Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G029900 Carya illinoinensis HOM05D006711 ORTHO05D008104 1.8e-31 138.7 71 100.0
Manes.14G068400 Manihot esculenta HOM05D006711 ORTHO05D008104 1.3e-26 122.5 67 89.6
Sc04g0001970 Simmondsia chinensis HOM05D006711 ORTHO05D008104 9.5e-25 116.3 67 85.1
Hund09419 Selenicereus undatus HOM05D006711 ORTHO05D008104 1.6e-24 115.5 67 86.6
Ah.10g035450 Amaranthus hybridus HOM05D006711 ORTHO05D008104 2.8e-24 114.8 67 85.1
Potri.012G078000 Populus trichocarpa HOM05D006711 ORTHO05D008104 2.8e-24 114.8 67 83.6
Potri.015G073300 Populus trichocarpa HOM05D006711 ORTHO05D008104 2.8e-24 114.8 67 83.6
Duzib084G0075 Durio zibethinus HOM05D006711 ORTHO05D008104 4.7e-24 114.0 67 83.6
Thecc.03G007500 Theobroma cacao HOM05D006711 ORTHO05D008104 4.7e-24 114.0 67 83.6
Ciclev10023110m.g Citrus clementina HOM05D006711 ORTHO05D008104 8.0e-24 113.2 67 83.6
Sabra15G0097500 Salix brachista HOM05D006711 ORTHO05D008104 8.0e-24 113.2 67 83.6
AUR62031000 Chenopodium quinoa HOM05D006711 ORTHO05D008104 1.1e-23 112.8 67 83.6
AUR62008246 Chenopodium quinoa HOM05D001451 ORTHO05D008104 1.8e-23 112.1 69 79.7
ClCG01G014050 Citrullus lanatus HOM05D006711 ORTHO05D008104 2.3e-23 111.7 67 82.1
Cfa019085 Carpinus fangiana HOM05D006711 ORTHO05D008104 3.1e-23 111.3 67 82.1
THA.LOC104798980 Tarenaya hassleriana HOM05D000086 ORTHO05D008104 3.1e-23 111.3 67 82.1
Duzib068G0631 Durio zibethinus HOM05D006711 ORTHO05D008104 4.0e-23 110.9 67 82.1
GSVIVG01032507001 Vitis vinifera HOM05D006711 ORTHO05D008104 6.8e-23 110.2 67 80.6
Ca_21901_v3 Cicer arietinum L. HOM05D006711 ORTHO05D008104 8.9e-23 109.8 67 80.6
CsaV3_1G008300 Cucumis sativus L. HOM05D006711 ORTHO05D008104 8.9e-23 109.8 67 82.1
FvH4_5g05020 Fragaria vesca HOM05D006711 ORTHO05D008104 8.9e-23 109.8 67 82.1
FAN04G0211 Fragaria x ananassa HOM05D006711 ORTHO05D008104 8.9e-23 109.8 67 82.1
FAN08G2471 Fragaria x ananassa HOM05D006711 ORTHO05D008104 8.9e-23 109.8 67 82.1
FAN13G1278 Fragaria x ananassa HOM05D006711 ORTHO05D008104 8.9e-23 109.8 67 82.1
FAN18G1479 Fragaria x ananassa HOM05D006711 ORTHO05D008104 8.9e-23 109.8 67 82.1
FAN18G2156 Fragaria x ananassa HOM05D006711 ORTHO05D008104 8.9e-23 109.8 67 82.1
Gohir.D12G276600 Gossypium hirsutum HOM05D006711 ORTHO05D008104 1.2e-22 109.4 67 80.6
Medtr4g106700 Medicago truncatula HOM05D006711 ORTHO05D008104 1.2e-22 109.4 67 82.1
PGR044G2080 Punica granatum HOM05D006711 ORTHO05D008104 1.2e-22 109.4 67 80.6
Gohir.A12G275900 Gossypium hirsutum HOM05D006711 ORTHO05D008104 1.5e-22 109.0 67 80.6
Gorai.008G297100 Gossypium raimondii HOM05D006711 ORTHO05D008104 1.5e-22 109.0 67 80.6
Sabra12G0055800 Salix brachista HOM05D006711 ORTHO05D008104 1.5e-22 109.0 67 79.1
COL.COLO4_24770 Corchorus olitorius HOM05D006711 ORTHO05D008104 2.0e-22 108.6 67 80.6
MELO3C002246.2 Cucumis melo HOM05D006711 ORTHO05D008104 2.6e-22 108.2 67 80.6
PSO063G1690 Papaver somniferum HOM05D006711 ORTHO05D008104 3.4e-22 107.8 67 77.6
PSO832G1815 Papaver somniferum HOM05D006711 ORTHO05D008104 3.4e-22 107.8 67 77.6
THA.LOC104821460 Tarenaya hassleriana HOM05D006711 ORTHO05D008104 3.4e-22 107.8 67 80.6
Sed0004980 Sechium edule HOM05D006711 ORTHO05D008104 4.4e-22 107.5 67 79.1
vmacro05808 Vaccinium macrocarpon HOM05D006711 ORTHO05D008104 4.4e-22 107.5 67 82.1
Aa31LG11G810 Aethionema arabicum HOM05D006711 ORTHO05D008104 5.8e-22 107.1 67 80.6
Aa31LG4G16690 Aethionema arabicum HOM05D006711 ORTHO05D008104 5.8e-22 107.1 67 77.6
AL5G27360 Arabidopsis lyrata HOM05D006711 ORTHO05D008104 5.8e-22 107.1 67 77.6
CARHR156770 Cardamine hirsuta HOM05D006711 ORTHO05D008104 5.8e-22 107.1 67 77.6
CiPaw.12G024900 Carya illinoinensis HOM05D006711 ORTHO05D008104 5.8e-22 107.1 79 73.4
Lj4g0001750 Lotus japonicus HOM05D006711 ORTHO05D008104 5.8e-22 107.1 67 77.6
Oeu059193.1 Olea europaea HOM05D006711 ORTHO05D008104 5.8e-22 107.1 67 80.6
Thhalv10010870m.g Eutrema salsugineum HOM05D006711 ORTHO05D008104 7.5e-22 106.7 67 76.1
MD06G1177900 Malus domestica HOM05D006711 ORTHO05D008104 7.5e-22 106.7 67 79.1
MD14G1184500 Malus domestica HOM05D006711 ORTHO05D008104 7.5e-22 106.7 67 79.1
Prupe.5G177100 Prunus persica HOM05D006711 ORTHO05D008104 7.5e-22 106.7 67 80.6
Cc07_g02450 Coffea canephora HOM05D006711 ORTHO05D008104 9.8e-22 106.3 67 80.6
Lalb_Chr12g0201501 Lupinus albus HOM05D006711 ORTHO05D008104 9.8e-22 106.3 67 76.1
PSO478G1559 Papaver somniferum HOM05D006711 ORTHO05D008104 9.8e-22 106.3 67 77.6
Sp5g13950 Schrenkiella parvula HOM05D006711 ORTHO05D008104 1.3e-21 105.9 67 76.1
EL10Ac5g10797 Beta vulgaris HOM05D006711 ORTHO05D008104 1.7e-21 105.5 67 79.1
Oeu047317.1 Olea europaea HOM05D006711 ORTHO05D008104 2.2e-21 105.1 67 77.6
BcaC07g39289 Brassica carinata HOM05D006711 ORTHO05D008104 2.9e-21 104.8 67 77.6
A06p19610 Brassica napus HOM05D006711 ORTHO05D008104 2.9e-21 104.8 67 77.6
C08p22960 Brassica napus HOM05D006711 ORTHO05D008104 2.9e-21 104.8 67 77.6
BolC8t49933H Brassica oleracea HOM05D006711 ORTHO05D008104 2.9e-21 104.8 67 77.6
BraA06t25041Z Brassica rapa HOM05D006711 ORTHO05D008104 2.9e-21 104.8 67 77.6
Atru.chr9.2428 Acer truncatum HOM05D006711 ORTHO05D008104 3.7e-21 104.4 67 77.6
arahy.Tifrunner.gnm1.ann1.5NY27E Arachis hypogaea HOM05D006711 ORTHO05D008104 3.7e-21 104.4 67 76.1
Eucgr.K02867 Eucalyptus grandis HOM05D006711 ORTHO05D008104 3.7e-21 104.4 67 76.1
Hma1.2p1_0697F.1_g204840 Hydrangea macrophylla HOM05D006711 ORTHO05D008104 4.9e-21 104.0 67 77.6
PSO017G6527 Papaver somniferum HOM05D006711 ORTHO05D008104 4.9e-21 104.0 67 77.6
BcaB01g00848 Brassica carinata HOM05D006711 ORTHO05D008104 8.3e-21 103.2 67 76.1
Carub.0005s1414 Capsella rubella HOM05D000086 ORTHO05D008104 8.3e-21 103.2 67 73.1
Aqoxy3G00948 Aquilegia oxysepala HOM05D006711 ORTHO05D008104 1.1e-20 102.8 68 77.9
Cpa.g.sc134.10 Carica papaya HOM05D006711 ORTHO05D008104 1.1e-20 102.8 67 76.1
Psat4g057240 Pisum sativum HOM05D006711 ORTHO05D008104 1.1e-20 102.8 67 73.1
SalBow6G5258 Salvia bowleyana HOM05D006711 ORTHO05D008104 1.9e-20 102.1 67 77.6
TWI15G0492 Tripterygium wilfordii HOM05D006711 ORTHO05D008104 1.9e-20 102.1 63 79.4
HanXRQChr09g0265981 Helianthus annuus HOM05D006711 ORTHO05D008104 3.2e-20 101.3 62 83.9
CDE10G0118 Ceratophyllum demersum HOM05D001322 ORTHO05D001301 4.1e-20 100.9 66 80.3
DCAR_011220 Daucus carota HOM05D006711 ORTHO05D008104 4.1e-20 100.9 67 76.1
TPR.G37552 Trifolium pratense HOM05D006711 ORTHO05D008104 4.1e-20 100.9 64 78.1
Actinidia33966 Actinidia chinensis HOM05D006711 ORTHO05D008104 5.4e-20 100.5 67 74.6
MBI15_g24174_MAGBIO Magnolia biondii HOM05D006711 ORTHO05D008104 7.0e-20 100.1 60 83.3
CANSAT11G1423 Cannabis sativa HOM05D006711 ORTHO05D008104 9.2e-20 99.8 67 74.6
Peaxi162Scf00429g00118 Petunia axillaris HOM05D006711 ORTHO05D008104 9.2e-20 99.8 67 73.1
CDE10G0426 Ceratophyllum demersum HOM05D006711 ORTHO05D008104 1.2e-19 99.4 59 83.1
Migut.N03365 Erythranthe guttata HOM05D006711 ORTHO05D008104 1.2e-19 99.4 67 73.1
TAR622G0690 Trochodendron aralioides HOM05D001464 ORTHO05D002836 1.6e-19 99.0 61 77.0
HPP92_010905 Vanilla planifolia HOM05D006711 ORTHO05D008104 1.6e-19 99.0 67 74.6
HPP92_010907 Vanilla planifolia HOM05D006711 ORTHO05D008104 1.6e-19 99.0 67 74.6
Lsat_1_v5_gn_4_181601 Lactuca sativa HOM05D006711 ORTHO05D008104 2.1e-19 98.6 62 82.3
ATR1149G012 Amborella trichopoda HOM05D006711 ORTHO05D008104 3.5e-19 97.8 65 80.0
HanXRQChr12g0385511 Helianthus annuus HOM05D006711 ORTHO05D008104 1.0e-18 96.3 67 73.1
GSVIVG01007800001 Vitis vinifera HOM05D006711 ORTHO05D008104 1.0e-18 96.3 60 75.0
Glyma.05G035600 Glycine max HOM05D006711 ORTHO05D008104 1.3e-18 95.9 55 89.1
Sopen11g029530 Solanum pennellii HOM05D006711 ORTHO05D008104 1.3e-18 95.9 67 71.6
Nitab4.5_0002792g0010 Nicotiana tabacum HOM05D006711 ORTHO05D008104 1.7e-18 95.5 67 71.6
Rhsim08G0056600 Rhododendron simsii HOM05D000086 ORTHO05D000983 1.7e-18 95.5 60 78.3
Phvul.003G198200 Phaseolus vulgaris HOM05D006711 ORTHO05D008104 3.0e-18 94.7 55 87.3
Nitab4.5_0004762g0010 Nicotiana tabacum HOM05D006711 ORTHO05D008104 5.1e-18 94.0 67 70.1
Nn4g22854 Nelumbo nucifera HOM05D006711 ORTHO05D008104 8.6e-18 93.2 60 76.7
Oeu006591.3 Olea europaea HOM05D006711 ORTHO05D008104 8.6e-18 93.2 90 58.9
Eucgr.J02179 Eucalyptus grandis HOM05D006711 ORTHO05D008104 4.3e-17 90.9 67 65.7
unitig_46.g17997 Utricularia gibba HOM05D006711 ORTHO05D008104 5.6e-17 90.5 86 61.6
CAN.G742.33 Capsicum annuum HOM05D006711 ORTHO05D008104 1.2e-16 89.4 67 65.7
Zm00001eb311470 Zea mays HOM05D006711 ORTHO05D008104 1.2e-16 89.4 62 77.4
Sed0016611 Sechium edule HOM05D006711 ORTHO05D008104 2.1e-16 88.6 67 70.1
Os09g0375900 Oryza sativa ssp. japonica HOM05D006711 ORTHO05D008104 2.8e-16 88.2 55 83.6
QL10p013547 Quercus lobata HOM05D006711 ORTHO05D008104 3.1e-15 84.7 137 40.1
ATR0820G148 Amborella trichopoda HOM05D006711 ORTHO05D008104 5.8e-14 80.5 68 64.7
ATR0661G003 Amborella trichopoda HOM05D006711 ORTHO05D008104 9.9e-14 79.7 71 62.0
Mapoly0124s0028 Marchantia polymorpha HOM05D006711 ORTHO05D008104 2.2e-13 78.6 64 65.6
CBR_g49624 Chara braunii HOM05D006711 ORTHO05D008104 2.9e-13 78.2 59 69.5
PGSC0003DMG400003004 Solanum tuberosum HOM05D006711 ORTHO05D008104 1.1e-12 76.3 112 43.8
AagrBONN_evm.TU.Sc2ySwM_368.1224 Anthoceros agrestis HOM05D006711 ORTHO05D008104 5.4e-12 73.9 59 69.5
Rhsim10G0024900 Rhododendron simsii HOM05D006711 ORTHO05D008104 9.2e-12 73.2 142 37.3
SEGI_30617 Sequoiadendron giganteum HOM05D006711 ORTHO05D008104 2.1e-11 72.0 60 56.7
Haze_07479 Corylus avellana HOM05D006711 ORTHO05D008104 2.7e-11 71.6 42 85.7
CSS0024346 Camellia sinensis var. sinensis HOM05D006711 ORTHO05D008104 3.5e-11 71.2 43 83.7
Pp3c14_16830 Physcomitrium patens HOM05D006711 ORTHO05D008104 3.5e-11 71.2 61 59.0
Pp3c3_16770 Physcomitrium patens HOM05D006711 ORTHO05D008104 4.6e-11 70.9 59 66.1
Rhsim10G0024700 Rhododendron simsii HOM05D006711 ORTHO05D008104 6.0e-11 70.5 43 83.7
RcHm_v2.0_Chr7g0194021 Rosa chinensis HOM05D006711 ORTHO05D008104 1.7e-10 68.9 42 85.7
Dinv35040 Davidia involucrata HOM05D006711 ORTHO05D008104 3.3e-09 64.7 39 82.1
PRCOL_00004863 Prasinoderma coloniale HOM05D006711 ORTHO05D008104 5.6e-09 63.9 59 57.6
Nn3g16941 Nelumbo nucifera HOM05D006711 ORTHO05D008104 8.9e-07 56.6 51 56.9


User provided reference genes

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