Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G048500 Carya illinoinensis HOM05D007878 ORTHO05D010022 3.1e-270 934.9 587 100.0
CiPaw.11G048800 Carya illinoinensis HOM05D007878 ORTHO05D010022 1.5e-192 676.8 582 73.5
Duzib084G0698 Durio zibethinus HOM05D007878 ORTHO05D010022 4.1e-113 412.9 586 47.6
Cfa019282 Carpinus fangiana HOM05D007878 ORTHO05D010022 2.3e-108 397.1 587 50.8
Prupe.5G199300 Prunus persica HOM05D007878 ORTHO05D010022 2.0e-107 394.0 584 46.4
FAN18G1316 Fragaria x ananassa HOM05D007878 ORTHO05D010022 3.8e-103 379.8 610 44.4
FAN08G0929 Fragaria x ananassa HOM05D007878 ORTHO05D010022 5.0e-103 379.4 600 44.8
FAN13G2185 Fragaria x ananassa HOM05D007878 ORTHO05D010022 1.9e-102 377.5 605 45.6
TAR374G1173 Trochodendron aralioides HOM05D007878 ORTHO05D010022 5.5e-102 375.9 604 45.4
QL10p018347 Quercus lobata HOM05D007878 ORTHO05D010022 1.0e-100 371.7 526 49.8
Potri.015G061500 Populus trichocarpa HOM05D007878 ORTHO05D010022 4.4e-99 366.3 552 46.2
Atru.chr9.783 Acer truncatum HOM05D007878 ORTHO05D010022 7.0e-97 359.0 571 43.8
Thecc.03G095300 Theobroma cacao HOM05D007878 ORTHO05D010022 1.2e-96 358.2 588 44.7
RcHm_v2.0_Chr7g0182231 Rosa chinensis HOM05D007878 ORTHO05D010022 5.0e-95 352.8 575 43.8
FvH4_5g14430 Fragaria vesca HOM05D007878 ORTHO05D010022 1.6e-93 347.8 610 44.3
MD14G1206000 Malus domestica HOM05D007878 ORTHO05D010022 4.0e-92 343.2 588 41.8
Actinidia04859 Actinidia chinensis HOM05D007878 ORTHO05D010022 3.3e-91 340.1 583 42.9
COL.COLO4_38427 Corchorus olitorius HOM05D007878 ORTHO05D010022 3.5e-88 330.1 583 48.4
Dinv38757 Davidia involucrata HOM05D007878 ORTHO05D010022 5.9e-88 329.3 596 42.6
Nn4g23313 Nelumbo nucifera HOM05D007878 ORTHO05D010022 1.1e-86 325.1 587 40.4
PGR083G0831 Punica granatum HOM05D007878 ORTHO05D010022 1.2e-83 315.1 588 42.2
Actinidia09234 Actinidia chinensis HOM05D007878 ORTHO05D010022 4.4e-83 313.2 583 41.3
Manes.14G082500 Manihot esculenta HOM05D007878 ORTHO05D010022 1.1e-81 308.5 586 40.8
Aqoxy3G03537 Aquilegia oxysepala HOM05D007878 ORTHO05D010022 2.0e-80 304.3 596 39.3
Ciclev10024608m.g Citrus clementina HOM05D007878 ORTHO05D010022 5.5e-78 296.2 584 38.5
TWI60G1109 Tripterygium wilfordii HOM05D007878 ORTHO05D010022 3.6e-77 293.5 583 37.2
MBI16_g14990_MAGBIO Magnolia biondii HOM05D007878 ORTHO05D010022 8.8e-76 288.9 566 39.9
Cc04_g14870 Coffea canephora HOM05D007878 ORTHO05D010022 9.8e-75 285.4 592 37.5
MD06G1198500 Malus domestica HOM05D007878 ORTHO05D010022 2.2e-74 284.3 582 43.1
Gohir.A03G068300 Gossypium hirsutum HOM05D007878 ORTHO05D010022 2.4e-73 280.8 583 36.0
Gohir.D03G094900 Gossypium hirsutum HOM05D007878 ORTHO05D010022 9.2e-73 278.9 583 36.2
CAN.G479.49 Capsicum annuum HOM05D007878 ORTHO05D010022 2.0e-72 277.7 587 39.7
Oeu031812.2 Olea europaea HOM05D007878 ORTHO05D010022 3.8e-71 273.5 584 37.7
ClCG06G015920 Citrullus lanatus HOM05D007878 ORTHO05D010022 8.6e-71 272.3 567 38.1
Manes.06G088500 Manihot esculenta HOM05D007878 ORTHO05D010022 6.1e-69 266.2 597 36.7
Sed0013205 Sechium edule HOM05D007878 ORTHO05D010022 3.2e-65 253.8 583 36.9
MELO3C017199.2 Cucumis melo HOM05D007878 ORTHO05D010022 3.6e-61 240.4 576 36.5
GSVIVG01007952001 Vitis vinifera HOM05D007878 ORTHO05D010022 6.2e-61 239.6 470 41.1
PGSC0003DMG400024662 Solanum tuberosum HOM05D007878 ORTHO05D010022 2.3e-60 237.7 585 34.9
Phvul.003G187300 Phaseolus vulgaris HOM05D007878 ORTHO05D010022 8.9e-60 235.7 579 34.7
Nitab4.5_0002756g0040 Nicotiana tabacum HOM05D007878 ORTHO05D010022 3.4e-59 233.8 583 34.5
Glyma.17G103300 Glycine max HOM05D007878 ORTHO05D010022 4.4e-59 233.4 567 35.1
Sopen03g034610 Solanum pennellii HOM05D007878 ORTHO05D010022 4.4e-59 233.4 586 34.6
DCAR_016585 Daucus carota HOM05D007878 ORTHO05D010022 5.8e-59 233.0 586 33.3
Gorai.003G099100 Gossypium raimondii HOM05D007878 ORTHO05D010022 1.3e-58 231.9 548 34.1
CsaV3_1G002630 Cucumis sativus L. HOM05D007878 ORTHO05D010022 1.7e-58 231.5 572 35.8
Solyc03g115620.2 Solanum lycopersicum HOM05D007878 ORTHO05D010022 2.2e-58 231.1 586 35.0
Haze_07666 Corylus avellana HOM05D007878 ORTHO05D010022 8.3e-58 229.2 536 36.9
PSO063G3897 Papaver somniferum HOM05D007878 ORTHO05D010022 3.2e-57 227.3 583 32.9
Nn3g17364 Nelumbo nucifera HOM05D007878 ORTHO05D010022 9.2e-57 225.7 424 41.0
Medtr4g109150 Medicago truncatula HOM05D007878 ORTHO05D010022 2.7e-56 224.2 569 34.4
CANSAT80G1712 Cannabis sativa HOM05D007878 ORTHO05D010022 3.9e-55 220.3 589 32.6
Lj4g0012809 Lotus japonicus HOM05D007878 ORTHO05D010022 1.5e-54 218.4 566 33.9
Nitab4.5_0001211g0090 Nicotiana tabacum HOM05D007878 ORTHO05D010022 1.8e-52 211.5 545 34.3
ECA246G4297 Erigeron canadensis HOM05D007878 ORTHO05D010022 4.9e-50 203.4 541 34.0
Ca_21797_v3 Cicer arietinum L. HOM05D007878 ORTHO05D010022 6.4e-50 203.0 534 33.9
Peaxi162Scf00274g00029 Petunia axillaris HOM05D007878 ORTHO05D010022 9.2e-49 199.1 593 32.4
Migut.I00229 Erythranthe guttata HOM05D007878 ORTHO05D010022 2.7e-48 197.6 589 32.3
arahy.Tifrunner.gnm1.ann1.3W98EY Arachis hypogaea HOM05D007878 ORTHO05D010022 5.1e-47 193.4 567 33.0
Eucgr.B00555 Eucalyptus grandis HOM05D007878 ORTHO05D010022 9.9e-43 179.1 477 33.5
HanXRQChr05g0157141 Helianthus annuus HOM05D007878 ORTHO05D010022 9.9e-43 179.1 504 33.1
Oeu046990.1 Olea europaea HOM05D007878 ORTHO05D010022 4.9e-42 176.8 559 31.8
TPR.G1999 Trifolium pratense HOM05D007878 ORTHO05D010022 9.2e-41 172.6 564 31.2
Psat4g049000 Pisum sativum HOM05D007878 ORTHO05D010022 2.4e-36 157.9 563 29.1
Cpa.g.sc13.307 Carica papaya HOM05D007878 ORTHO05D010022 4.0e-36 157.1 542 29.3
Oeu052466.1 Olea europaea HOM05D007878 ORTHO05D010022 1.7e-34 151.8 561 29.6
Oeu052465.1 Olea europaea HOM05D007878 ORTHO05D010022 2.9e-34 151.0 561 29.6
DCAR_021514 Daucus carota HOM05D007878 ORTHO05D010022 4.9e-34 150.2 321 36.8
Oeu047269.3 Olea europaea HOM05D007878 ORTHO05D010022 8.4e-34 149.4 529 32.3
CSS0029238 Camellia sinensis var. sinensis HOM05D000957 ORTHO05D000754 1.7e-31 141.7 513 31.2
arahy.Tifrunner.gnm1.ann1.QT4JJ4 Arachis hypogaea HOM05D007878 ORTHO05D010022 8.1e-29 132.9 500 30.0
Lsat_1_v5_gn_5_21161 Lactuca sativa HOM05D007878 ORTHO05D010022 6.9e-28 129.8 385 31.9
DCAR_026030 Daucus carota HOM05D000094 ORTHO05D003883 9.3e-25 119.4 252 37.3
Atru.chr9.308 Acer truncatum HOM05D007878 ORTHO05D010022 2.1e-24 118.2 178 44.4
ATR0730G174 Amborella trichopoda HOM05D007878 ORTHO05D010022 6.0e-24 116.7 600 27.0
MSTRG.22991 Avicennia marina HOM05D007878 ORTHO05D010022 7.1e-17 93.2 144 47.9
Sabra15G0086500 Salix brachista HOM05D007878 ORTHO05D010022 1.5e-11 75.5 129 43.4
Glyma.02G301400 Glycine max HOM05D001827 ORTHO05D001790 1.7e-10 72.0 625 23.0
arahy.Tifrunner.gnm1.ann1.0CJ0KN Arachis hypogaea HOM05D007878 ORTHO05D010022 3.8e-10 70.9 230 32.6
arahy.Tifrunner.gnm1.ann1.H3BYSM Arachis hypogaea HOM05D007878 ORTHO05D010022 3.8e-10 70.9 230 32.2
Eucgr.L01393 Eucalyptus grandis HOM05D001827 ORTHO05D001790 9.3e-09 66.2 564 22.9
Eucgr.E03845 Eucalyptus grandis HOM05D001827 ORTHO05D001790 7.9e-08 63.2 564 22.7
Sed0007556 Sechium edule HOM05D001827 ORTHO05D001790 7.9e-08 63.2 312 27.2
Aa31LG3G11780 Aethionema arabicum HOM05D001827 ORTHO05D001790 1.0e-07 62.8 596 24.3
Aa31LG5G11980 Aethionema arabicum HOM05D001812 ORTHO05D001874 3.9e-07 60.8 617 21.7
Zm00001eb133280 Zea mays HOM05D001827 ORTHO05D001790 6.7e-07 60.1 190 32.1
Cfa016913 Carpinus fangiana HOM05D001827 ORTHO05D001790 8.7e-07 59.7 398 24.1
Atru.chr1.2237 Acer truncatum HOM05D001827 ORTHO05D001790 3.3e-06 57.8 559 22.9
CDE02G3428 Ceratophyllum demersum HOM05D001827 ORTHO05D001790 3.3e-06 57.8 611 21.8
PSO210G4928 Papaver somniferum HOM05D001827 ORTHO05D001790 4.3e-06 57.4 401 22.9


User provided reference genes

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