Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G066300 Carya illinoinensis HOM05D006956 ORTHO05D008824 1.3e-111 406.4 205 100.0
Haze_03154 Corylus avellana HOM05D006956 ORTHO05D008824 7.8e-96 354.0 205 85.4
Cfa010806 Carpinus fangiana HOM05D006956 ORTHO05D008824 1.5e-94 349.7 195 88.7
QL04p076576 Quercus lobata HOM05D006956 ORTHO05D008824 9.6e-94 347.1 204 84.3
Dinv19614 Davidia involucrata HOM05D006956 ORTHO05D008824 4.4e-91 338.2 204 80.9
TAR362G0399 Trochodendron aralioides HOM05D006956 ORTHO05D008824 1.4e-89 333.2 203 79.8
Nn7g38051 Nelumbo nucifera HOM05D006956 ORTHO05D008824 7.1e-89 330.9 202 79.2
Gorai.007G335600 Gossypium raimondii HOM05D006956 ORTHO05D008824 2.7e-88 328.9 201 78.6
TWI39G0297 Tripterygium wilfordii HOM05D006956 ORTHO05D008824 6.0e-88 327.8 205 79.0
CSS0020916 Camellia sinensis var. sinensis HOM05D006956 ORTHO05D008824 1.0e-87 327.0 197 78.7
Sabra16G0296900 Salix brachista HOM05D006956 ORTHO05D008824 3.0e-87 325.5 211 77.7
Potri.001G439000 Populus trichocarpa HOM05D006956 ORTHO05D008824 3.9e-87 325.1 204 79.4
Rhsim04G0005600 Rhododendron simsii HOM05D006956 ORTHO05D008824 1.9e-86 322.8 206 77.7
Hma1.2p1_0334F.1_g128720 Hydrangea macrophylla HOM05D006956 ORTHO05D008824 4.3e-86 321.6 205 76.6
MD10G1203100 Malus domestica HOM05D006956 ORTHO05D008824 7.3e-86 320.9 203 76.4
Thecc.07G151600 Theobroma cacao HOM05D006956 ORTHO05D008824 7.3e-86 320.9 203 77.8
COL.COLO4_07377 Corchorus olitorius HOM05D006956 ORTHO05D008824 9.6e-86 320.5 203 76.8
Gohir.A11G291500 Gossypium hirsutum HOM05D006956 ORTHO05D008824 9.6e-86 320.5 199 77.9
Phvul.005G057800 Phaseolus vulgaris HOM05D006956 ORTHO05D008824 1.3e-85 320.1 201 74.6
Prupe.4G139000 Prunus persica HOM05D006956 ORTHO05D008824 6.2e-85 317.8 197 78.2
vmacro00957 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 6.2e-85 317.8 205 76.1
Lj3g0018815 Lotus japonicus HOM05D006956 ORTHO05D008824 1.8e-84 316.2 201 74.6
MSTRG.13068 Avicennia marina HOM05D006956 ORTHO05D008824 4.0e-84 315.1 203 74.9
Manes.06G172400 Manihot esculenta HOM05D006956 ORTHO05D008824 5.3e-84 314.7 206 76.7
Peaxi162Scf00286g00448 Petunia axillaris HOM05D006956 ORTHO05D008824 6.9e-84 314.3 203 76.4
Solyc09g098220.3 Solanum lycopersicum HOM05D006956 ORTHO05D008824 6.9e-84 314.3 203 76.4
Sopen09g036160 Solanum pennellii HOM05D006956 ORTHO05D008824 6.9e-84 314.3 203 76.4
Cc05_g16140 Coffea canephora HOM05D006956 ORTHO05D008824 1.5e-83 313.2 209 74.6
Medtr2g069340 Medicago truncatula HOM05D006956 ORTHO05D008824 2.0e-83 312.8 201 73.6
Psat1g012040 Pisum sativum HOM05D006956 ORTHO05D008824 2.0e-83 312.8 202 75.2
Atru.chr9.1519 Acer truncatum HOM05D006956 ORTHO05D008824 2.6e-83 312.4 205 75.1
TPR.G9744 Trifolium pratense HOM05D006956 ORTHO05D008824 3.4e-83 312.0 201 73.6
VMungo1080G0523 Vigna mungo HOM05D006956 ORTHO05D008824 3.4e-83 312.0 201 73.1
CSS0000379 Camellia sinensis var. sinensis HOM05D006956 ORTHO05D008824 4.5e-83 311.6 199 76.4
CAN.G710.39 Capsicum annuum HOM05D006956 ORTHO05D008824 9.9e-83 310.5 204 76.0
FvH4_3g15651 Fragaria vesca HOM05D006956 ORTHO05D008824 9.9e-83 310.5 205 74.1
Eucgr.A00498 Eucalyptus grandis HOM05D006956 ORTHO05D008824 2.2e-82 309.3 201 73.6
Glyma.15G256600 Glycine max HOM05D006956 ORTHO05D008824 2.9e-82 308.9 201 73.6
Ca_03670_v3 Cicer arietinum L. HOM05D006956 ORTHO05D008824 4.9e-82 308.1 201 74.1
Lalb_Chr20g0108711 Lupinus albus HOM05D006956 ORTHO05D008824 4.9e-82 308.1 201 73.1
RcHm_v2.0_Chr5g0026331 Rosa chinensis HOM05D006956 ORTHO05D008824 1.4e-81 306.6 205 73.2
Lj3g0016125 Lotus japonicus HOM05D006956 ORTHO05D008824 1.9e-81 306.2 201 73.6
CANSAT54G1214 Cannabis sativa HOM05D006956 ORTHO05D008824 2.4e-81 305.8 198 76.8
Cfa010808 Carpinus fangiana HOM05D006956 ORTHO05D008824 4.2e-81 305.1 180 85.0
Ciclev10022296m.g Citrus clementina HOM05D006956 ORTHO05D008824 7.1e-81 304.3 201 74.6
FAN21G1707 Fragaria x ananassa HOM05D006956 ORTHO05D008824 7.1e-81 304.3 205 72.7
CsaV3_6G013760 Cucumis sativus L. HOM05D006956 ORTHO05D008824 6.0e-80 301.2 204 74.0
MELO3C019670.2 Cucumis melo HOM05D006956 ORTHO05D008824 2.3e-79 299.3 203 73.4
FAN11G3326 Fragaria x ananassa HOM05D006956 ORTHO05D008824 5.1e-79 298.1 222 68.0
Migut.H01688 Erythranthe guttata HOM05D006956 ORTHO05D008824 1.1e-78 297.0 203 70.9
ClCG02G018480 Citrullus lanatus HOM05D006956 ORTHO05D008824 1.9e-78 296.2 224 67.4
GSVIVG01020406001 Vitis vinifera HOM05D006956 ORTHO05D008824 2.5e-78 295.8 175 83.4
arahy.Tifrunner.gnm1.ann1.JC2BA5 Arachis hypogaea HOM05D006956 ORTHO05D008824 3.3e-78 295.4 201 68.7
BraA09t41455Z Brassica rapa HOM05D006956 ORTHO05D008824 2.1e-77 292.7 204 68.1
A09p60820 Brassica napus HOM05D006956 ORTHO05D008824 1.1e-76 290.4 204 67.6
Nitab4.5_0001526g0100 Nicotiana tabacum HOM05D006956 ORTHO05D008824 1.1e-76 290.4 219 67.6
PGR142G1185 Punica granatum HOM05D006956 ORTHO05D008824 1.4e-76 290.0 192 75.0
Aqoxy1G01495 Aquilegia oxysepala HOM05D006956 ORTHO05D008824 1.8e-76 289.7 202 71.3
Thhalv10008810m.g Eutrema salsugineum HOM05D006956 ORTHO05D008824 3.1e-76 288.9 198 69.2
AT1G16590 Arabidopsis thaliana HOM05D006956 ORTHO05D008824 4.0e-76 288.5 199 67.8
SalBow5G4858 Salvia bowleyana HOM05D006956 ORTHO05D008824 4.0e-76 288.5 203 67.5
BolC8t51982H Brassica oleracea HOM05D006956 ORTHO05D008824 9.0e-76 287.3 201 68.2
C08p44410 Brassica napus HOM05D006956 ORTHO05D008824 1.5e-75 286.6 201 67.2
THA.LOC104808124 Tarenaya hassleriana HOM05D006956 ORTHO05D008824 2.2e-74 282.7 193 71.5
AL1G28750 Arabidopsis lyrata HOM05D006956 ORTHO05D008824 2.9e-74 282.3 198 70.2
arahy.Tifrunner.gnm1.ann1.82TPB7 Arachis hypogaea HOM05D006956 ORTHO05D008824 4.9e-74 281.6 232 59.9
HPP92_011671 Vanilla planifolia HOM05D006956 ORTHO05D008824 4.9e-74 281.6 203 66.5
CARHR017060 Cardamine hirsuta HOM05D006956 ORTHO05D008824 2.7e-72 275.8 197 66.0
SGA_v2.0_scaffold49G18176 Striga asiatica HOM05D006956 ORTHO05D008824 3.9e-71 271.9 197 68.5
PSO223G0077 Papaver somniferum HOM05D006956 ORTHO05D008824 8.7e-71 270.8 195 69.2
Aa31LG7G1120 Aethionema arabicum HOM05D006956 ORTHO05D008824 1.5e-70 270.0 206 64.1
PSO210G3417 Papaver somniferum HOM05D006956 ORTHO05D008824 2.5e-70 269.2 194 68.6
Carub.0001s1634 Capsella rubella HOM05D006956 ORTHO05D008824 4.3e-70 268.5 201 64.7
AUR62026907 Chenopodium quinoa HOM05D006956 ORTHO05D008824 1.4e-68 263.5 190 67.4
AUR62042418 Chenopodium quinoa HOM05D006956 ORTHO05D008824 1.4e-68 263.5 188 67.6
CDE05G1956 Ceratophyllum demersum HOM05D003342 ORTHO05D003861 4.0e-68 261.9 204 65.7
Zm00001eb198240 Zea mays HOM05D006956 ORTHO05D008824 6.9e-68 261.2 200 64.0
PGSC0003DMG400014067 Solanum tuberosum HOM05D006956 ORTHO05D008466 3.4e-67 258.8 166 74.7
Sp1g14740 Schrenkiella parvula HOM05D006956 ORTHO05D008824 9.3e-65 250.8 200 60.0
MBI18_g45405_MAGBIO Magnolia biondii HOM05D006956 ORTHO05D008824 4.3e-62 241.9 157 73.9
HanXRQChr08g0231891 Helianthus annuus HOM05D006956 ORTHO05D008824 1.8e-60 236.5 203 58.6
Sc08g0007560 Simmondsia chinensis HOM05D006956 ORTHO05D008824 2.4e-60 236.1 158 70.3
Sed0013658 Sechium edule HOM05D006956 ORTHO05D008824 1.5e-59 233.4 155 76.1
ECA247G3084 Erigeron canadensis HOM05D006956 ORTHO05D008824 5.1e-55 218.4 195 56.4
QL04p076191 Quercus lobata HOM05D006956 ORTHO05D008824 3.7e-53 212.2 128 81.2
QL93p0133_0021 Quercus lobata HOM05D006956 ORTHO05D008824 3.7e-53 212.2 128 81.2
Prupe.4G141800 Prunus persica HOM05D006956 ORTHO05D008824 1.0e-50 204.1 131 77.1
FAN25G3578 Fragaria x ananassa HOM05D006956 ORTHO05D008824 1.4e-47 193.7 138 70.3
RcHm_v2.0_Chr5g0026311 Rosa chinensis HOM05D006956 ORTHO05D008824 3.0e-47 192.6 205 52.7
AagrBONN_evm.TU.Sc2ySwM_368.712 Anthoceros agrestis HOM05D006956 ORTHO05D008824 4.4e-46 188.7 201 47.3
Actinidia35432 Actinidia chinensis HOM05D006956 ORTHO05D008824 2.8e-45 186.0 147 67.3
Prupe.4G139100 Prunus persica HOM05D006956 ORTHO05D008824 1.8e-44 183.3 164 61.6
MD17G1180100 Malus domestica HOM05D006956 ORTHO05D008824 1.0e-42 177.6 127 72.4
Lsat_1_v5_gn_6_63040 Lactuca sativa HOM05D006956 ORTHO05D008824 4.2e-41 172.2 169 53.8
Pp3c4_6830 Physcomitrium patens HOM05D006956 ORTHO05D008824 1.4e-39 167.2 197 44.7
SMO340G0149 Selaginella moellendorffii HOM05D006956 ORTHO05D008824 2.0e-38 163.3 187 41.7
Pp3c4_6840 Physcomitrium patens HOM05D006956 ORTHO05D008824 9.7e-38 161.0 186 42.5
SEGI_37897 Sequoiadendron giganteum HOM05D006956 ORTHO05D008824 9.1e-36 154.5 130 56.9
Mapoly0023s0023 Marchantia polymorpha HOM05D006956 ORTHO05D008824 8.0e-32 141.4 131 52.7
vmacro22747 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 3.1e-28 129.4 180 43.9
FAN16G1261 Fragaria x ananassa HOM05D006956 ORTHO05D008824 1.6e-27 127.1 115 59.1
vmacro09782 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 1.9e-25 120.2 67 79.1
Potri.011G142501 Populus trichocarpa HOM05D006956 ORTHO05D008824 9.4e-25 117.9 92 64.1
Lju41A37T48 Lonicera japonica HOM05D006956 ORTHO05D008824 4.7e-24 115.5 84 66.7
MBI18_g44288_MAGBIO Magnolia biondii HOM05D006956 ORTHO05D008824 1.8e-23 113.6 76 75.0
Glyma.08G170300 Glycine max HOM05D006956 ORTHO05D008824 3.7e-21 105.9 157 42.7
ATR0753G159 Amborella trichopoda HOM05D006956 ORTHO05D008824 6.3e-21 105.1 80 63.8
MD05G1220700 Malus domestica HOM05D006956 ORTHO05D008824 4.1e-20 102.4 89 57.3
Cre13.g575333 Chlamydomonas reinhardtii HOM05D006956 ORTHO05D008824 5.0e-18 95.5 143 37.8
RcHm_v2.0_Chr5g0031421 Rosa chinensis HOM05D006956 ORTHO05D008824 2.5e-17 93.2 111 54.1
Cpa.g.sc67.70 Carica papaya HOM05D006956 ORTHO05D008824 4.7e-16 89.0 64 65.6
Lalb_Chr25g0284921 Lupinus albus HOM05D006956 ORTHO05D008824 3.4e-14 82.8 160 36.2
Lju41A37T47 Lonicera japonica HOM05D006956 ORTHO05D008824 7.8e-11 71.6 44 77.3
SHI21449 Sapria himalayana HOM05D000257 ORTHO05D008466 3.3e-09 66.2 41 63.4
AagrBONN_evm.TU.Sc2ySwM_228.148 Anthoceros agrestis HOM05D004675 ORTHO05D005631 1.8e-07 60.5 171 25.7
Pp3c4_13910 Physcomitrium patens HOM05D004675 ORTHO05D005631 4.0e-07 59.3 174 21.8
SMO201G0213 Selaginella moellendorffii HOM05D004675 ORTHO05D005631 5.2e-07 58.9 163 25.2
MCO02G468 Micromonas commoda HOM05D006956 ORTHO05D008824 8.9e-07 58.2 89 40.4
TPR.G22507 Trifolium pratense HOM05D006956 ORTHO05D008824 1.5e-06 57.4 37 67.6
CBR_g22979 Chara braunii HOM05D004675 ORTHO05D005631 2.6e-06 56.6 180 22.8
SHI21445 Sapria himalayana HOM05D000105 ORTHO05D000023 4.4e-06 55.8 38 68.4


User provided reference genes

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