Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G054500 Carya illinoinensis HOM05D007161 ORTHO05D009103 6.7e-76 287.7 201 100.0
QL10p019814 Quercus lobata HOM05D007161 ORTHO05D009103 6.4e-50 201.4 197 78.2
Haze_07737 Corylus avellana HOM05D007161 ORTHO05D009103 1.7e-47 193.4 201 77.6
Cfa019345 Carpinus fangiana HOM05D007161 ORTHO05D009103 8.6e-47 191.0 201 77.1
Dinv22772 Davidia involucrata HOM05D007161 ORTHO05D009103 2.3e-44 183.0 200 71.5
Manes.06G083700 Manihot esculenta HOM05D007161 ORTHO05D009103 4.9e-42 175.3 158 87.3
Ciclev10022373m.g Citrus clementina HOM05D007161 ORTHO05D009103 1.6e-40 170.2 167 77.2
Nitab4.5_0001485g0090 Nicotiana tabacum HOM05D007161 ORTHO05D009103 7.8e-40 167.9 174 78.2
CANSAT56G0131 Cannabis sativa HOM05D007161 ORTHO05D009103 2.3e-39 166.4 169 78.1
Atru.chr9.557 Acer truncatum HOM05D007161 ORTHO05D009103 5.1e-39 165.2 174 79.9
Potri.015G058600 Populus trichocarpa HOM05D007161 ORTHO05D009103 5.6e-38 161.8 158 83.5
CAN.G1228.16 Capsicum annuum HOM05D007161 ORTHO05D009103 2.8e-37 159.5 169 75.7
CsaV3_1G006050 Cucumis sativus L. HOM05D007161 ORTHO05D009103 1.1e-36 157.5 201 69.2
MELO3C002036.2 Cucumis melo HOM05D007161 ORTHO05D009103 1.8e-36 156.8 201 69.2
GSVIVG01008106001 Vitis vinifera HOM05D007161 ORTHO05D009103 1.8e-36 156.8 159 79.2
MSTRG.4482 Avicennia marina HOM05D007161 ORTHO05D009103 3.1e-36 156.0 167 73.7
Gohir.A07G068000 Gossypium hirsutum HOM05D007161 ORTHO05D009103 8.9e-36 154.5 202 67.8
Gohir.D07G072600 Gossypium hirsutum HOM05D007161 ORTHO05D009103 3.4e-35 152.5 202 67.3
Gorai.001G076800 Gossypium raimondii HOM05D007161 ORTHO05D009103 3.4e-35 152.5 202 67.3
PGR083G0667 Punica granatum HOM05D007161 ORTHO05D009103 5.8e-35 151.8 200 67.5
TAR629G0203 Trochodendron aralioides HOM05D007161 ORTHO05D009103 9.9e-35 151.0 200 65.5
Eucgr.B00604 Eucalyptus grandis HOM05D007161 ORTHO05D009103 1.3e-34 150.6 161 76.4
ClCG04G011740 Citrullus lanatus HOM05D007161 ORTHO05D009103 1.7e-34 150.2 201 69.7
Sabra15G0084100 Salix brachista HOM05D007161 ORTHO05D009103 2.2e-34 149.8 201 69.7
Sopen03g034090 Solanum pennellii HOM05D007161 ORTHO05D009103 3.7e-34 149.1 169 74.6
THA.LOC104801155 Tarenaya hassleriana HOM05D007161 ORTHO05D009103 6.4e-34 148.3 162 74.1
Cc00_g12110 Coffea canephora HOM05D007161 ORTHO05D009103 8.3e-34 147.9 158 75.3
Sed0004238 Sechium edule HOM05D007161 ORTHO05D009103 1.4e-33 147.1 173 74.0
PGSC0003DMG400024633 Solanum tuberosum HOM05D007161 ORTHO05D009103 1.9e-33 146.7 169 74.6
Thecc.03G103000 Theobroma cacao HOM05D007161 ORTHO05D009103 1.9e-33 146.7 202 66.8
Nn4g23440 Nelumbo nucifera HOM05D007161 ORTHO05D009103 5.4e-33 145.2 199 67.8
vmacro17616 Vaccinium macrocarpon HOM05D007161 ORTHO05D009103 5.4e-33 145.2 222 59.9
MSTRG.9598 Avicennia marina HOM05D007161 ORTHO05D009103 3.5e-32 142.5 166 71.1
arahy.Tifrunner.gnm1.ann1.N0KAAL Arachis hypogaea HOM05D007161 ORTHO05D009103 4.6e-32 142.1 196 64.8
Phvul.009G202100 Phaseolus vulgaris HOM05D007161 ORTHO05D009103 4.6e-32 142.1 174 71.8
Rhsim08G0144900 Rhododendron simsii HOM05D007161 ORTHO05D009103 4.6e-32 142.1 206 63.1
arahy.Tifrunner.gnm1.ann1.KM320G Arachis hypogaea HOM05D007161 ORTHO05D009103 7.8e-32 141.4 196 65.3
TWI60G0438 Tripterygium wilfordii HOM05D007161 ORTHO05D009103 7.8e-32 141.4 160 78.8
Glyma.04G161600 Glycine max HOM05D007161 ORTHO05D009103 3.9e-31 139.0 206 65.0
Peaxi162Scf00201g00331 Petunia axillaris HOM05D007161 ORTHO05D009103 1.1e-30 137.5 169 71.6
COL.COLO4_24339 Corchorus olitorius HOM05D007161 ORTHO05D009103 3.3e-30 136.0 160 75.0
Glyma.06G204200 Glycine max HOM05D007161 ORTHO05D009103 4.3e-30 135.6 171 71.3
TWI81G0640 Tripterygium wilfordii HOM05D007161 ORTHO05D009103 4.3e-30 135.6 163 76.1
CSS0029825 Camellia sinensis var. sinensis HOM05D007161 ORTHO05D009103 7.3e-30 134.8 161 73.3
CSS0009196 Camellia sinensis var. sinensis HOM05D007161 ORTHO05D009103 9.5e-30 134.4 144 78.5
Hund02576 Selenicereus undatus HOM05D007161 ORTHO05D009103 1.2e-29 134.0 164 71.3
Solyc03g115020.3 Solanum lycopersicum HOM05D007161 ORTHO05D009103 1.2e-29 134.0 169 71.6
Prupe.5G206100 Prunus persica HOM05D007161 ORTHO05D009103 1.6e-29 133.7 200 64.0
Ca_14363_v3 Cicer arietinum L. HOM05D007161 ORTHO05D009103 2.1e-29 133.3 175 69.7
TPR.G12153 Trifolium pratense HOM05D007161 ORTHO05D009103 3.6e-29 132.5 199 65.8
Psat5g207080 Pisum sativum HOM05D007161 ORTHO05D009103 8.1e-29 131.3 172 71.5
Duzib084G1357 Durio zibethinus HOM05D007161 ORTHO05D009103 1.4e-28 130.6 203 62.1
DCAR_011565 Daucus carota HOM05D007161 ORTHO05D009103 4.0e-28 129.0 164 70.7
ATR0177G008 Amborella trichopoda HOM05D007161 ORTHO05D009103 6.8e-28 128.3 201 59.7
Medtr3g026020 Medicago truncatula HOM05D007161 ORTHO05D009103 2.0e-27 126.7 172 69.8
MD06G1225900 Malus domestica HOM05D007161 ORTHO05D009103 7.6e-27 124.8 205 62.9
Sc11g0004490 Simmondsia chinensis HOM05D007161 ORTHO05D009103 9.9e-27 124.4 190 61.1
MD14G1212800 Malus domestica HOM05D007161 ORTHO05D009103 1.7e-26 123.6 174 68.4
Oeu017188.1 Olea europaea HOM05D007161 ORTHO05D009103 1.7e-26 123.6 141 73.8
RcHm_v2.0_Chr7g0183201 Rosa chinensis HOM05D007161 ORTHO05D009103 2.2e-26 123.2 160 71.2
SalBow7G4182 Salvia bowleyana HOM05D007161 ORTHO05D009103 6.4e-26 121.7 167 66.5
SGA_v2.0_scaffold42G16039 Striga asiatica HOM05D007161 ORTHO05D009103 8.4e-26 121.3 167 68.3
CDE05G0262 Ceratophyllum demersum HOM05D007161 ORTHO05D009103 4.2e-25 119.0 167 69.5
BolC3t12938H Brassica oleracea HOM05D007161 ORTHO05D009103 5.4e-25 118.6 163 68.1
PSO017G0728 Papaver somniferum HOM05D007161 ORTHO05D009103 5.4e-25 118.6 167 67.7
PSO478G3435 Papaver somniferum HOM05D007161 ORTHO05D009103 7.1e-25 118.2 170 65.9
Aqoxy3G03679 Aquilegia oxysepala HOM05D007161 ORTHO05D009103 9.2e-25 117.9 197 58.9
BcaB01g05640 Brassica carinata HOM05D007161 ORTHO05D009103 9.2e-25 117.9 163 66.9
A03p03560 Brassica napus HOM05D007161 ORTHO05D009103 1.2e-24 117.5 163 66.9
BraA03t09706Z Brassica rapa HOM05D007161 ORTHO05D009103 1.2e-24 117.5 163 66.9
C03p04010 Brassica napus HOM05D007161 ORTHO05D009103 2.1e-24 116.7 163 66.9
Lj1g0027416 Lotus japonicus HOM05D007161 ORTHO05D009103 2.1e-24 116.7 174 67.2
Ah.02g114100 Amaranthus hybridus HOM05D007161 ORTHO05D009103 4.6e-24 115.5 165 66.1
EL10Ac5g11145 Beta vulgaris HOM05D007161 ORTHO05D009103 4.6e-24 115.5 164 68.3
ECA246G0920 Erigeron canadensis HOM05D007161 ORTHO05D009103 1.7e-23 113.6 163 68.1
FAN13G1189 Fragaria x ananassa HOM05D007161 ORTHO05D009103 2.3e-23 113.2 142 75.4
FvH4_5g13740 Fragaria vesca HOM05D007161 ORTHO05D009103 3.0e-23 112.8 140 75.7
Nitab4.5_0007356g0010 Nicotiana tabacum HOM05D007161 ORTHO05D009103 3.0e-23 112.8 123 82.1
FAN18G1870 Fragaria x ananassa HOM05D007161 ORTHO05D009103 3.9e-23 112.5 140 75.7
Oeu044879.1 Olea europaea HOM05D007161 ORTHO05D009103 5.1e-23 112.1 141 75.9
FAN08G2338 Fragaria x ananassa HOM05D007161 ORTHO05D009103 6.6e-23 111.7 138 76.8
BcaB01g05681 Brassica carinata HOM05D007161 ORTHO05D009103 8.7e-23 111.3 164 66.5
CDE02G4042 Ceratophyllum demersum HOM05D005465 ORTHO05D006612 4.3e-22 109.0 160 66.9
Lsat_1_v5_gn_5_22381 Lactuca sativa HOM05D007161 ORTHO05D009103 4.3e-22 109.0 164 68.3
Migut.D01637 Erythranthe guttata HOM05D007161 ORTHO05D009103 1.6e-21 107.1 167 66.5
Carub.0006s0694 Capsella rubella HOM05D007161 ORTHO05D009103 2.1e-21 106.7 161 62.7
Os12g0575000 Oryza sativa ssp. japonica HOM05D007161 ORTHO05D009103 2.1e-21 106.7 199 55.8
Sp6g34900 Schrenkiella parvula HOM05D007161 ORTHO05D009103 2.1e-21 106.7 178 58.4
CARHR205130 Cardamine hirsuta HOM05D007161 ORTHO05D009103 1.8e-20 103.6 166 59.6
Aa31LG3G18490 Aethionema arabicum HOM05D007161 ORTHO05D009103 3.1e-20 102.8 163 62.0
Lj5C102G4 Lonicera japonica HOM05D007161 ORTHO05D009103 3.1e-20 102.8 166 66.9
Zm00001eb029520 Zea mays HOM05D007161 ORTHO05D009103 3.1e-20 102.8 166 62.7
HanXRQChr08g0230491 Helianthus annuus HOM05D007161 ORTHO05D009103 4.0e-20 102.4 163 66.9
Thhalv10014904m.g Eutrema salsugineum HOM05D007161 ORTHO05D009103 1.5e-19 100.5 163 61.3
Lalb_Chr12g0199331 Lupinus albus HOM05D007161 ORTHO05D009103 3.4e-19 99.4 151 68.2
AL6G18400 Arabidopsis lyrata HOM05D007161 ORTHO05D009103 2.2e-18 96.7 164 60.4
HanXRQChr17g0550221 Helianthus annuus HOM05D007161 ORTHO05D009103 4.9e-18 95.5 64 75.0
SEGI_08112 Sequoiadendron giganteum HOM05D007161 ORTHO05D009103 1.9e-17 93.6 202 53.5
Actinidia04818 Actinidia chinensis HOM05D007161 ORTHO05D009103 2.4e-17 93.2 162 63.0
AT5G08050 Arabidopsis thaliana HOM05D007161 ORTHO05D009103 3.2e-17 92.8 164 59.8
AUR62008547 Chenopodium quinoa HOM05D007161 ORTHO05D009103 1.6e-16 90.5 198 55.1
AUR62021546 Chenopodium quinoa HOM05D007161 ORTHO05D009103 4.6e-16 89.0 116 76.7
AagrBONN_evm.TU.Sc2ySwM_344.2890 Anthoceros agrestis HOM05D007161 ORTHO05D009103 1.7e-15 87.0 124 72.6
Os11g0460900 Oryza sativa ssp. japonica HOM05D007161 ORTHO05D009103 3.0e-15 86.3 166 36.7
Mapoly0107s0029 Marchantia polymorpha HOM05D007161 ORTHO05D009103 1.9e-14 83.6 176 56.8
Peaxi162Scf00009g00010 Petunia axillaris HOM05D007161 ORTHO05D009103 8.1e-13 78.2 77 54.5
SMO139G0085 Selaginella moellendorffii HOM05D007161 ORTHO05D009103 8.1e-13 78.2 119 66.4
Pp3c1_19210 Physcomitrium patens HOM05D007161 ORTHO05D009103 9.0e-12 74.7 148 59.5
unitig_0.g5 Utricularia gibba HOM05D000887 ORTHO05D000908 6.4e-10 68.6 128 70.3


User provided reference genes

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