Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G081100 Carya illinoinensis HOM05D008466 ORTHO05D010817 1.4e-44 182.6 91 100.0
Potri.007G062442 Populus trichocarpa HOM05D008466 ORTHO05D010817 1.9e-41 172.2 91 95.6
LjContig00315g0013151 Lotus japonicus HOM05D008466 ORTHO05D010817 2.4e-41 171.8 91 94.5
Lalb_Chr00c21g0406001 Lupinus albus HOM05D008466 ORTHO05D010817 2.4e-41 171.8 91 94.5
Lalb_Chr00c39g0409011 Lupinus albus HOM05D008466 ORTHO05D010817 2.4e-41 171.8 91 94.5
Lalb_Chr00c39g0409191 Lupinus albus HOM05D008466 ORTHO05D010817 2.4e-41 171.8 91 94.5
Lalb_Chr18g0049571 Lupinus albus HOM05D008466 ORTHO05D010817 2.4e-41 171.8 91 94.5
TPR.G7441 Trifolium pratense HOM05D008466 ORTHO05D010817 2.4e-41 171.8 91 94.5
Nitab4.5_0014136g0010 Nicotiana tabacum HOM05D008466 ORTHO05D010817 4.6e-40 167.5 91 93.4
A04p09550 Brassica napus HOM05D008466 ORTHO05D010817 6.0e-40 167.2 91 92.3
BolSC28t60321H Brassica oleracea HOM05D008466 ORTHO05D010817 6.0e-40 167.2 91 92.3
BraSC48t46287Z Brassica rapa HOM05D008466 ORTHO05D010817 6.0e-40 167.2 91 92.3
BraSC48t46336Z Brassica rapa HOM05D008466 ORTHO05D010817 6.0e-40 167.2 91 92.3
Nitab4.5_0010033g0120 Nicotiana tabacum HOM05D008466 ORTHO05D010817 3.9e-39 164.5 91 90.1
Nitab4.5_0000172g1700 Nicotiana tabacum HOM05D008466 ORTHO05D010817 1.6e-37 159.1 91 87.9
Zm00001eb187490 Zea mays HOM05D008466 ORTHO05D010817 2.8e-37 158.3 91 89.0
Zm00001eb436220 Zea mays HOM05D008466 ORTHO05D010817 2.8e-37 158.3 91 89.0
Zm00001eb436270 Zea mays HOM05D008466 ORTHO05D010817 2.8e-37 158.3 91 89.0
Zm00001eb436350 Zea mays HOM05D008466 ORTHO05D010817 2.8e-37 158.3 91 89.0
Zm00001eb436460 Zea mays HOM05D008466 ORTHO05D010817 2.8e-37 158.3 91 89.0
Zm00001eb436500 Zea mays HOM05D008466 ORTHO05D010817 2.8e-37 158.3 91 89.0
VMungo0565G0006 Vigna mungo HOM05D008466 ORTHO05D010817 1.8e-36 155.6 84 94.0
SalBow1G0863 Salvia bowleyana HOM05D008466 ORTHO05D010817 1.5e-35 152.5 84 92.9
Glyma.01G136900 Glycine max HOM05D008466 ORTHO05D010817 9.9e-35 149.8 91 81.3
ATMG00285 Arabidopsis thaliana HOM05D008466 ORTHO05D010817 1.3e-34 149.4 83 91.6
Nitab4.5_0001952g0260 Nicotiana tabacum HOM05D008466 ORTHO05D010817 2.2e-34 148.7 83 90.4
Nitab4.5_0000580g0160 Nicotiana tabacum HOM05D008466 ORTHO05D010817 3.8e-34 147.9 91 82.4
SEGI_14764 Sequoiadendron giganteum HOM05D008466 ORTHO05D010817 4.2e-33 144.4 90 83.3
Medtr2g040780 Medicago truncatula HOM05D008466 ORTHO05D010817 8.7e-31 136.7 73 94.5
arahy.Tifrunner.gnm1.ann1.48KRUQ Arachis hypogaea HOM05D008466 ORTHO05D010817 7.4e-30 133.7 73 93.2
CDE02G0407 Ceratophyllum demersum HOM05D008466 ORTHO05D010817 2.8e-29 131.7 74 91.9
Nitab4.5_0002325g0090 Nicotiana tabacum HOM05D008466 ORTHO05D010817 6.2e-29 130.6 80 85.0
Peaxi162Scf00651g00634 Petunia axillaris HOM05D008466 ORTHO05D010817 1.4e-28 129.4 90 76.7
Medtr8g059750 Medicago truncatula HOM05D008466 ORTHO05D010817 1.8e-28 129.0 90 77.8
RcHm_v2.0_MTg0498181 Rosa chinensis HOM05D008466 ORTHO05D010817 2.0e-27 125.6 65 96.9
Mapoly0157s0028 Marchantia polymorpha HOM05D008466 ORTHO05D010817 3.8e-26 121.3 84 78.6
Nitab4.5_0000031g0180 Nicotiana tabacum HOM05D008466 ORTHO05D011423 7.9e-24 113.6 89 68.5
arahy.Tifrunner.gnm1.ann1.GWEJ34 Arachis hypogaea HOM05D008466 ORTHO05D010817 1.6e-21 105.9 58 93.1
BolSC28t60423H Brassica oleracea HOM05D008466 ORTHO05D010817 8.2e-21 103.6 62 83.9
Gorai.001G167700 Gossypium raimondii HOM05D008466 ORTHO05D010817 5.3e-20 100.9 70 74.3
BraSC48t46301Z Brassica rapa HOM05D008466 ORTHO05D010817 4.2e-17 91.3 52 84.6
Haze_26858 Corylus avellana HOM05D000729 ORTHO05D001063 8.8e-15 83.6 79 57.0
Nitab4.5_0008578g0050 Nicotiana tabacum HOM05D008466 ORTHO05D011423 2.8e-13 78.6 45 86.7
Carub.0006s2655 Capsella rubella HOM05D008466 ORTHO05D010817 1.4e-12 76.3 44 84.1
Nitab4.5_0001796g0330 Nicotiana tabacum HOM05D008466 ORTHO05D010817 2.4e-12 75.5 45 82.2
TAR022G0002 Trochodendron aralioides HOM05D003666 ORTHO05D004770 5.7e-06 54.3 70 38.6


User provided reference genes

Program Settings