100 Oryza sativa ssp. japonica HOM05D006861 ORTHO05D008620 4.5e-63 245.4 222 58.1
Phvul.003G229300 Phaseolus vulgaris HOM05D006861 ORTHO05D008620 8.6e-62 241.1 158 74.1
CDE12G0071 Ceratophyllum demersum HOM05D006861 ORTHO05D008620 1.9e-61 240.0 193 61.1
Hma1.2p1_0585F.1_g183580 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 7.3e-61 238.0 213 59.2
Cpa.g.sc90.59 Carica papaya HOM05D006861 ORTHO05D008620 6.1e-60 235.0 145 77.2
SEGI_11276 Sequoiadendron giganteum HOM05D006861 ORTHO05D008620 3.4e-58 229.2 211 52.6
Lj2A243G18 Lonicera japonica HOM05D006861 ORTHO05D008620 1.9e-56 223.4 145 71.7
Gohir.A09G039700 Gossypium hirsutum HOM05D006861 ORTHO05D008620 2.7e-55 219.5 151 71.5
Dinv25198 Davidia involucrata HOM05D006861 ORTHO05D008620 6.0e-55 218.4 142 73.2
Actinidia09224 Actinidia chinensis HOM05D006861 ORTHO05D008620 3.3e-53 212.6 139 70.5
Pp3c1_27050 Physcomitrium patens HOM05D006861 ORTHO05D008620 2.0e-50 203.4 215 51.2
Hma1.2p1_2232F.1_g317620 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 5.1e-46 188.7 211 48.3
HanXRQChr16g0517491 Helianthus annuus HOM05D006861 ORTHO05D008620 3.7e-41 172.6 117 67.5
Atru.BG.44.p Acer truncatum HOM05D006861 ORTHO05D008620 4.6e-39 165.6 115 67.8
CBR_g57857 Chara braunii HOM05D006861 ORTHO05D008620 3.9e-30 136.0 191 41.4
Cre12.g533400 Chlamydomonas reinhardtii HOM05D006861 ORTHO05D008620 8.7e-14 81.6 181 31.5
PRCOL_00000188 Prasinoderma coloniale HOM05D006861 ORTHO05D008620 4.8e-12 75.9 120 35.8
Gohir.A01G114301 Gossypium hirsutum HOM05D006861 ORTHO05D008620 2.0e-10 70.5 62 58.1


User provided reference genes

Program Settings