Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G046200 Carya illinoinensis HOM05D007067 ORTHO05D008864 2.1e-100 369.0 181 100.0
Cfa018925 Carpinus fangiana HOM05D007067 ORTHO05D008864 6.1e-84 314.3 180 85.6
QL10p017305 Quercus lobata HOM05D007067 ORTHO05D008864 2.8e-81 305.4 180 81.7
GSVIVG01004672001 Vitis vinifera HOM05D007067 ORTHO05D008864 8.8e-75 283.9 182 74.7
GSVIVG01005334001 Vitis vinifera HOM05D007067 ORTHO05D008864 8.8e-75 283.9 182 74.7
CSS0040643 Camellia sinensis var. sinensis HOM05D007067 ORTHO05D008864 7.4e-74 280.8 180 73.9
Prupe.5G195500 Prunus persica HOM05D007067 ORTHO05D008864 2.6e-71 272.3 185 73.0
Manes.06G091000 Manihot esculenta HOM05D007067 ORTHO05D008864 3.5e-71 271.9 182 73.6
Rhsim08G0153200 Rhododendron simsii HOM05D007067 ORTHO05D008864 1.3e-70 270.0 180 71.1
Actinidia04879 Actinidia chinensis HOM05D007067 ORTHO05D008864 2.2e-70 269.2 183 71.6
MD06G1195600 Malus domestica HOM05D007067 ORTHO05D008864 5.0e-70 268.1 183 72.7
TAR622G0622 Trochodendron aralioides HOM05D007067 ORTHO05D008864 6.5e-70 267.7 182 70.3
Potri.012G068500 Populus trichocarpa HOM05D007067 ORTHO05D008864 1.1e-69 266.9 181 69.6
TWI60G1483 Tripterygium wilfordii HOM05D007067 ORTHO05D008864 5.5e-69 264.6 181 71.3
MD14G1202700 Malus domestica HOM05D007067 ORTHO05D008864 7.2e-69 264.2 183 72.7
Cc04_g16320 Coffea canephora HOM05D007067 ORTHO05D008864 2.7e-68 262.3 181 71.3
FAN08G0270 Fragaria x ananassa HOM05D007067 ORTHO05D008864 2.7e-68 262.3 186 70.4
FAN13G0188 Fragaria x ananassa HOM05D007067 ORTHO05D008864 4.7e-68 261.5 185 69.7
FAN18G1220 Fragaria x ananassa HOM05D007067 ORTHO05D008864 1.4e-67 260.0 185 69.7
Nn3g17293 Nelumbo nucifera HOM05D007067 ORTHO05D008864 1.4e-67 260.0 181 68.0
RcHm_v2.0_Chr7g0181701 Rosa chinensis HOM05D007067 ORTHO05D008864 3.0e-67 258.8 185 70.3
Sabra12G0047100 Salix brachista HOM05D007067 ORTHO05D008864 2.0e-66 256.1 181 69.1
vmacro17532 Vaccinium macrocarpon HOM05D007067 ORTHO05D008864 2.6e-66 255.8 180 67.8
MBI02_g12272_MAGBIO Magnolia biondii HOM05D007067 ORTHO05D008864 1.7e-65 253.1 182 67.6
Duzib205G1209 Durio zibethinus HOM05D007067 ORTHO05D008864 2.8e-65 252.3 188 70.2
Nitab4.5_0003381g0030 Nicotiana tabacum HOM05D007067 ORTHO05D008864 2.8e-65 252.3 180 70.6
Nitab4.5_0005226g0040 Nicotiana tabacum HOM05D007067 ORTHO05D008864 2.4e-64 249.2 180 69.4
CANSAT56G4102 Cannabis sativa HOM05D007067 ORTHO05D008864 5.9e-63 244.6 185 69.7
CAN.G846.12 Capsicum annuum HOM05D007067 ORTHO05D008864 5.9e-63 244.6 180 67.8
MSTRG.9621 Avicennia marina HOM05D007067 ORTHO05D008864 6.5e-62 241.1 182 64.8
MELO3C017182.2 Cucumis melo HOM05D007067 ORTHO05D008864 6.5e-62 241.1 181 68.0
Lj1g0007284 Lotus japonicus HOM05D007067 ORTHO05D008864 1.9e-61 239.6 182 65.4
CsaV3_1G002440 Cucumis sativus L. HOM05D007067 ORTHO05D008864 2.5e-61 239.2 181 68.0
Thecc.03G091100 Theobroma cacao HOM05D007067 ORTHO05D008864 4.2e-61 238.4 186 65.6
Phvul.009G186200 Phaseolus vulgaris HOM05D007067 ORTHO05D008864 9.4e-61 237.3 182 67.0
DCAR_016569 Daucus carota HOM05D007067 ORTHO05D008864 1.6e-60 236.5 184 66.8
Lalb_Chr08g0235641 Lupinus albus HOM05D007067 ORTHO05D008864 2.1e-60 236.1 187 64.2
ClCG06G016120 Citrullus lanatus HOM05D007067 ORTHO05D008864 2.7e-60 235.7 182 66.5
Dinv38731 Davidia involucrata HOM05D007067 ORTHO05D008864 2.7e-60 235.7 181 65.7
Glyma.04G167400 Glycine max HOM05D007067 ORTHO05D008864 2.7e-60 235.7 182 64.8
Sed0012968 Sechium edule HOM05D007067 ORTHO05D008864 2.7e-60 235.7 182 67.0
Glyma.06G195200 Glycine max HOM05D007067 ORTHO05D008864 8.0e-60 234.2 182 63.7
Peaxi162Scf00106g00326 Petunia axillaris HOM05D007067 ORTHO05D008864 8.0e-60 234.2 171 67.3
TPR.G11876 Trifolium pratense HOM05D007067 ORTHO05D008864 1.4e-59 233.4 181 64.1
Eucgr.K02487 Eucalyptus grandis HOM05D007067 ORTHO05D008864 8.8e-59 230.7 182 64.3
SalBow3G2729 Salvia bowleyana HOM05D007067 ORTHO05D008864 8.8e-59 230.7 181 65.7
Migut.D01803 Erythranthe guttata HOM05D007067 ORTHO05D008864 1.2e-58 230.3 185 63.8
Cpa.g.sc111.20 Carica papaya HOM05D007067 ORTHO05D008864 1.5e-58 229.9 181 66.3
Gorai.003G097800 Gossypium raimondii HOM05D007067 ORTHO05D008864 1.5e-58 229.9 183 67.2
Gohir.A03G067300 Gossypium hirsutum HOM05D007067 ORTHO05D008864 2.0e-58 229.6 183 67.2
Gohir.D03G093800 Gossypium hirsutum HOM05D007067 ORTHO05D008864 3.3e-58 228.8 183 66.7
Atru.chr9.195 Acer truncatum HOM05D007067 ORTHO05D008864 7.5e-58 227.6 182 64.8
Ca_27682_v3 Cicer arietinum L. HOM05D007067 ORTHO05D008864 1.7e-57 226.5 181 61.3
arahy.Tifrunner.gnm1.ann1.JMB3VF Arachis hypogaea HOM05D007067 ORTHO05D008864 4.8e-57 224.9 180 65.0
arahy.Tifrunner.gnm1.ann1.V8ZK3N Arachis hypogaea HOM05D007067 ORTHO05D008864 4.8e-57 224.9 180 65.0
CDE02G3919 Ceratophyllum demersum HOM05D007067 ORTHO05D008864 1.4e-56 223.4 184 63.0
HanXRQChr05g0156061 Helianthus annuus HOM05D007067 ORTHO05D008864 1.4e-56 223.4 180 66.7
Medtr3g435320 Medicago truncatula HOM05D007067 ORTHO05D008864 1.2e-55 220.3 180 62.8
EL10Ac5g11044 Beta vulgaris HOM05D007067 ORTHO05D008864 2.0e-55 219.5 183 61.2
Hma1.2p1_0637F.1_g193620 Hydrangea macrophylla HOM05D007067 ORTHO05D008864 2.0e-55 219.5 129 81.4
Lj5A109T72 Lonicera japonica HOM05D007067 ORTHO05D008864 4.5e-55 218.4 148 73.0
Psat5g201280 Pisum sativum HOM05D007067 ORTHO05D008864 1.0e-54 217.2 181 61.9
Aqoxy3G00483 Aquilegia oxysepala HOM05D007067 ORTHO05D008864 1.7e-54 216.5 182 62.1
PGSC0003DMG400021933 Solanum tuberosum HOM05D007067 ORTHO05D008864 1.1e-53 213.8 176 63.6
unitig_0.g778 Utricularia gibba HOM05D007067 ORTHO05D008864 1.9e-53 213.0 183 60.1
PSO063G5395 Papaver somniferum HOM05D007067 ORTHO05D008864 7.2e-53 211.1 189 60.3
PSO832G0421 Papaver somniferum HOM05D007067 ORTHO05D008864 9.4e-53 210.7 189 60.3
Sopen12g016290 Solanum pennellii HOM05D007067 ORTHO05D008864 2.7e-52 209.1 177 63.8
Solyc12g036170.2 Solanum lycopersicum HOM05D007067 ORTHO05D008864 6.1e-52 208.0 175 64.6
Eucgr.K02485 Eucalyptus grandis HOM05D007067 ORTHO05D008864 1.2e-50 203.8 168 60.1
ECA246G0430 Erigeron canadensis HOM05D007067 ORTHO05D008864 1.5e-50 203.4 183 60.1
C08p43060 Brassica napus HOM05D007067 ORTHO05D008864 2.0e-50 203.0 149 69.8
AUR62008437 Chenopodium quinoa HOM05D007067 ORTHO05D008864 5.7e-50 201.4 128 76.6
BcaB07g31890 Brassica carinata HOM05D007067 ORTHO05D008864 3.7e-49 198.7 182 59.3
A09p59720 Brassica napus HOM05D007067 ORTHO05D008864 6.3e-49 198.0 149 68.5
BraA09t41348Z Brassica rapa HOM05D007067 ORTHO05D008864 6.3e-49 198.0 149 68.5
THA.LOC104808257 Tarenaya hassleriana HOM05D007067 ORTHO05D008864 6.3e-49 198.0 130 76.9
Sp1g16740 Schrenkiella parvula HOM05D007067 ORTHO05D008864 8.3e-49 197.6 182 59.3
AT1G18730 Arabidopsis thaliana HOM05D007067 ORTHO05D008864 1.1e-48 197.2 188 59.6
C05p17040 Brassica napus HOM05D007067 ORTHO05D008864 1.4e-48 196.8 188 59.6
BolC5t30410H Brassica oleracea HOM05D007067 ORTHO05D008864 1.4e-48 196.8 188 59.6
Lsat_1_v5_gn_5_20880 Lactuca sativa HOM05D007067 ORTHO05D008864 1.4e-48 196.8 146 70.5
A06p14840 Brassica napus HOM05D007067 ORTHO05D008864 1.8e-48 196.4 188 59.6
BraA06t24606Z Brassica rapa HOM05D007067 ORTHO05D008864 1.8e-48 196.4 188 59.6
MBI02_g23462_MAGBIO Magnolia biondii HOM05D007067 ORTHO05D008864 1.8e-48 196.4 182 57.1
AL1G31200 Arabidopsis lyrata HOM05D007067 ORTHO05D008864 3.1e-48 195.7 188 59.0
BcaC05g25773 Brassica carinata HOM05D007067 ORTHO05D008864 3.1e-48 195.7 128 76.6
CDE09G1053 Ceratophyllum demersum HOM05D007067 ORTHO05D008864 3.1e-48 195.7 121 74.4
Thhalv10008902m.g Eutrema salsugineum HOM05D007067 ORTHO05D008864 3.1e-48 195.7 128 76.6
Carub.0001s1838 Capsella rubella HOM05D007067 ORTHO05D008864 4.1e-48 195.3 128 76.6
PGR044G1431 Punica granatum HOM05D007067 ORTHO05D008864 4.1e-48 195.3 188 59.0
CARHR019370 Cardamine hirsuta HOM05D007067 ORTHO05D008864 9.1e-48 194.1 128 75.8
BcaB03g14481 Brassica carinata HOM05D007067 ORTHO05D008864 1.6e-47 193.4 128 75.8
ATR0564G121 Amborella trichopoda HOM05D007067 ORTHO05D008864 1.0e-46 190.7 188 57.4
BolC8t51861H Brassica oleracea HOM05D007067 ORTHO05D008864 1.7e-46 189.9 134 73.1
Peaxi162Scf00106g00037 Petunia axillaris HOM05D007067 ORTHO05D008864 1.6e-44 183.3 111 80.2
Aa31LG7G3520 Aethionema arabicum HOM05D007067 ORTHO05D008864 2.3e-43 179.5 118 71.2
COL.COLO4_28333 Corchorus olitorius HOM05D007067 ORTHO05D008864 3.7e-41 172.2 184 53.8
AUR62021654 Chenopodium quinoa HOM05D007067 ORTHO05D008864 2.4e-40 169.5 148 58.8
Ciclev10022880m.g Citrus clementina HOM05D007067 ORTHO05D008864 1.5e-37 160.2 114 62.3
FvH4_5g14690 Fragaria vesca HOM05D007067 ORTHO05D008864 9.5e-37 157.5 124 62.9
Zm00001eb254450 Zea mays HOM05D007067 ORTHO05D008864 4.7e-36 155.2 161 52.2
Rhsim08G0153500 Rhododendron simsii HOM05D007067 ORTHO05D008864 5.2e-35 151.8 174 49.4
Os02g0744000 Oryza sativa ssp. japonica HOM05D007067 ORTHO05D008864 2.6e-34 149.4 132 59.8
BcaC07g41296 Brassica carinata HOM05D007067 ORTHO05D008864 7.8e-31 137.9 110 61.8
Haze_07309 Corylus avellana HOM05D007067 ORTHO05D008864 7.8e-31 137.9 180 48.3
SEGI_39094 Sequoiadendron giganteum HOM05D007067 ORTHO05D008864 1.8e-27 126.7 148 49.3
Manes.06G090801 Manihot esculenta HOM05D007067 ORTHO05D008864 2.4e-24 116.3 96 63.5
CBR_g30507 Chara braunii HOM05D007067 ORTHO05D008864 5.2e-19 98.6 94 53.2
Mapoly0149s0008 Marchantia polymorpha HOM05D007067 ORTHO05D008864 4.9e-17 92.0 100 46.0
Pp3c16_3930 Physcomitrium patens HOM05D007067 ORTHO05D008864 9.2e-16 87.8 154 38.3
Ah.11g048310 Amaranthus hybridus HOM05D007067 ORTHO05D008864 1.2e-12 77.4 99 46.5
COL.COLO4_28352 Corchorus olitorius HOM05D004600 ORTHO05D005471 3.4e-10 69.3 61 65.6
Rhsim08G0168600 Rhododendron simsii HOM05D000306 ORTHO05D023263 8.7e-06 54.7 37 81.1


User provided reference genes

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