Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G059900 Carya illinoinensis HOM05D002385 ORTHO05D002245 3.2e-55 218.0 98 100.0
CiPaw.11G059800 Carya illinoinensis HOM05D014462 ORTHO05D018947 6.7e-37 157.1 88 78.4
QL04p073225 Quercus lobata HOM05D002385 ORTHO05D002245 2.2e-19 99.0 85 55.3
Dinv19617 Davidia involucrata HOM05D002385 ORTHO05D002245 4.1e-18 94.7 100 53.0
Thecc.07G152000 Theobroma cacao HOM05D021429 ORTHO05D022417 5.3e-18 94.4 99 52.5
Glyma.15G256000 Glycine max HOM05D002385 ORTHO05D002245 1.0e-16 90.1 57 66.7
Glyma.08G171400 Glycine max HOM05D002385 ORTHO05D002245 1.1e-15 86.7 57 64.9
Oeu056976.2 Olea europaea HOM05D002385 ORTHO05D002245 2.1e-14 82.4 95 46.3
Atru.chr11.2673 Acer truncatum HOM05D002385 ORTHO05D002245 8.0e-14 80.5 94 46.8
ClCG09G022550 Citrullus lanatus HOM05D002385 ORTHO05D002245 8.8e-13 77.0 94 45.7
Sed0017850 Sechium edule HOM05D002385 ORTHO05D002245 4.4e-12 74.7 94 45.7
TAR626G0681 Trochodendron aralioides HOM05D002385 ORTHO05D002245 4.4e-12 74.7 97 48.5
Phvul.005G057500 Phaseolus vulgaris HOM05D002385 ORTHO05D002245 3.7e-11 71.6 80 50.0
Psat1g003560 Pisum sativum HOM05D002385 ORTHO05D002245 4.8e-11 71.2 95 44.2
Carub.0004s1351 Capsella rubella HOM05D002385 ORTHO05D002245 6.3e-11 70.9 96 44.8
Atru.chr8.975 Acer truncatum HOM05D002385 ORTHO05D002245 8.3e-11 70.5 96 43.8
Atru.chr8.976 Acer truncatum HOM05D002385 ORTHO05D002245 8.3e-11 70.5 96 43.8
Glyma.08G170900 Glycine max HOM05D002385 ORTHO05D002245 8.3e-11 70.5 57 57.9
Thecc.07G151900 Theobroma cacao HOM05D021429 ORTHO05D022417 1.4e-10 69.7 82 47.6
Migut.M01554 Erythranthe guttata HOM05D002385 ORTHO05D002245 3.1e-10 68.6 96 41.7
C04p61680 Brassica napus HOM05D002385 ORTHO05D002245 7.0e-10 67.4 65 52.3
Glyma.08G170700 Glycine max HOM05D002385 ORTHO05D002245 7.0e-10 67.4 80 46.2
Medtr4g091090 Medicago truncatula HOM05D002385 ORTHO05D002245 7.0e-10 67.4 94 43.6
BcaB06g28585 Brassica carinata HOM05D002385 ORTHO05D002245 9.1e-10 67.0 95 43.2
Glyma.15G256300 Glycine max HOM05D002385 ORTHO05D002245 9.1e-10 67.0 80 46.2
Medtr2g069400 Medicago truncatula HOM05D002385 ORTHO05D002245 9.1e-10 67.0 96 43.8
TPR.G9750 Trifolium pratense HOM05D002385 ORTHO05D002245 9.1e-10 67.0 95 42.1
BcaC02g11342 Brassica carinata HOM05D002385 ORTHO05D002245 1.2e-09 66.6 96 44.8
C04p17420 Brassica napus HOM05D002385 ORTHO05D002245 1.2e-09 66.6 96 44.8
Medtr1g040775 Medicago truncatula HOM05D002385 ORTHO05D002245 1.2e-09 66.6 92 40.2
Medtr5g042360 Medicago truncatula HOM05D002385 ORTHO05D002245 1.2e-09 66.6 92 40.2
Sed0023256 Sechium edule HOM05D002385 ORTHO05D002245 1.2e-09 66.6 68 47.1
BcaB02g10483 Brassica carinata HOM05D002385 ORTHO05D002245 1.6e-09 66.2 96 44.8
A05p12990 Brassica napus HOM05D002385 ORTHO05D002245 1.6e-09 66.2 96 44.8
BraA05t20239Z Brassica rapa HOM05D002385 ORTHO05D002245 1.6e-09 66.2 96 44.8
Duzib235G0963 Durio zibethinus HOM05D014462 ORTHO05D002245 1.6e-09 66.2 107 38.3
Medtr1g040735 Medicago truncatula HOM05D002385 ORTHO05D002245 1.6e-09 66.2 92 40.2
Psat1g003480 Pisum sativum HOM05D002385 ORTHO05D002245 1.6e-09 66.2 95 43.2
QL04p061416 Quercus lobata HOM05D002385 ORTHO05D002245 2.0e-09 65.9 85 48.2
THA.LOC109116124 Tarenaya hassleriana HOM05D002385 ORTHO05D002245 2.0e-09 65.9 97 44.3
AL4G27550 Arabidopsis lyrata HOM05D002385 ORTHO05D002245 2.7e-09 65.5 96 43.8
BcaC02g07945 Brassica carinata HOM05D002385 ORTHO05D002245 2.7e-09 65.5 95 42.1
BraA04t17993Z Brassica rapa HOM05D002385 ORTHO05D002245 2.7e-09 65.5 95 41.1
C05p41120 Brassica napus HOM05D002385 ORTHO05D002245 4.5e-09 64.7 50 62.0
BolC5t32855H Brassica oleracea HOM05D002385 ORTHO05D002245 4.5e-09 64.7 50 62.0
Sp4g14570 Schrenkiella parvula HOM05D002385 ORTHO05D002245 4.5e-09 64.7 96 43.8
THA.LOC104822278 Tarenaya hassleriana HOM05D002385 ORTHO05D002245 5.9e-09 64.3 61 52.5
AT2G32210 Arabidopsis thaliana HOM05D002385 ORTHO05D002245 7.7e-09 63.9 96 42.7
Lj3g0007335 Lotus japonicus HOM05D002385 ORTHO05D002245 7.7e-09 63.9 81 45.7
Nn7g38131 Nelumbo nucifera HOM05D002385 ORTHO05D002245 7.7e-09 63.9 96 43.8
Eucgr.A00897 Eucalyptus grandis HOM05D002385 ORTHO05D002245 1.0e-08 63.5 96 43.8
Glyma.15G256200 Glycine max HOM05D002385 ORTHO05D002245 1.0e-08 63.5 51 54.9
Gohir.D07G190900 Gossypium hirsutum HOM05D002385 ORTHO05D002245 1.0e-08 63.5 96 42.7
Gorai.001G213300 Gossypium raimondii HOM05D002385 ORTHO05D002245 1.0e-08 63.5 96 42.7
Manes.11G006500 Manihot esculenta HOM05D002385 ORTHO05D002245 1.0e-08 63.5 96 38.5
arahy.Tifrunner.gnm1.ann1.3UW96L Arachis hypogaea HOM05D002385 ORTHO05D002245 1.3e-08 63.2 80 47.5
Eucgr.A00900 Eucalyptus grandis HOM05D002385 ORTHO05D002245 1.3e-08 63.2 94 40.4
Sp4g14580 Schrenkiella parvula HOM05D002385 ORTHO05D002245 1.3e-08 63.2 96 42.7
CANSAT64G2629 Cannabis sativa HOM05D002385 ORTHO05D002245 1.7e-08 62.8 54 57.4
CARHR125980 Cardamine hirsuta HOM05D002385 ORTHO05D002245 1.7e-08 62.8 98 41.8
Glyma.08G170800 Glycine max HOM05D002385 ORTHO05D002245 1.7e-08 62.8 61 52.5
HPP92_004187 Vanilla planifolia HOM05D002385 ORTHO05D002245 1.7e-08 62.8 96 44.8
GSVIVG01015781001 Vitis vinifera HOM05D002385 ORTHO05D002245 2.2e-08 62.4 95 45.3
GSVIVG01015789001 Vitis vinifera HOM05D002385 ORTHO05D002245 2.2e-08 62.4 95 45.3
Lalb_Chr25g0284941 Lupinus albus HOM05D002385 ORTHO05D002245 2.9e-08 62.0 80 46.2
Oeu003091.1 Olea europaea HOM05D002385 ORTHO05D002245 2.9e-08 62.0 95 44.2
BraA10t42676Z Brassica rapa HOM05D002385 ORTHO05D002245 3.8e-08 61.6 95 37.9
ECA240G4719 Erigeron canadensis HOM05D002385 ORTHO05D002245 3.8e-08 61.6 95 36.8
BolC5t29144H Brassica oleracea HOM05D002385 ORTHO05D002245 5.0e-08 61.2 95 37.9
Eucgr.A00898 Eucalyptus grandis HOM05D002385 ORTHO05D002245 5.0e-08 61.2 96 42.7
Gohir.A07G184100 Gossypium hirsutum HOM05D002385 ORTHO05D002245 5.0e-08 61.2 96 41.7
C05p03670 Brassica napus HOM05D002385 ORTHO05D002245 6.5e-08 60.8 95 37.9
FvH4_6g39683 Fragaria vesca HOM05D002385 ORTHO05D002245 6.5e-08 60.8 48 58.3
Actinidia39326 Actinidia chinensis HOM05D002385 ORTHO05D002245 8.5e-08 60.5 95 41.1
Ca_03672_v3 Cicer arietinum L. HOM05D002385 ORTHO05D002245 8.5e-08 60.5 96 42.7
Medtr2g069430 Medicago truncatula HOM05D002385 ORTHO05D002245 8.5e-08 60.5 96 38.5
AL4G27570 Arabidopsis lyrata HOM05D002385 ORTHO05D002245 1.1e-07 60.1 82 45.1
Lj3g0003491 Lotus japonicus HOM05D002385 ORTHO05D002245 1.1e-07 60.1 92 41.3
Oeu048060.1 Olea europaea HOM05D002385 ORTHO05D002245 1.1e-07 60.1 95 43.2
Phvul.005G057400 Phaseolus vulgaris HOM05D002385 ORTHO05D002245 1.1e-07 60.1 55 50.9
Psat6g029000 Pisum sativum HOM05D002385 ORTHO05D002245 1.1e-07 60.1 92 37.0
QL04p073236 Quercus lobata HOM05D002385 ORTHO05D337427 1.1e-07 60.1 98 37.8
THA.LOC104815717 Tarenaya hassleriana HOM05D014824 ORTHO05D002245 1.1e-07 60.1 94 38.3
Cfa023569 Carpinus fangiana HOM05D002385 ORTHO05D002245 1.5e-07 59.7 64 48.4
Eucgr.A00899 Eucalyptus grandis HOM05D002385 ORTHO05D002245 1.5e-07 59.7 97 43.3
Medtr2g069420 Medicago truncatula HOM05D002385 ORTHO05D002245 1.5e-07 59.7 92 38.0
TPR.G9734 Trifolium pratense HOM05D002385 ORTHO05D002245 1.5e-07 59.7 54 53.7
Eucgr.A00896 Eucalyptus grandis HOM05D002385 ORTHO05D002245 1.9e-07 59.3 96 40.6
Haze_13600 Corylus avellana HOM05D002385 ORTHO05D002245 2.5e-07 58.9 64 48.4
Oeu048064.1 Olea europaea HOM05D002385 ORTHO05D002245 3.2e-07 58.5 95 44.2
QL04p061381 Quercus lobata HOM05D002385 ORTHO05D002245 3.2e-07 58.5 80 45.0
Actinidia30458 Actinidia chinensis HOM05D002385 ORTHO05D002245 4.2e-07 58.2 95 41.1
Ca_03673_v3 Cicer arietinum L. HOM05D002385 ORTHO05D002245 4.2e-07 58.2 63 47.6
FAN14G0168 Fragaria x ananassa HOM05D002385 ORTHO05D002245 4.2e-07 58.2 54 51.9
Psat1g011360 Pisum sativum HOM05D002385 ORTHO05D002245 4.2e-07 58.2 92 37.0
QL04p061407 Quercus lobata HOM05D002385 ORTHO05D002245 4.2e-07 58.2 85 44.7
THA.LOC104826161 Tarenaya hassleriana HOM05D002385 ORTHO05D002245 4.2e-07 58.2 95 40.0
TWI60G1403 Tripterygium wilfordii HOM05D002385 ORTHO05D002245 4.2e-07 58.2 95 36.8
Haze_13597 Corylus avellana HOM05D002385 ORTHO05D002245 5.5e-07 57.8 80 45.0
FAN21G2635 Fragaria x ananassa HOM05D014462 ORTHO05D018947 5.5e-07 57.8 99 34.3
GSVIVG01015779001 Vitis vinifera HOM05D002385 ORTHO05D002245 5.5e-07 57.8 95 36.8
Dinv05962 Davidia involucrata HOM05D014462 ORTHO05D018947 7.2e-07 57.4 101 37.6
Dinv18438 Davidia involucrata HOM05D002385 ORTHO05D002245 7.2e-07 57.4 95 41.1
HanXRQChr11g0335361 Helianthus annuus HOM05D002385 ORTHO05D002245 7.2e-07 57.4 96 37.5
FAN16G2212 Fragaria x ananassa HOM05D014462 ORTHO05D018947 1.2e-06 56.6 99 33.3
HanXRQChr03g0078081 Helianthus annuus HOM05D002385 ORTHO05D002245 1.2e-06 56.6 95 35.8
Prupe.6G185400 Prunus persica HOM05D002385 ORTHO05D002245 1.6e-06 56.2 57 50.9
PGR031G2469 Punica granatum HOM05D002385 ORTHO05D002245 1.6e-06 56.2 90 43.3
Cfa023568 Carpinus fangiana HOM05D002385 ORTHO05D002245 2.1e-06 55.8 55 54.5
Glyma.08G171000 Glycine max HOM05D002385 ORTHO05D002245 2.1e-06 55.8 85 42.4
Lalb_Chr20g0108741 Lupinus albus HOM05D002385 ORTHO05D002245 2.1e-06 55.8 95 37.9
MD09G1137600 Malus domestica HOM05D002385 ORTHO05D002245 2.1e-06 55.8 62 48.4
Prupe.3G187200 Prunus persica HOM05D002385 ORTHO05D002245 2.1e-06 55.8 56 53.6
Prupe.6G185200 Prunus persica HOM05D002385 ORTHO05D002245 2.1e-06 55.8 78 44.9
QL04p061357 Quercus lobata HOM05D002385 ORTHO05D002245 2.1e-06 55.8 85 43.5
SGA_v2.0_scaffold181G39736 Striga asiatica HOM05D003210 ORTHO05D000001 2.1e-06 55.8 95 40.0
CARHR004830 Cardamine hirsuta HOM05D002385 ORTHO05D002245 2.7e-06 55.5 52 55.8
Haze_13594 Corylus avellana HOM05D002385 ORTHO05D002245 2.7e-06 55.5 64 43.8
Prupe.3G187300 Prunus persica HOM05D002385 ORTHO05D002245 2.7e-06 55.5 63 49.2
Cfa023571 Carpinus fangiana HOM05D002385 ORTHO05D002245 3.6e-06 55.1 64 46.9
Haze_13596 Corylus avellana HOM05D002385 ORTHO05D002245 3.6e-06 55.1 64 46.9
Lsat_1_v5_gn_1_82281 Lactuca sativa HOM05D019240 ORTHO05D002245 3.6e-06 55.1 95 36.8
RcHm_v2.0_Chr5g0019971 Rosa chinensis HOM05D014462 ORTHO05D018947 3.6e-06 55.1 105 32.4
Duzib138G1429 Durio zibethinus HOM05D002385 ORTHO05D002245 4.7e-06 54.7 88 40.9
MD17G1127900 Malus domestica HOM05D002385 ORTHO05D002245 6.1e-06 54.3 55 49.1
TAR627G0329 Trochodendron aralioides HOM05D002385 ORTHO05D002245 6.1e-06 54.3 54 53.7
AT2G32200 Arabidopsis thaliana HOM05D002385 ORTHO05D002245 8.0e-06 53.9 99 40.4
Carub.0001s0465 Capsella rubella HOM05D002385 ORTHO05D002245 8.0e-06 53.9 96 36.5
Cfa023028 Carpinus fangiana HOM05D002385 ORTHO05D002245 8.0e-06 53.9 82 43.9
Dinv02957 Davidia involucrata HOM05D002385 ORTHO05D002245 8.0e-06 53.9 96 39.6
Thhalv10009262m.g Eutrema salsugineum HOM05D002385 ORTHO05D002245 8.0e-06 53.9 95 40.0


User provided reference genes

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