Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G085600 Carya illinoinensis HOM05D006116 ORTHO05D007795 1.6e-239 832.4 441 100.0
Prupe.5G050800 Prunus persica HOM05D006116 ORTHO05D007795 3.4e-181 638.6 438 70.8
vmacro00376 Vaccinium macrocarpon HOM05D006116 ORTHO05D007795 1.3e-180 636.7 440 70.9
QL12p007972 Quercus lobata HOM05D006116 ORTHO05D007795 2.5e-179 632.5 456 76.8
Rhsim11G0056500 Rhododendron simsii HOM05D006116 ORTHO05D007795 2.5e-179 632.5 439 68.8
COL.COLO4_06703 Corchorus olitorius HOM05D006116 ORTHO05D007795 4.6e-178 628.2 446 69.3
CSS0034154 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 6.7e-177 624.4 443 69.1
GSVIVG01013271001 Vitis vinifera HOM05D006116 ORTHO05D007795 8.7e-177 624.0 446 76.9
Hma1.2p1_0414F.1_g147510 Hydrangea macrophylla HOM05D006116 ORTHO05D007795 3.3e-176 622.1 440 73.6
CSS0043999 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 5.6e-176 621.3 443 68.8
Duzib205G0680 Durio zibethinus HOM05D006116 ORTHO05D007795 2.8e-175 619.0 442 75.8
MD04G1057000 Malus domestica HOM05D006116 ORTHO05D007795 3.7e-175 618.6 442 69.5
Actinidia03408 Actinidia chinensis HOM05D006116 ORTHO05D007795 1.0e-172 610.5 439 70.4
Thecc.03G237000 Theobroma cacao HOM05D006116 ORTHO05D007795 1.9e-171 606.3 444 74.5
PGR042G3339 Punica granatum HOM05D006116 ORTHO05D007795 3.5e-170 602.1 453 65.3
FAN18G3779 Fragaria x ananassa HOM05D006116 ORTHO05D007795 3.9e-169 598.6 440 65.9
RcHm_v2.0_Chr7g0207741 Rosa chinensis HOM05D006116 ORTHO05D007795 6.7e-169 597.8 442 73.1
ClCG10G002040 Citrullus lanatus HOM05D006116 ORTHO05D007795 1.5e-168 596.7 439 72.2
FvH4_5g20810 Fragaria vesca HOM05D006116 ORTHO05D007795 3.3e-168 595.5 440 65.5
MELO3C013885.2 Cucumis melo HOM05D006116 ORTHO05D007795 8.2e-167 590.9 445 71.5
FAN08G3374 Fragaria x ananassa HOM05D006116 ORTHO05D007795 1.4e-166 590.1 440 65.5
FAN04G0705 Fragaria x ananassa HOM05D006116 ORTHO05D007795 2.4e-166 589.3 440 65.2
Ciclev10020221m.g Citrus clementina HOM05D006116 ORTHO05D007795 4.1e-166 588.6 440 66.4
CsaV3_3G002130 Cucumis sativus L. HOM05D006116 ORTHO05D007795 6.9e-166 587.8 442 71.5
Eucgr.E00329 Eucalyptus grandis HOM05D006116 ORTHO05D007795 7.7e-165 584.3 454 70.3
CANSAT21G1244 Cannabis sativa HOM05D006116 ORTHO05D007795 2.2e-164 582.8 467 69.4
Nn1g00701 Nelumbo nucifera HOM05D006116 ORTHO05D007795 3.8e-164 582.0 443 69.5
Nitab4.5_0006135g0020 Nicotiana tabacum HOM05D006116 ORTHO05D007795 3.8e-164 582.0 441 64.4
Potri.003G085600 Populus trichocarpa HOM05D006116 ORTHO05D007795 3.8e-164 582.0 440 72.0
Nitab4.5_0001255g0040 Nicotiana tabacum HOM05D006116 ORTHO05D007795 1.0e-161 573.9 447 63.1
Gorai.008G230000 Gossypium raimondii HOM05D006116 ORTHO05D007795 3.0e-161 572.4 490 59.8
TWI60G0034 Tripterygium wilfordii HOM05D006116 ORTHO05D007795 6.7e-161 571.2 439 72.0
Gohir.A12G211900 Gossypium hirsutum HOM05D006116 ORTHO05D007795 2.8e-159 565.8 488 59.2
Oeu020145.1 Olea europaea HOM05D006116 ORTHO05D007795 2.8e-159 565.8 441 63.7
Cc08_g01540 Coffea canephora HOM05D006116 ORTHO05D007795 6.3e-159 564.7 448 66.3
PGSC0003DMG400001856 Solanum tuberosum HOM05D006116 ORTHO05D007795 3.4e-157 558.9 441 62.8
CAN.G1445.8 Capsicum annuum HOM05D006116 ORTHO05D007795 4.5e-157 558.5 442 63.6
Lalb_Chr05g0220761 Lupinus albus HOM05D006116 ORTHO05D007795 7.7e-157 557.8 446 64.8
THA.LOC104813328 Tarenaya hassleriana HOM05D006116 ORTHO05D007795 3.8e-156 555.4 447 62.9
ECA240G2524 Erigeron canadensis HOM05D006116 ORTHO05D007795 5.0e-156 555.1 441 63.0
Sopen08g026090 Solanum pennellii HOM05D006116 ORTHO05D007795 5.5e-155 551.6 441 62.6
DCAR_008310 Daucus carota HOM05D006116 ORTHO05D007795 1.2e-154 550.4 458 66.2
Solyc08g077510.4 Solanum lycopersicum HOM05D006116 ORTHO05D007795 1.8e-153 546.6 441 62.1
Aqoxy7G00869 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 6.7e-153 544.7 454 66.5
Glyma.17G150200 Glycine max HOM05D006116 ORTHO05D007795 4.4e-152 542.0 451 62.7
ClCG00G004790 Citrullus lanatus HOM05D006116 ORTHO05D007795 1.4e-150 537.0 439 67.7
Sed0023369 Sechium edule HOM05D006116 ORTHO05D007795 2.4e-150 536.2 442 70.4
arahy.Tifrunner.gnm1.ann1.F87Z6X Arachis hypogaea HOM05D006116 ORTHO05D007795 7.0e-150 534.6 450 60.7
arahy.Tifrunner.gnm1.ann1.L13TYF Arachis hypogaea HOM05D006116 ORTHO05D007795 2.0e-149 533.1 450 60.4
Peaxi162Scf00084g00117 Petunia axillaris HOM05D006116 ORTHO05D007795 2.6e-149 532.7 441 61.5
PSO732G0356 Papaver somniferum HOM05D006116 ORTHO05D007795 5.9e-149 531.6 451 61.4
HanXRQChr03g0087311 Helianthus annuus HOM05D006116 ORTHO05D007795 1.0e-148 530.8 442 61.3
Gohir.D12G214400 Gossypium hirsutum HOM05D006116 ORTHO05D007795 1.3e-148 530.4 304 81.9
BolC7t45369H Brassica oleracea HOM05D006116 ORTHO05D007795 5.0e-148 528.5 456 60.5
Lj4g0012718 Lotus japonicus HOM05D006116 ORTHO05D007795 5.0e-148 528.5 442 62.2
BraA03t14121Z Brassica rapa HOM05D006116 ORTHO05D007795 1.9e-147 526.6 442 66.7
VMungo0251G0386 Vigna mungo HOM05D006116 ORTHO05D007795 2.5e-147 526.2 449 65.0
C07p48610 Brassica napus HOM05D006116 ORTHO05D007795 3.2e-147 525.8 456 60.3
A03p50320 Brassica napus HOM05D006116 ORTHO05D007795 4.2e-147 525.4 442 66.7
Medtr4g099100 Medicago truncatula HOM05D006116 ORTHO05D007795 4.2e-147 525.4 449 63.7
Sc07g0009020 Simmondsia chinensis HOM05D006116 ORTHO05D007795 1.2e-146 523.9 450 62.4
TPR.G11192 Trifolium pratense HOM05D006116 ORTHO05D007795 1.6e-146 523.5 454 63.2
Ca_22031_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 6.1e-146 521.5 441 62.1
CARHR223700 Cardamine hirsuta HOM05D006116 ORTHO05D007795 1.8e-145 520.0 441 64.9
PSO675G1792 Papaver somniferum HOM05D006116 ORTHO05D007795 1.8e-145 520.0 454 60.4
Aa31LG2G13210 Aethionema arabicum HOM05D006116 ORTHO05D007795 8.8e-145 517.7 415 63.9
MSTRG.1960 Avicennia marina HOM05D006116 ORTHO05D007795 8.8e-145 517.7 442 64.0
Manes.17G019700 Manihot esculenta HOM05D006116 ORTHO05D007795 1.1e-144 517.3 443 59.8
Hund14464 Selenicereus undatus HOM05D006116 ORTHO05D007795 3.3e-144 515.8 447 58.2
Phvul.003G227000 Phaseolus vulgaris HOM05D006116 ORTHO05D007795 9.7e-144 514.2 442 60.2
Ah.12g053810 Amaranthus hybridus HOM05D006116 ORTHO05D007795 1.7e-143 513.5 457 58.2
Sp7g17070 Schrenkiella parvula HOM05D006116 ORTHO05D007795 4.8e-143 511.9 442 65.6
Lj8A287G22 Lonicera japonica HOM05D006116 ORTHO05D007795 1.8e-142 510.0 428 61.0
AL7G37600 Arabidopsis lyrata HOM05D006116 ORTHO05D007795 5.3e-142 508.4 442 63.8
Migut.E00901 Erythranthe guttata HOM05D006116 ORTHO05D007795 5.3e-142 508.4 304 77.0
SGA_v2.0_scaffold20G09247 Striga asiatica HOM05D006116 ORTHO05D007795 2.6e-141 506.1 478 57.7
Thhalv10025290m.g Eutrema salsugineum HOM05D006116 ORTHO05D007795 5.9e-141 505.0 440 63.0
Lsat_1_v5_gn_6_88480 Lactuca sativa HOM05D006116 ORTHO05D007795 7.7e-141 504.6 449 59.2
Lalb_Chr09g0329681 Lupinus albus HOM05D006116 ORTHO05D007795 9.4e-139 497.7 304 78.0
Carub.0007s2428 Capsella rubella HOM05D006116 ORTHO05D007795 1.8e-137 493.4 302 76.8
TAR375G0725 Trochodendron aralioides HOM05D006116 ORTHO05D007795 2.3e-137 493.0 385 70.9
unitig_21.g20374 Utricularia gibba HOM05D006116 ORTHO05D007795 4.4e-136 488.8 438 56.8
AUR62007200 Chenopodium quinoa HOM05D006116 ORTHO05D007795 1.3e-135 487.3 303 73.6
AUR62018802 Chenopodium quinoa HOM05D006116 ORTHO05D007795 2.2e-135 486.5 413 63.7
EL10Ac5g12218 Beta vulgaris HOM05D006116 ORTHO05D007795 1.2e-133 480.7 509 50.7
ATR0829G115 Amborella trichopoda HOM05D006116 ORTHO05D007795 2.7e-133 479.6 451 56.1
Os04g0542900 Oryza sativa ssp. japonica HOM05D006116 ORTHO05D007795 5.9e-133 478.4 465 56.8
TAR375G0708 Trochodendron aralioides HOM05D006116 ORTHO05D007795 1.0e-129 467.6 369 70.5
Zm00001eb075030 Zea mays HOM05D006116 ORTHO05D007795 1.4e-129 467.2 491 51.7
Haze_08334 Corylus avellana HOM05D006116 ORTHO05D007795 4.8e-127 458.8 348 76.7
SEGI_40490 Sequoiadendron giganteum HOM05D006116 ORTHO05D007795 4.0e-121 439.1 292 70.9
CiPaw.12G058000 Carya illinoinensis HOM05D006116 ORTHO05D007795 4.9e-119 432.2 232 87.9
HPP92_020688 Vanilla planifolia HOM05D006116 ORTHO05D007795 1.1e-118 431.0 278 71.6
Pp3c14_16100 Physcomitrium patens HOM05D006116 ORTHO05D007795 8.3e-111 404.8 301 62.8
Pp3c14_16101 Physcomitrium patens HOM05D006116 ORTHO05D007795 8.3e-111 404.8 301 62.8
AagrBONN_evm.TU.Sc2ySwM_368.518 Anthoceros agrestis HOM05D006116 ORTHO05D007795 7.3e-107 391.7 456 46.1
FAN13G0371 Fragaria x ananassa HOM05D006116 ORTHO05D007795 1.2e-106 391.0 337 57.9
Mapoly0141s0023 Marchantia polymorpha HOM05D006116 ORTHO05D007795 1.2e-106 391.0 301 61.5
Migut.E00812 Erythranthe guttata HOM05D006116 ORTHO05D007795 4.0e-105 386.0 218 81.7
Pp3c2_10960 Physcomitrium patens HOM05D006116 ORTHO05D007795 5.2e-105 385.6 301 61.1
SMO356G0030 Selaginella moellendorffii HOM05D006116 ORTHO05D007795 3.4e-104 382.9 301 61.1
Psat4g077320 Pisum sativum HOM05D006116 ORTHO05D007795 1.4e-102 377.5 380 55.0
BcaC06g33529 Brassica carinata HOM05D006116 ORTHO05D007795 1.9e-102 377.1 357 62.5
Zm00001eb313880 Zea mays HOM05D006116 ORTHO05D007795 2.4e-102 376.7 268 64.9
Zm00001eb091650 Zea mays HOM05D006116 ORTHO05D007795 4.4e-96 355.9 307 55.4
Zm00001eb319310 Zea mays HOM05D006116 ORTHO05D007795 6.6e-84 315.5 201 72.6
CBR_g27781 Chara braunii HOM05D006116 ORTHO05D007795 1.1e-70 271.6 265 47.9
Zm00001eb129530 Zea mays HOM05D006116 ORTHO05D007795 3.2e-70 270.0 208 59.6
Zm00001eb391960 Zea mays HOM05D006116 ORTHO05D007795 3.2e-70 270.0 208 59.6
Dinv28896 Davidia involucrata HOM05D006116 ORTHO05D007795 1.4e-65 254.6 151 79.5
Cre14.g631900 Chlamydomonas reinhardtii HOM05D006116 ORTHO05D007795 1.2e-64 251.5 278 42.1
Atru.chr9.1147 Acer truncatum HOM05D006116 ORTHO05D007795 1.4e-57 228.0 118 87.3
PSO732G0385 Papaver somniferum HOM05D006116 ORTHO05D007795 1.1e-49 201.8 258 49.2
Zm00001eb268110 Zea mays HOM05D006116 ORTHO05D007795 2.5e-46 190.7 198 48.0
Zm00001eb276710 Zea mays HOM05D006116 ORTHO05D007795 6.1e-37 159.5 134 54.5
Ca_20974_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 2.2e-34 151.0 116 62.1
TAR375G0859 Trochodendron aralioides HOM05D006116 ORTHO05D007795 7.7e-32 142.5 70 94.3
EL10Ac5g12217 Beta vulgaris HOM05D006116 ORTHO05D007795 3.0e-28 130.6 78 74.4
Lsat_1_v5_gn_7_9401 Lactuca sativa HOM05D006116 ORTHO05D000290 3.1e-25 120.6 101 51.5
DCAR_005654 Daucus carota HOM05D006116 ORTHO05D007795 3.8e-23 113.6 68 75.0
CiPaw.12G058200 Carya illinoinensis HOM05D006116 ORTHO05D007795 6.5e-23 112.8 88 64.8
CAN.G507.3 Capsicum annuum HOM05D006116 ORTHO05D007795 3.6e-21 107.1 76 63.2
CDE11G0087 Ceratophyllum demersum HOM05D006116 ORTHO05D007795 1.1e-17 95.5 53 79.2
TAR375G0706 Trochodendron aralioides HOM05D006116 ORTHO05D009946 1.7e-15 88.2 62 62.9
Atru.chr9.1146 Acer truncatum HOM05D006116 ORTHO05D007795 2.1e-13 81.3 95 47.4
Aqoxy6G01690 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 7.5e-11 72.8 120 30.8
Aqoxy7G03532 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 1.0e-07 62.4 59 45.8


User provided reference genes

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