Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G075400 Carya illinoinensis HOM05D007132 ORTHO05D009120 9.6e-225 783.1 376 100.0
Cfa012869 Carpinus fangiana HOM05D007132 ORTHO05D009120 9.4e-180 633.6 347 85.3
MD05G1209900 Malus domestica HOM05D007132 ORTHO05D009120 1.0e-154 550.4 341 74.5
QL12p004376 Quercus lobata HOM05D007132 ORTHO05D009120 2.8e-152 542.3 425 63.1
CANSAT11G0857 Cannabis sativa HOM05D007132 ORTHO05D009120 2.3e-149 532.7 340 74.4
Atru.chr8.2638 Acer truncatum HOM05D007132 ORTHO05D009120 8.6e-149 530.8 342 71.3
Lj2g0003748 Lotus japonicus HOM05D007132 ORTHO05D009120 1.1e-148 530.4 341 72.1
Nn1g09371 Nelumbo nucifera HOM05D007132 ORTHO05D009120 1.9e-148 529.6 344 73.0
Eucgr.E01138 Eucalyptus grandis HOM05D007132 ORTHO05D009120 2.1e-147 526.2 348 69.8
TWI75G0244 Tripterygium wilfordii HOM05D007132 ORTHO05D009120 2.8e-147 525.8 328 75.0
PGR042G0795 Punica granatum HOM05D007132 ORTHO05D009120 3.6e-147 525.4 342 70.8
VMungo1215G2638 Vigna mungo HOM05D007132 ORTHO05D009120 4.7e-147 525.0 339 70.2
Glyma.11G089600 Glycine max HOM05D007132 ORTHO05D009120 3.0e-146 522.3 339 70.2
RcHm_v2.0_Chr5g0027441 Rosa chinensis HOM05D007132 ORTHO05D009120 3.0e-146 522.3 342 71.1
Potri.001G233200 Populus trichocarpa HOM05D007132 ORTHO05D009120 4.0e-146 521.9 343 72.0
arahy.Tifrunner.gnm1.ann1.63YFX7 Arachis hypogaea HOM05D007132 ORTHO05D009120 1.2e-145 520.4 351 70.9
arahy.Tifrunner.gnm1.ann1.WE0KUF Arachis hypogaea HOM05D007132 ORTHO05D009120 1.2e-145 520.4 351 70.9
Sabra09G0016800 Salix brachista HOM05D007132 ORTHO05D009120 1.5e-145 520.0 344 70.9
Haze_08441 Corylus avellana HOM05D007132 ORTHO05D009120 2.6e-145 519.2 284 85.2
Psat2g145880 Pisum sativum HOM05D007132 ORTHO05D009120 4.4e-145 518.5 340 69.1
Manes.S095221 Manihot esculenta HOM05D007132 ORTHO05D009120 7.5e-145 517.7 330 72.4
Cpa.g.sc90.24 Carica papaya HOM05D004914 ORTHO05D006512 1.3e-144 516.9 373 66.8
FvH4_3g16420 Fragaria vesca HOM05D007132 ORTHO05D009120 2.2e-144 516.2 340 70.3
Potri.009G025400 Populus trichocarpa HOM05D007132 ORTHO05D009120 2.2e-144 516.2 344 70.3
MBI04_g06282_MAGBIO Magnolia biondii HOM05D007132 ORTHO05D009120 2.9e-144 515.8 325 74.2
COL.COLO4_33243 Corchorus olitorius HOM05D007132 ORTHO05D009120 1.4e-143 513.5 331 73.1
Thecc.09G252800 Theobroma cacao HOM05D007132 ORTHO05D009120 1.4e-143 513.5 364 68.4
TPR.G5247 Trifolium pratense HOM05D007132 ORTHO05D009120 1.4e-143 513.5 340 69.1
vmacro00083 Vaccinium macrocarpon HOM05D007132 ORTHO05D009120 1.4e-143 513.5 326 74.5
Duzib168G0014 Durio zibethinus HOM05D007132 ORTHO05D009120 3.2e-143 512.3 333 72.4
Actinidia32785 Actinidia chinensis HOM05D007132 ORTHO05D009120 5.4e-143 511.5 337 73.0
Gorai.006G123100 Gossypium raimondii HOM05D007132 ORTHO05D009120 4.6e-142 508.4 364 67.6
Gohir.D09G105701 Gossypium hirsutum HOM05D007132 ORTHO05D009120 5.9e-142 508.1 364 67.6
Medtr5g025190 Medicago truncatula HOM05D007132 ORTHO05D009120 1.0e-141 507.3 340 67.6
Ciclev10031829m.g Citrus clementina HOM05D007132 ORTHO05D009120 1.3e-141 506.9 340 69.1
CSS0020867 Camellia sinensis var. sinensis HOM05D007132 ORTHO05D009120 2.9e-141 505.8 332 73.5
PGSC0003DMG400001970 Solanum tuberosum HOM05D007132 ORTHO05D009120 3.9e-141 505.4 338 68.0
EL10Ac2g04081 Beta vulgaris HOM05D007132 ORTHO05D009120 8.6e-141 504.2 322 73.3
Gohir.A09G109100 Gossypium hirsutum HOM05D007132 ORTHO05D009120 1.1e-140 503.8 364 67.3
AUR62009339 Chenopodium quinoa HOM05D007132 ORTHO05D009120 4.3e-140 501.9 322 72.7
FAN11G4000 Fragaria x ananassa HOM05D007132 ORTHO05D009120 4.3e-140 501.9 344 68.9
Aqoxy3G02733 Aquilegia oxysepala HOM05D007132 ORTHO05D009120 5.6e-140 501.5 338 67.2
PSO541G5430 Papaver somniferum HOM05D007132 ORTHO05D009120 1.2e-139 500.4 328 70.4
Sopen08g024160 Solanum pennellii HOM05D007132 ORTHO05D009120 6.1e-139 498.0 328 69.2
CDE02G3577 Ceratophyllum demersum HOM05D007132 ORTHO05D009120 8.0e-139 497.7 346 67.1
Nitab4.5_0004157g0010 Nicotiana tabacum HOM05D007132 ORTHO05D009120 3.1e-138 495.7 334 68.6
FAN25G2365 Fragaria x ananassa HOM05D007132 ORTHO05D009120 4.0e-138 495.4 344 68.0
Solyc08g075510.4 Solanum lycopersicum HOM05D007132 ORTHO05D009120 2.0e-137 493.0 328 68.9
SalBow8G0736 Salvia bowleyana HOM05D007132 ORTHO05D009120 7.5e-137 491.1 331 67.7
Oeu046789.1 Olea europaea HOM05D007132 ORTHO05D009120 1.3e-136 490.3 329 68.4
A06p21200 Brassica napus HOM05D007132 ORTHO05D009120 3.7e-136 488.8 329 68.7
BraA06t25207Z Brassica rapa HOM05D007132 ORTHO05D009120 3.2e-135 485.7 328 68.9
Sp2g03890 Schrenkiella parvula HOM05D007132 ORTHO05D009120 3.2e-135 485.7 328 69.8
BcaB01g01051 Brassica carinata HOM05D007132 ORTHO05D009120 7.0e-135 484.6 341 66.9
CARHR154210 Cardamine hirsuta HOM05D007132 ORTHO05D009120 7.0e-135 484.6 340 65.9
Lj8C1T2 Lonicera japonica HOM05D007132 ORTHO05D009120 7.0e-135 484.6 392 59.2
DCAR_028364 Daucus carota HOM05D007132 ORTHO05D009120 1.2e-134 483.8 324 68.2
MSTRG.1761 Avicennia marina HOM05D007132 ORTHO05D009120 2.7e-134 482.6 332 66.6
Lj8A344T21 Lonicera japonica HOM05D007132 ORTHO05D009120 2.7e-134 482.6 391 59.3
Aa31LG9G15710 Aethionema arabicum HOM05D007132 ORTHO05D009120 3.9e-133 478.8 331 66.8
CAN.G1026.1 Capsicum annuum HOM05D007132 ORTHO05D009120 2.5e-132 476.1 374 59.1
BolC3t19289H Brassica oleracea HOM05D007132 ORTHO05D009120 4.3e-132 475.3 330 68.2
Thhalv10002595m.g Eutrema salsugineum HOM05D007132 ORTHO05D009120 2.1e-131 473.0 339 66.4
Nitab4.5_0000030g0380 Nicotiana tabacum HOM05D007132 ORTHO05D009120 2.1e-131 473.0 334 66.5
C03p70370 Brassica napus HOM05D007132 ORTHO05D009120 4.7e-131 471.9 328 68.0
Carub.0005s1173 Capsella rubella HOM05D007132 ORTHO05D009120 2.3e-130 469.5 327 67.0
Lsat_1_v5_gn_6_15181 Lactuca sativa HOM05D007132 ORTHO05D009120 8.9e-130 467.6 330 65.8
Cc08_g05480 Coffea canephora HOM05D007132 ORTHO05D009120 1.5e-129 466.8 333 65.8
Sc01g0005800 Simmondsia chinensis HOM05D007132 ORTHO05D009120 7.5e-129 464.5 308 70.5
Peaxi162Scf00053g00715 Petunia axillaris HOM05D007132 ORTHO05D009120 9.8e-129 464.2 340 63.2
AL5G24560 Arabidopsis lyrata HOM05D007132 ORTHO05D009120 1.3e-128 463.8 333 66.1
HanXRQChr12g0382251 Helianthus annuus HOM05D007132 ORTHO05D009120 1.7e-128 463.4 321 65.4
AUR62023023 Chenopodium quinoa HOM05D007132 ORTHO05D009120 8.3e-128 461.1 321 67.6
AUR62043353 Chenopodium quinoa HOM05D007132 ORTHO05D009120 8.3e-128 461.1 321 67.6
AT3G45880 Arabidopsis thaliana HOM05D007132 ORTHO05D009120 7.1e-127 458.0 340 64.7
SGA_v2.0_scaffold111G31350 Striga asiatica HOM05D007132 ORTHO05D009120 3.0e-125 452.6 377 58.4
Prupe.4G147600 Prunus persica HOM05D007132 ORTHO05D009120 8.6e-125 451.1 282 74.5
ATR0568G089 Amborella trichopoda HOM05D007132 ORTHO05D009120 1.1e-124 450.7 327 63.9
THA.LOC104798521 Tarenaya hassleriana HOM05D007132 ORTHO05D009120 3.1e-122 442.6 340 60.3
Lalb_Chr05g0215041 Lupinus albus HOM05D007132 ORTHO05D009120 3.7e-120 435.6 284 70.8
Phvul.002G120400 Phaseolus vulgaris HOM05D007132 ORTHO05D009120 1.4e-119 433.7 280 70.0
Hund11034 Selenicereus undatus HOM05D007132 ORTHO05D009120 7.1e-119 431.4 282 70.9
BcaC01g01945 Brassica carinata HOM05D007132 ORTHO05D009120 3.5e-118 429.1 306 66.3
SEGI_38459 Sequoiadendron giganteum HOM05D007132 ORTHO05D009120 6.6e-117 424.9 325 61.5
Os09g0483600 Oryza sativa ssp. japonica HOM05D007132 ORTHO05D009120 5.2e-114 415.2 354 57.3
ECA233G5682 Erigeron canadensis HOM05D003740 ORTHO05D004611 3.8e-112 409.1 278 67.6
unitig_46.g18229 Utricularia gibba HOM05D007132 ORTHO05D009120 3.8e-112 409.1 328 58.5
Zm00001eb316510 Zea mays HOM05D007132 ORTHO05D009120 2.7e-110 402.9 336 60.1
SMO367G0267 Selaginella moellendorffii HOM05D007132 ORTHO05D009120 1.7e-109 400.2 340 57.4
Pp3c2_13200 Physcomitrium patens HOM05D007132 ORTHO05D009120 7.3e-108 394.8 350 55.1
Ah.10g035250 Amaranthus hybridus HOM05D001758 ORTHO05D005969 6.4e-104 381.7 282 65.2
PSO675G1526 Papaver somniferum HOM05D007132 ORTHO05D009120 5.8e-97 358.6 248 66.5
Nitab4.5_0000898g0130 Nicotiana tabacum HOM05D007132 ORTHO05D009120 7.1e-95 351.7 271 62.4
MD10G1196200 Malus domestica HOM05D007132 ORTHO05D009120 3.9e-69 266.2 166 71.7
TAR629G3242 Trochodendron aralioides HOM05D007132 ORTHO05D009120 6.3e-67 258.8 185 68.1
AagrBONN_evm.TU.Sc2ySwM_344.2529 Anthoceros agrestis HOM05D007132 ORTHO05D009120 6.5e-64 248.8 277 46.6
Cc02_g31510 Coffea canephora HOM05D007132 ORTHO05D009120 1.4e-63 247.7 145 75.2
Sp5g15660 Schrenkiella parvula HOM05D007132 ORTHO05D009120 3.1e-58 229.9 272 48.9
TAR629G3340 Trochodendron aralioides HOM05D007132 ORTHO05D009120 3.5e-57 226.5 133 74.4
GSVIVG01036861001 Vitis vinifera HOM05D007132 ORTHO05D009120 1.7e-56 224.2 133 74.4
MCO03G301 Micromonas commoda HOM05D007132 ORTHO05D009120 4.2e-55 219.5 320 39.7
Cfa022513 Carpinus fangiana HOM05D007132 ORTHO05D009120 6.1e-46 189.1 306 35.9
Migut.E01364 Erythranthe guttata HOM05D007132 ORTHO05D009120 5.4e-42 176.0 111 71.2
PRCOL_00004459 Prasinoderma coloniale HOM05D007132 ORTHO05D009120 6.1e-38 162.5 292 33.9
Rhsim11G0036100 Rhododendron simsii HOM05D007132 ORTHO05D009120 3.8e-32 143.3 78 80.8
Cre03.g175750 Chlamydomonas reinhardtii HOM05D007132 ORTHO05D009120 8.9e-29 132.1 248 32.7
Haze_08440 Corylus avellana HOM05D000433 ORTHO05D000443 1.6e-22 111.3 78 67.9
Psat2g145800 Pisum sativum HOM05D007132 ORTHO05D009120 3.4e-20 103.6 61 70.5
Lalb_Chr05g0215031 Lupinus albus HOM05D007132 ORTHO05D009120 8.3e-19 99.0 57 75.4
Nitab4.5_0000480g0030 Nicotiana tabacum HOM05D007132 ORTHO05D009120 5.4e-18 96.3 80 56.2
Medtr5g032230 Medicago truncatula HOM05D007132 ORTHO05D009120 7.8e-17 92.4 101 46.5
FAN13G1029 Fragaria x ananassa HOM05D007132 ORTHO05D009181 3.3e-15 87.0 191 33.5
CDE11G0272 Ceratophyllum demersum HOM05D000435 ORTHO05D000430 5.6e-15 86.3 112 42.0
Pp3c17_10850 Physcomitrium patens HOM05D004419 ORTHO05D005480 2.0e-12 77.8 310 23.5
FAN02G3822 Fragaria x ananassa HOM05D007132 ORTHO05D009120 3.7e-11 73.6 93 44.1
Rhsim11G0036200 Rhododendron simsii HOM05D007132 ORTHO05D009120 1.4e-10 71.6 44 70.5
Carub.0003s2077 Capsella rubella HOM05D004419 ORTHO05D005480 1.6e-09 68.2 286 24.8
CSS0021936 Camellia sinensis var. sinensis HOM05D004419 ORTHO05D005480 4.6e-09 66.6 273 24.2
THA.LOC104816908 Tarenaya hassleriana HOM05D004419 ORTHO05D005480 1.0e-08 65.5 276 23.9
CsaV3_1G042600 Cucumis sativus L. HOM05D004419 ORTHO05D005480 1.3e-08 65.1 274 23.4
Migut.D00562 Erythranthe guttata HOM05D004419 ORTHO05D005480 1.3e-08 65.1 284 24.3
Ciclev10015488m.g Citrus clementina HOM05D004419 ORTHO05D005480 1.7e-08 64.7 273 24.5
HanXRQChr02g0056491 Helianthus annuus HOM05D004419 ORTHO05D005480 1.7e-08 64.7 284 21.8
Nn7g36075 Nelumbo nucifera HOM05D004419 ORTHO05D005480 3.0e-08 63.9 282 24.1
CBR_g68529 Chara braunii HOM05D004419 ORTHO05D005480 3.9e-08 63.5 279 22.9
MD03G1020700 Malus domestica HOM05D004419 ORTHO05D005480 6.6e-08 62.8 277 22.4
MELO3C015209.2 Cucumis melo HOM05D004419 ORTHO05D005480 1.1e-07 62.0 274 22.6
Ah.04g161770 Amaranthus hybridus HOM05D004419 ORTHO05D005480 1.5e-07 61.6 272 23.5
AL3G34730 Arabidopsis lyrata HOM05D004419 ORTHO05D005480 2.5e-07 60.8 299 23.4
Prupe.6G015700 Prunus persica HOM05D004419 ORTHO05D005480 3.3e-07 60.5 277 22.4
Sed0001509 Sechium edule HOM05D004419 ORTHO05D005480 5.6e-07 59.7 289 21.5
Pp3c5_1010 Physcomitrium patens HOM05D004419 ORTHO05D005480 7.3e-07 59.3 140 27.1
Aa31LG8G7630 Aethionema arabicum HOM05D004419 ORTHO05D005480 9.5e-07 58.9 288 21.5
Mapoly0061s0019 Marchantia polymorpha HOM05D002457 ORTHO05D008732 2.1e-06 57.8 263 24.3
Rhsim11G0036300 Rhododendron simsii HOM05D000007 ORTHO05D000039 4.7e-06 56.6 32 62.5
Cre12.g485950 Chlamydomonas reinhardtii HOM05D002457 ORTHO05D008732 8.1e-06 55.8 278 25.2
HPP92_011163 Vanilla planifolia HOM05D002457 ORTHO05D005750 8.1e-06 55.8 279 22.2


User provided reference genes

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