Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G045800 Carya illinoinensis HOM05D004915 ORTHO05D006048 6.8e-156 553.9 271 100.0
Cfa018930 Carpinus fangiana HOM05D004915 ORTHO05D006048 4.5e-123 444.9 270 83.0
QL10p017218 Quercus lobata HOM05D004915 ORTHO05D006048 4.2e-121 438.3 271 79.7
Haze_07314 Corylus avellana HOM05D004915 ORTHO05D006048 2.8e-117 425.6 305 72.8
Thecc.03G090400 Theobroma cacao HOM05D004915 ORTHO05D006048 5.5e-113 411.4 257 77.0
RcHm_v2.0_Chr7g0181591 Rosa chinensis HOM05D004915 ORTHO05D006048 1.2e-112 410.2 269 72.9
Duzib205G1074 Durio zibethinus HOM05D004915 ORTHO05D006048 7.9e-112 407.5 257 75.5
Prupe.5G195000 Prunus persica HOM05D004915 ORTHO05D006048 1.0e-111 407.1 270 72.6
COL.COLO4_22946 Corchorus olitorius HOM05D004915 ORTHO05D006048 1.3e-111 406.8 244 78.7
GSVIVG01007990001 Vitis vinifera HOM05D004915 ORTHO05D006048 1.3e-111 406.8 267 72.7
MD06G1194800 Malus domestica HOM05D004915 ORTHO05D006048 2.1e-109 399.4 259 75.3
FAN10G0297 Fragaria x ananassa HOM05D004915 ORTHO05D006048 2.8e-109 399.1 271 72.0
TAR622G0868 Trochodendron aralioides HOM05D004915 ORTHO05D006048 4.8e-109 398.3 253 73.5
FAN04G1144 Fragaria x ananassa HOM05D004915 ORTHO05D006048 3.1e-108 395.6 268 72.4
Eucgr.B00520 Eucalyptus grandis HOM05D004915 ORTHO05D006048 4.0e-108 395.2 261 71.6
FAN03G1016 Fragaria x ananassa HOM05D004915 ORTHO05D006048 5.3e-108 394.8 271 71.6
FvH4_7g07490 Fragaria vesca HOM05D004915 ORTHO05D006048 6.9e-108 394.4 271 71.2
Hma1.2p1_0060F.1_g033670 Hydrangea macrophylla HOM05D004915 ORTHO05D006048 2.6e-107 392.5 258 72.5
Cc04_g16470 Coffea canephora HOM05D004915 ORTHO05D006048 7.6e-107 391.0 264 70.5
Rhsim08G0070400 Rhododendron simsii HOM05D004915 ORTHO05D006048 7.6e-107 391.0 254 72.8
FAN08G1694 Fragaria x ananassa HOM05D004915 ORTHO05D006048 2.2e-106 389.4 268 71.3
FAN13G2234 Fragaria x ananassa HOM05D004915 ORTHO05D006048 2.2e-106 389.4 268 72.0
TWI34G1631 Tripterygium wilfordii HOM05D004915 ORTHO05D006048 2.9e-106 389.0 254 74.4
CANSAT56G1541 Cannabis sativa HOM05D004915 ORTHO05D006048 3.8e-106 388.7 248 72.6
Aqoxy3G03429 Aquilegia oxysepala HOM05D004915 ORTHO05D006048 8.4e-106 387.5 254 69.7
Dinv37673 Davidia involucrata HOM05D004915 ORTHO05D006048 1.1e-105 387.1 254 72.8
ECA246G2050 Erigeron canadensis HOM05D004915 ORTHO05D006048 1.4e-105 386.7 258 71.3
FvH4_5g14790 Fragaria vesca HOM05D004915 ORTHO05D006048 1.9e-105 386.3 268 70.9
FAN18G3490 Fragaria x ananassa HOM05D004915 ORTHO05D006048 2.5e-105 386.0 268 70.9
Oeu058311.1 Olea europaea HOM05D004915 ORTHO05D006048 5.5e-105 384.8 246 73.2
Lj5C110T19 Lonicera japonica HOM05D004915 ORTHO05D006048 7.1e-105 384.4 253 71.9
MD14G1201800 Malus domestica HOM05D004915 ORTHO05D006048 9.3e-105 384.0 259 72.2
CSS0019190 Camellia sinensis var. sinensis HOM05D004915 ORTHO05D006048 1.2e-104 383.6 254 72.0
Atru.chr8.192 Acer truncatum HOM05D004915 ORTHO05D006048 2.1e-104 382.9 259 69.9
PSO478G3309 Papaver somniferum HOM05D004915 ORTHO05D006048 2.1e-104 382.9 259 70.3
MELO3C001989.2 Cucumis melo HOM05D004915 ORTHO05D006048 4.6e-104 381.7 255 71.8
Potri.017G085100 Populus trichocarpa HOM05D004915 ORTHO05D006048 7.9e-104 380.9 264 70.8
Actinidia38781 Actinidia chinensis HOM05D004915 ORTHO05D006048 1.0e-103 380.6 260 69.6
CsaV3_1G005570 Cucumis sativus L. HOM05D004915 ORTHO05D006048 1.3e-103 380.2 255 71.8
ClCG04G012190 Citrullus lanatus HOM05D004915 ORTHO05D006048 2.3e-103 379.4 255 71.4
Oeu037787.1 Olea europaea HOM05D004915 ORTHO05D006048 2.3e-103 379.4 275 68.0
SGA_v2.0_scaffold17G08101 Striga asiatica HOM05D004915 ORTHO05D006048 3.0e-103 379.0 254 70.9
MBI05_g33757_MAGBIO Magnolia biondii HOM05D004915 ORTHO05D006048 5.1e-103 378.3 259 70.7
TAR374G0666 Trochodendron aralioides HOM05D004915 ORTHO05D006048 1.1e-102 377.1 230 75.2
Sabra17G0075000 Salix brachista HOM05D004915 ORTHO05D006048 3.3e-102 375.6 264 70.1
CAN.G199.5 Capsicum annuum HOM05D004915 ORTHO05D006048 5.7e-102 374.8 239 72.8
Migut.L00264 Erythranthe guttata HOM05D004915 ORTHO05D006048 7.4e-102 374.4 258 69.0
Manes.01G092400 Manihot esculenta HOM05D004915 ORTHO05D006048 7.4e-102 374.4 250 68.8
Nitab4.5_0000121g0120 Nicotiana tabacum HOM05D004915 ORTHO05D006048 7.4e-102 374.4 241 72.6
Ciclev10012474m.g Citrus clementina HOM05D004915 ORTHO05D006048 1.6e-101 373.2 259 69.5
Peaxi162Scf00241g00416 Petunia axillaris HOM05D004915 ORTHO05D006048 1.6e-101 373.2 252 70.6
Actinidia38763 Actinidia chinensis HOM05D004915 ORTHO05D006048 3.7e-101 372.1 270 67.0
HanXRQChr09g0247201 Helianthus annuus HOM05D004915 ORTHO05D006048 8.2e-101 370.9 256 68.4
AUR62021031 Chenopodium quinoa HOM05D004915 ORTHO05D006048 1.4e-100 370.2 253 69.2
HanXRQChr08g0236601 Helianthus annuus HOM05D004915 ORTHO05D006048 3.1e-100 369.0 254 68.9
MBI05_g35466_MAGBIO Magnolia biondii HOM05D004915 ORTHO05D006048 4.1e-100 368.6 273 67.0
Cpa.g.sc179.53 Carica papaya HOM05D004915 ORTHO05D006048 5.3e-100 368.2 266 66.5
Lsat_1_v5_gn_9_27040 Lactuca sativa HOM05D004915 ORTHO05D006048 1.2e-99 367.1 258 67.4
Solyc06g065310.3 Solanum lycopersicum HOM05D004915 ORTHO05D006048 1.5e-99 366.7 241 71.0
MSTRG.15680 Avicennia marina HOM05D004915 ORTHO05D006048 3.4e-99 365.5 247 70.0
Sopen06g023800 Solanum pennellii HOM05D004915 ORTHO05D006048 2.2e-98 362.8 241 70.1
Lj4A111T68 Lonicera japonica HOM05D004915 ORTHO05D006048 2.9e-98 362.5 274 65.3
Hund02640 Selenicereus undatus HOM05D004915 ORTHO05D006048 1.1e-97 360.5 259 66.0
AL5G18870 Arabidopsis lyrata HOM05D004915 ORTHO05D006048 5.5e-97 358.2 254 65.4
Lj1g0024391 Lotus japonicus HOM05D004915 ORTHO05D006048 5.5e-97 358.2 255 66.3
Nn4g23203 Nelumbo nucifera HOM05D004915 ORTHO05D006048 5.5e-97 358.2 264 66.7
PGSC0003DMG400026111 Solanum tuberosum HOM05D004915 ORTHO05D006048 1.2e-96 357.1 239 69.0
TPR.G33578 Trifolium pratense HOM05D004915 ORTHO05D006048 6.1e-96 354.8 247 67.6
Peaxi162Scf00106g00016 Petunia axillaris HOM05D004915 ORTHO05D006048 1.4e-95 353.6 281 62.3
AUR62018412 Chenopodium quinoa HOM05D004915 ORTHO05D006048 1.8e-95 353.2 240 68.8
Carub.0005s0760 Capsella rubella HOM05D004915 ORTHO05D006048 2.3e-95 352.8 254 64.2
EL10Ac3g07299 Beta vulgaris HOM05D004915 ORTHO05D006048 3.0e-95 352.4 316 57.9
PGR083G1377 Punica granatum HOM05D004915 ORTHO05D006048 3.0e-95 352.4 226 73.5
arahy.Tifrunner.gnm1.ann1.BYQL86 Arachis hypogaea HOM05D004915 ORTHO05D006048 5.1e-95 351.7 240 67.9
Thhalv10005292m.g Eutrema salsugineum HOM05D004915 ORTHO05D006048 5.1e-95 351.7 254 64.6
Phvul.008G037200 Phaseolus vulgaris HOM05D004915 ORTHO05D006048 6.7e-95 351.3 252 63.1
VMungo1383G0755 Vigna mungo HOM05D004915 ORTHO05D006048 8.8e-95 350.9 248 63.3
BolC7t44312H Brassica oleracea HOM05D004915 ORTHO05D006048 1.1e-94 350.5 252 64.7
Sp2g17640 Schrenkiella parvula HOM05D004915 ORTHO05D006048 1.1e-94 350.5 254 64.2
BraA06t26934Z Brassica rapa HOM05D004915 ORTHO05D006048 1.5e-94 350.1 254 63.4
Medtr1g111380 Medicago truncatula HOM05D004915 ORTHO05D006048 1.9e-94 349.7 245 64.1
Medtr7g011040 Medicago truncatula HOM05D004915 ORTHO05D006048 4.3e-94 348.6 245 64.5
TPR.G39201 Trifolium pratense HOM05D004915 ORTHO05D006048 9.7e-94 347.4 247 66.0
BcaC06g33662 Brassica carinata HOM05D004915 ORTHO05D006048 1.3e-93 347.1 252 64.3
C07p37910 Brassica napus HOM05D004915 ORTHO05D006048 1.3e-93 347.1 252 64.3
Sp7g02320 Schrenkiella parvula HOM05D004915 ORTHO05D006048 1.3e-93 347.1 262 63.4
CSS0012692 Camellia sinensis var. sinensis HOM05D004915 ORTHO05D006048 2.2e-93 346.3 254 67.3
Psat3g200280 Pisum sativum HOM05D004915 ORTHO05D006048 2.2e-93 346.3 245 66.1
Ca_02901_v3 Cicer arietinum L. HOM05D004915 ORTHO05D006048 2.8e-93 345.9 252 64.3
Glyma.09G236600 Glycine max HOM05D004915 ORTHO05D006048 3.7e-93 345.5 245 65.7
A06p40200 Brassica napus HOM05D004915 ORTHO05D006048 8.2e-93 344.4 254 61.8
Thhalv10027886m.g Eutrema salsugineum HOM05D004915 ORTHO05D006048 8.2e-93 344.4 262 64.1
Aa31LG9G16420 Aethionema arabicum HOM05D004915 ORTHO05D006048 1.1e-92 344.0 254 64.2
Lalb_Chr23g0265041 Lupinus albus HOM05D004915 ORTHO05D006048 1.1e-92 344.0 245 65.7
Aa31LG2G4180 Aethionema arabicum HOM05D004915 ORTHO05D006048 2.4e-92 342.8 254 62.6
CARHR152100 Cardamine hirsuta HOM05D004915 ORTHO05D006048 2.4e-92 342.8 254 61.0
HPP92_002574 Vanilla planifolia HOM05D004915 ORTHO05D006048 3.1e-92 342.4 243 65.8
HPP92_002576 Vanilla planifolia HOM05D004915 ORTHO05D006048 3.1e-92 342.4 243 65.8
CARHR262560 Cardamine hirsuta HOM05D004915 ORTHO05D006048 2.0e-91 339.7 252 64.3
DCAR_015957 Daucus carota HOM05D004915 ORTHO05D006048 4.5e-91 338.6 245 67.8
Carub.0007s3626 Capsella rubella HOM05D004915 ORTHO05D006048 6.5e-90 334.7 244 65.2
BolC4t26193H Brassica oleracea HOM05D004915 ORTHO05D006048 1.9e-89 333.2 255 61.6
Os08g0435800 Oryza sativa ssp. japonica HOM05D004915 ORTHO05D006048 2.5e-89 332.8 244 63.5
BraA04t16903Z Brassica rapa HOM05D004915 ORTHO05D006048 1.2e-88 330.5 245 62.4
C04p46080 Brassica napus HOM05D004915 ORTHO05D006048 1.6e-88 330.1 255 60.8
A04p12400 Brassica napus HOM05D004915 ORTHO05D006048 4.7e-88 328.6 245 62.4
Zm00001eb211140 Zea mays HOM05D004915 ORTHO05D006048 6.7e-87 324.7 245 62.9
Gorai.001G074400 Gossypium raimondii HOM05D004915 ORTHO05D006048 1.1e-86 323.9 202 77.2
Gohir.D07G070500 Gossypium hirsutum HOM05D004915 ORTHO05D006048 2.6e-86 322.8 202 76.7
THA.LOC104825807 Tarenaya hassleriana HOM05D004915 ORTHO05D006048 9.7e-86 320.9 291 56.0
PGR031G1409 Punica granatum HOM05D004915 ORTHO05D006048 8.5e-82 307.8 214 68.7
SEGI_18610 Sequoiadendron giganteum HOM05D004915 ORTHO05D006048 9.4e-81 304.3 215 65.1
AT3G29010 Arabidopsis thaliana HOM05D004915 ORTHO05D006048 1.2e-80 303.9 197 71.1
Sc04g0002730 Simmondsia chinensis HOM05D004915 ORTHO05D006048 1.0e-79 300.8 180 77.2
Sed0011950 Sechium edule HOM05D004915 ORTHO05D006048 1.8e-79 300.1 188 74.5
Actinidia26226 Actinidia chinensis HOM05D004915 ORTHO05D006048 2.8e-77 292.7 241 60.6
CSS0012742 Camellia sinensis var. sinensis HOM05D004915 ORTHO05D006048 1.1e-76 290.8 258 59.3
Mapoly0106s0015 Marchantia polymorpha HOM05D004915 ORTHO05D006048 5.9e-75 285.0 245 55.5
BcaB06g27359 Brassica carinata HOM05D004915 ORTHO05D006048 2.1e-72 276.6 260 54.2
Pp3c2_33530 Physcomitrium patens HOM05D004915 ORTHO05D006048 4.7e-72 275.4 243 55.6
AagrBONN_evm.TU.Sc2ySwM_344.3958 Anthoceros agrestis HOM05D004915 ORTHO05D006048 1.1e-68 264.2 224 54.5
SMO119G0486 Selaginella moellendorffii HOM05D004915 ORTHO05D006048 3.1e-68 262.7 222 52.7
ATR0626G227 Amborella trichopoda HOM05D004915 ORTHO05D006048 1.1e-65 254.2 194 61.3
QL06p014871 Quercus lobata HOM05D004915 ORTHO05D006048 3.6e-64 249.2 129 86.8
AagrBONN_evm.TU.Sc2ySwM_362.689 Anthoceros agrestis HOM05D004915 ORTHO05D006048 4.7e-64 248.8 181 60.2
HPP92_002578 Vanilla planifolia HOM05D006076 ORTHO05D007871 2.4e-60 236.5 243 51.0
AagrBONN_evm.TU.Sc2ySwM_362.690 Anthoceros agrestis HOM05D004915 ORTHO05D006048 1.2e-59 234.2 170 60.0
MCO14G534 Micromonas commoda HOM05D004915 ORTHO05D006048 4.7e-56 222.2 212 50.5
Cre01.g053750 Chlamydomonas reinhardtii HOM05D004915 ORTHO05D006048 8.9e-55 218.0 250 46.0
HanXRQChr14g0437411 Helianthus annuus HOM05D004915 ORTHO05D006048 7.5e-54 214.9 139 71.9
Gohir.A07G066000 Gossypium hirsutum HOM05D004915 ORTHO05D006048 3.7e-53 212.6 144 72.2
unitig_60.g25520 Utricularia gibba HOM05D004915 ORTHO05D006048 2.3e-50 203.4 254 45.3
HanXRQChr13g0408591 Helianthus annuus HOM05D004915 ORTHO05D006048 1.1e-49 201.1 126 73.8
vmacro05688 Vaccinium macrocarpon HOM05D004915 ORTHO05D006048 3.7e-45 186.0 138 65.2
Nitab4.5_0005170g0010 Nicotiana tabacum HOM05D004915 ORTHO05D006048 2.4e-44 183.3 114 74.6
Nitab4.5_0004528g0010 Nicotiana tabacum HOM05D004915 ORTHO05D006048 1.6e-43 180.6 276 39.9
CBR_g58409 Chara braunii HOM05D004915 ORTHO05D006048 1.0e-42 177.9 128 60.9
SMO164G0178 Selaginella moellendorffii HOM05D004915 ORTHO05D006048 1.7e-42 177.2 224 39.7
PRCOL_00000090 Prasinoderma coloniale HOM05D004915 ORTHO05D006048 3.3e-41 172.9 271 35.8
vmacro18186 Vaccinium macrocarpon HOM05D004915 ORTHO05D006048 9.5e-41 171.4 194 50.5
DCAR_026059 Daucus carota HOM05D004915 ORTHO05D006048 8.9e-39 164.9 116 66.4
FAN06G0706 Fragaria x ananassa HOM05D004915 ORTHO05D006048 1.4e-31 141.0 117 64.1
Ah.04g150570 Amaranthus hybridus HOM05D004915 ORTHO05D006048 5.4e-28 129.0 79 73.4
QL06p014899 Quercus lobata HOM05D004915 ORTHO05D006048 2.3e-26 123.6 65 81.5
Nitab4.5_0005170g0060 Nicotiana tabacum HOM05D004915 ORTHO05D006048 7.6e-22 108.6 99 50.5
ATR0642G001 Amborella trichopoda HOM05D004915 ORTHO05D006048 1.5e-17 94.4 60 73.3
Pp3s30_306 Physcomitrium patens HOM05D004915 ORTHO05D043763 1.1e-09 68.2 195 27.2
DCAR_015961 Daucus carota HOM05D004915 ORTHO05D006048 1.5e-09 67.8 70 48.6


User provided reference genes

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