Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G084400 Carya illinoinensis HOM05D006103 ORTHO05D007468 1.1e-163 580.1 326 100.0
Haze_08348 Corylus avellana HOM05D006103 ORTHO05D007468 2.1e-135 486.1 326 85.6
QL12p008443 Quercus lobata HOM05D006103 ORTHO05D007468 6.1e-119 431.4 326 75.8
Prupe.5G053300 Prunus persica HOM05D006103 ORTHO05D007468 5.7e-117 424.9 337 72.4
MD04G1054200 Malus domestica HOM05D006103 ORTHO05D007468 6.8e-110 401.4 350 68.0
CsaV3_3G002190 Cucumis sativus L. HOM05D006103 ORTHO05D007468 2.6e-109 399.4 333 72.1
FAN08G0488 Fragaria x ananassa HOM05D006103 ORTHO05D007468 3.4e-109 399.1 325 71.7
RcHm_v2.0_Chr7g0206421 Rosa chinensis HOM05D006103 ORTHO05D007468 5.7e-109 398.3 334 69.8
ClCG10G002100 Citrullus lanatus HOM05D006103 ORTHO05D007468 1.3e-108 397.1 330 71.8
FvH4_5g20690 Fragaria vesca HOM05D006103 ORTHO05D007468 1.3e-108 397.1 326 72.4
FAN18G2558 Fragaria x ananassa HOM05D006103 ORTHO05D007468 2.2e-108 396.4 329 72.0
Thecc.03G237900 Theobroma cacao HOM05D006103 ORTHO05D007468 1.1e-107 394.0 322 72.7
TAR375G0262 Trochodendron aralioides HOM05D006103 ORTHO05D007468 1.1e-107 394.0 325 71.7
Duzib205G0801 Durio zibethinus HOM05D006103 ORTHO05D007468 1.6e-106 390.2 325 69.8
CANSAT21G0053 Cannabis sativa HOM05D006103 ORTHO05D007468 2.0e-106 389.8 318 72.0
MELO3C013891.2 Cucumis melo HOM05D006103 ORTHO05D007468 3.5e-106 389.0 340 70.0
FAN04G1103 Fragaria x ananassa HOM05D006103 ORTHO05D007468 3.5e-106 389.0 334 65.6
PGR042G3635 Punica granatum HOM05D006103 ORTHO05D007468 6.0e-106 388.3 325 68.0
FAN13G0941 Fragaria x ananassa HOM05D006103 ORTHO05D007468 7.8e-106 387.9 325 70.5
Atru.chr9.1156 Acer truncatum HOM05D006103 ORTHO05D007468 1.0e-105 387.5 325 65.5
Gohir.D08G182200 Gossypium hirsutum HOM05D006103 ORTHO05D007468 1.3e-105 387.1 325 69.2
Gorai.004G191100 Gossypium raimondii HOM05D006103 ORTHO05D007468 2.3e-105 386.3 325 69.2
CSS0016826 Camellia sinensis var. sinensis HOM05D006103 ORTHO05D007468 1.1e-104 384.0 323 69.0
Dinv25153 Davidia involucrata HOM05D006103 ORTHO05D007468 1.5e-104 383.6 318 69.5
Eucgr.E00334 Eucalyptus grandis HOM05D006103 ORTHO05D007468 2.5e-104 382.9 341 67.7
Gohir.A08G162200 Gossypium hirsutum HOM05D006103 ORTHO05D007468 2.1e-103 379.8 325 68.3
arahy.Tifrunner.gnm1.ann1.GKQN4T Arachis hypogaea HOM05D006103 ORTHO05D007468 3.6e-103 379.0 327 67.6
Ciclev10021261m.g Citrus clementina HOM05D006103 ORTHO05D007468 3.6e-103 379.0 325 67.7
Potri.001G149800 Populus trichocarpa HOM05D006103 ORTHO05D007468 1.8e-102 376.7 319 67.1
Sed0003222 Sechium edule HOM05D006103 ORTHO05D007468 2.3e-102 376.3 329 69.6
Actinidia03414 Actinidia chinensis HOM05D006103 ORTHO05D007468 3.1e-102 375.9 319 67.1
CSS0027189 Camellia sinensis var. sinensis HOM05D006103 ORTHO05D007468 8.9e-102 374.4 323 67.5
Sabra01G0119800 Salix brachista HOM05D006103 ORTHO05D007468 2.0e-101 373.2 323 67.2
Phvul.003G226000 Phaseolus vulgaris HOM05D006103 ORTHO05D007468 3.4e-101 372.5 325 69.8
VMungo0251G0880 Vigna mungo HOM05D006103 ORTHO05D007468 7.5e-101 371.3 325 69.5
Glyma.05G067000 Glycine max HOM05D006103 ORTHO05D007468 8.3e-100 367.9 325 65.8
Manes.17G024600 Manihot esculenta HOM05D006103 ORTHO05D007468 1.6e-98 363.6 324 65.4
MBI04_g46823_MAGBIO Magnolia biondii HOM05D006103 ORTHO05D007468 4.6e-98 362.1 322 62.7
Aqoxy3G02600 Aquilegia oxysepala HOM05D006103 ORTHO05D007468 2.3e-97 359.8 324 65.7
Lalb_Chr16g0386381 Lupinus albus HOM05D006103 ORTHO05D007468 2.3e-97 359.8 326 66.6
Cc08_g11160 Coffea canephora HOM05D006103 ORTHO05D007468 5.0e-97 358.6 316 65.5
PSO063G5173 Papaver somniferum HOM05D006103 ORTHO05D007468 1.1e-96 357.5 326 66.0
CAN.G422.12 Capsicum annuum HOM05D006103 ORTHO05D007468 1.9e-96 356.7 325 65.2
TWI60G1123 Tripterygium wilfordii HOM05D006103 ORTHO05D007468 3.3e-96 355.9 325 61.5
Cpa.g.sc98.70 Carica papaya HOM05D006103 ORTHO05D007468 4.3e-96 355.5 327 59.0
Nitab4.5_0000506g0180 Nicotiana tabacum HOM05D006103 ORTHO05D007468 5.6e-96 355.1 324 65.4
Oeu054287.1 Olea europaea HOM05D006103 ORTHO05D007468 1.2e-95 354.0 325 64.0
Lj4g0004061 Lotus japonicus HOM05D006103 ORTHO05D007468 1.6e-95 353.6 327 66.1
Lj8A286T53 Lonicera japonica HOM05D006103 ORTHO05D007468 1.8e-94 350.1 320 60.6
DCAR_004514 Daucus carota HOM05D006103 ORTHO05D007468 4.4e-93 345.5 325 64.0
Lsat_1_v5_gn_6_94780 Lactuca sativa HOM05D006103 ORTHO05D007468 7.5e-93 344.7 318 63.2
MSTRG.13771 Avicennia marina HOM05D006103 ORTHO05D007468 1.7e-92 343.6 324 61.7
Solyc06g060990.4 Solanum lycopersicum HOM05D006103 ORTHO05D007468 2.9e-92 342.8 328 63.7
Ca_22022_v3 Cicer arietinum L. HOM05D006103 ORTHO05D007468 4.9e-92 342.0 325 57.5
Sopen06g021130 Solanum pennellii HOM05D006103 ORTHO05D007468 8.3e-92 341.3 325 63.4
CDE02G1890 Ceratophyllum demersum HOM05D006103 ORTHO05D007468 9.2e-91 337.8 326 59.8
Lj8C280G0 Lonicera japonica HOM05D006103 ORTHO05D007468 9.2e-91 337.8 320 55.0
PGSC0003DMG400026583 Solanum tuberosum HOM05D006103 ORTHO05D007468 9.2e-91 337.8 323 64.1
HanXRQChr03g0089621 Helianthus annuus HOM05D006103 ORTHO05D007468 1.6e-90 337.0 322 59.3
Sp2g11900 Schrenkiella parvula HOM05D006103 ORTHO05D007468 3.9e-89 332.4 320 64.4
Carub.0008s0066 Capsella rubella HOM05D006103 ORTHO05D007468 8.6e-89 331.3 319 63.3
AUR62007192 Chenopodium quinoa HOM05D006103 ORTHO05D007468 1.5e-88 330.5 325 54.8
CARHR174300 Cardamine hirsuta HOM05D006103 ORTHO05D007468 5.6e-88 328.6 319 56.1
BraA02t08094Z Brassica rapa HOM05D006103 ORTHO05D007468 2.1e-87 326.6 319 59.2
A02p30800 Brassica napus HOM05D006103 ORTHO05D007468 2.4e-86 323.2 319 58.6
AL8G11110 Arabidopsis lyrata HOM05D006103 ORTHO05D007468 3.1e-86 322.8 319 60.8
SGA_v2.0_scaffold20G09256 Striga asiatica HOM05D006103 ORTHO05D007468 3.1e-86 322.8 323 58.5
Medtr4g099190 Medicago truncatula HOM05D006103 ORTHO05D007468 4.0e-86 322.4 340 57.1
Thhalv10000969m.g Eutrema salsugineum HOM05D006103 ORTHO05D007468 8.9e-86 321.2 319 56.4
ECA240G1687 Erigeron canadensis HOM05D005140 ORTHO05D006288 9.9e-85 317.8 300 57.7
AT5G47090 Arabidopsis thaliana HOM05D006103 ORTHO05D007468 1.7e-84 317.0 319 62.1
BcaC03g16934 Brassica carinata HOM05D006103 ORTHO05D007468 1.7e-84 317.0 319 55.5
C02p48360 Brassica napus HOM05D006103 ORTHO05D007468 2.2e-84 316.6 319 55.5
BolC2t10867H Brassica oleracea HOM05D006103 ORTHO05D007468 2.2e-84 316.6 319 55.5
EL10Ac5g12236 Beta vulgaris HOM05D006103 ORTHO05D007468 4.9e-84 315.5 326 60.7
vmacro00388 Vaccinium macrocarpon HOM05D006103 ORTHO05D007468 4.9e-84 315.5 395 48.1
C02p28550 Brassica napus HOM05D006103 ORTHO05D007468 4.1e-83 312.4 322 53.7
BolC2t08897H Brassica oleracea HOM05D006103 ORTHO05D007468 4.1e-83 312.4 322 53.7
Hund11307 Selenicereus undatus HOM05D006103 ORTHO05D007468 7.1e-83 311.6 279 64.2
BcaC03g15262 Brassica carinata HOM05D006103 ORTHO05D007468 3.5e-82 309.3 322 53.4
GSVIVG01013285001 Vitis vinifera HOM05D006103 ORTHO05D007468 1.3e-81 307.4 186 79.0
unitig_699.g19773 Utricularia gibba HOM05D006103 ORTHO05D007468 5.1e-81 305.4 334 58.7
Aa31LG9G5870 Aethionema arabicum HOM05D006103 ORTHO05D007468 3.6e-79 299.3 349 57.3
Dinv28889 Davidia involucrata HOM05D006103 ORTHO05D007468 1.5e-77 293.9 191 73.8
Rhsim04G0176100 Rhododendron simsii HOM05D006103 ORTHO05D007468 1.5e-77 293.9 272 62.9
Sc22g0001160 Simmondsia chinensis HOM05D006103 ORTHO05D007468 3.4e-77 292.7 188 73.9
SHI07660 Sapria himalayana HOM05D006103 ORTHO05D007468 4.4e-77 292.4 323 56.7
CANSAT21G0160 Cannabis sativa HOM05D001479 ORTHO05D007468 7.6e-77 291.6 189 76.2
Psat4g074520 Pisum sativum HOM05D006103 ORTHO05D007468 9.9e-77 291.2 325 50.8
CANSAT21G1035 Cannabis sativa HOM05D006103 ORTHO05D007468 2.9e-76 289.7 188 76.1
Os06g0139700 Oryza sativa ssp. japonica HOM05D006103 ORTHO05D007468 4.9e-76 288.9 322 57.8
Migut.E01036 Erythranthe guttata HOM05D006103 ORTHO05D007468 8.4e-76 288.1 322 51.9
Migut.E01310 Erythranthe guttata HOM05D006103 ORTHO05D007468 8.4e-76 288.1 322 51.9
ATR0665G401 Amborella trichopoda HOM05D006103 ORTHO05D007468 1.1e-75 287.7 323 57.6
CDE11G0859 Ceratophyllum demersum HOM05D006103 ORTHO05D007468 1.9e-75 287.0 274 61.7
Peaxi162Scf00190g00616 Petunia axillaris HOM05D006103 ORTHO05D007468 9.3e-75 284.6 270 66.3
Zm00001eb377550 Zea mays HOM05D006103 ORTHO05D007468 2.7e-74 283.1 336 50.9
SEGI_16450 Sequoiadendron giganteum HOM05D006103 ORTHO05D007468 3.0e-73 279.6 318 57.9
TPR.G25737 Trifolium pratense HOM05D006103 ORTHO05D007468 5.1e-73 278.9 335 56.1
Nitab4.5_0013289g0030 Nicotiana tabacum HOM05D006103 ORTHO05D007468 2.1e-66 256.9 246 65.4
BcaC07g39778 Brassica carinata HOM05D006103 ORTHO05D007468 6.0e-66 255.4 325 47.7
Hma1.2p1_1672F.1_g296810 Hydrangea macrophylla HOM05D006103 ORTHO05D007468 5.5e-59 232.3 226 62.4
HPP92_014398 Vanilla planifolia HOM05D006103 ORTHO05D007468 5.5e-59 232.3 194 57.7
Pp3c16_2730 Physcomitrium patens HOM05D006103 ORTHO05D007468 1.2e-58 231.1 335 45.4
BolC8t50609H Brassica oleracea HOM05D006103 ORTHO05D007468 6.5e-52 208.8 148 68.9
AUR62018811 Chenopodium quinoa HOM05D006103 ORTHO05D007468 2.3e-49 200.3 218 50.5
SMO171G0121 Selaginella moellendorffii HOM05D006103 ORTHO05D007468 7.4e-48 195.3 323 42.7
C08p30000 Brassica napus HOM05D006103 ORTHO05D007468 3.1e-46 189.9 134 69.4
AagrBONN_evm.TU.Sc2ySwM_368.2081 Anthoceros agrestis HOM05D006103 ORTHO05D007468 5.9e-45 185.7 310 40.0
Lj8A284T15 Lonicera japonica HOM05D006103 ORTHO05D007468 9.4e-43 178.3 137 62.0
CBR_g49667 Chara braunii HOM05D006103 ORTHO05D007468 1.9e-40 170.6 413 35.6
Cfa012348 Carpinus fangiana HOM05D006103 ORTHO05D007468 1.3e-31 141.4 86 80.2
AL8G11000 Arabidopsis lyrata HOM05D006103 ORTHO05D007468 1.9e-27 127.5 168 56.5
SHI06573 Sapria himalayana HOM05D006103 ORTHO05D007468 1.0e-25 121.7 126 52.4
Actinidia02205 Actinidia chinensis HOM05D006103 ORTHO05D007468 8.8e-25 118.6 69 84.1
MCO11G792 Micromonas commoda HOM05D006103 ORTHO05D007468 1.4e-22 111.3 353 27.8
RcHm_v2.0_Chr4g0446321 Rosa chinensis HOM05D006103 ORTHO05D007468 3.1e-22 110.2 203 37.4
Lj8A284T12 Lonicera japonica HOM05D006103 ORTHO05D007468 2.9e-20 103.6 141 44.0
COL.COLO4_06694 Corchorus olitorius HOM05D006103 ORTHO05D007468 8.5e-20 102.1 88 63.6
RcHm_v2.0_Chr6g0308851 Rosa chinensis HOM05D006103 ORTHO05D007468 3.0e-17 93.6 54 85.2
SHI06574 Sapria himalayana HOM05D006103 ORTHO05D007468 5.2e-17 92.8 162 36.4
Cre03.g170100 Chlamydomonas reinhardtii HOM05D006103 ORTHO05D007468 4.1e-14 83.2 153 36.6
Lj8C284T4 Lonicera japonica HOM05D006103 ORTHO05D007468 5.3e-14 82.8 53 67.9
CARHR174410 Cardamine hirsuta HOM05D006103 ORTHO05D007468 6.5e-12 75.9 48 75.0
Actinidia25920 Actinidia chinensis HOM05D006103 ORTHO05D007468 1.5e-11 74.7 73 57.5
Carub.0008s0069 Capsella rubella HOM05D006103 ORTHO05D007468 1.5e-11 74.7 54 70.4
Lj8A280T20 Lonicera japonica HOM05D006103 ORTHO05D007468 8.8e-09 65.5 48 68.8
Rhsim04G0176300 Rhododendron simsii HOM05D006103 ORTHO05D007468 2.8e-07 60.5 52 57.7
RcHm_v2.0_Chr6g0308841 Rosa chinensis HOM05D006103 ORTHO05D007468 4.1e-06 56.6 30 86.7
Ah.07g199910 Amaranthus hybridus HOM05D006103 ORTHO05D007468 9.1e-06 55.5 51 52.9


User provided reference genes

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