Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G029400 Carya illinoinensis HOM05D007441 ORTHO05D009501 2.6e-98 362.1 189 100.0
QL10p013655 Quercus lobata HOM05D007441 ORTHO05D009501 1.2e-63 246.9 184 71.2
GSVIVG01007790001 Vitis vinifera HOM05D007441 ORTHO05D009501 7.5e-61 237.7 182 68.1
Hma1.2p1_0176F.1_g077710 Hydrangea macrophylla HOM05D007441 ORTHO05D009501 3.2e-59 232.3 192 65.6
Prupe.5G176500 Prunus persica HOM05D007441 ORTHO05D009501 1.3e-57 226.9 185 65.9
Dinv20676 Davidia involucrata HOM05D007441 ORTHO05D009501 1.7e-57 226.5 179 68.2
RcHm_v2.0_Chr7g0193911 Rosa chinensis HOM05D007441 ORTHO05D009501 6.6e-57 224.6 182 64.8
FAN18G4363 Fragaria x ananassa HOM05D007441 ORTHO05D009501 1.1e-56 223.8 176 67.0
Haze_07488 Corylus avellana HOM05D007441 ORTHO05D009501 1.5e-56 223.4 184 67.9
FvH4_5g05090 Fragaria vesca HOM05D007441 ORTHO05D009501 3.3e-56 222.2 176 66.5
FAN04G2715 Fragaria x ananassa HOM05D007441 ORTHO05D009501 6.2e-55 218.0 176 64.8
Ciclev10022460m.g Citrus clementina HOM05D007441 ORTHO05D009501 1.4e-54 216.9 181 64.6
FAN13G3077 Fragaria x ananassa HOM05D007441 ORTHO05D009501 1.4e-54 216.9 176 64.8
Actinidia19093 Actinidia chinensis HOM05D007441 ORTHO05D009501 4.0e-54 215.3 181 64.6
Glyma.17G091300 Glycine max HOM05D007441 ORTHO05D009501 1.5e-53 213.4 181 61.3
Duzib084G0400 Durio zibethinus HOM05D007441 ORTHO05D009501 7.5e-53 211.1 175 64.6
CSS0037538 Camellia sinensis var. sinensis HOM05D007441 ORTHO05D009501 1.3e-52 210.3 190 61.6
VMungo1215G1307 Vigna mungo HOM05D007441 ORTHO05D009501 1.7e-52 209.9 151 68.2
Lj4g0018861 Lotus japonicus HOM05D007441 ORTHO05D009501 3.7e-52 208.8 146 70.5
MD14G1183800 Malus domestica HOM05D007441 ORTHO05D009501 8.3e-52 207.6 186 59.1
Sc04g0001930 Simmondsia chinensis HOM05D007441 ORTHO05D009501 8.3e-52 207.6 147 68.0
TWI15G0162 Tripterygium wilfordii HOM05D007441 ORTHO05D009501 1.4e-51 206.8 182 63.7
Lsat_1_v5_gn_1_26521 Lactuca sativa HOM05D007441 ORTHO05D009501 3.2e-51 205.7 148 68.9
Lj9A451T94 Lonicera japonica HOM05D007441 ORTHO05D009501 4.1e-51 205.3 172 61.6
ECA247G2439 Erigeron canadensis HOM05D007441 ORTHO05D009501 7.1e-51 204.5 146 69.9
Thecc.03G008500 Theobroma cacao HOM05D007441 ORTHO05D009501 1.6e-50 203.4 173 62.4
Phvul.003G198700 Phaseolus vulgaris HOM05D007441 ORTHO05D009501 3.5e-50 202.2 151 64.9
TAR622G1175 Trochodendron aralioides HOM05D007441 ORTHO05D009501 3.5e-50 202.2 179 62.0
arahy.Tifrunner.gnm1.ann1.01HJP6 Arachis hypogaea HOM05D007441 ORTHO05D009501 1.0e-49 200.7 182 57.7
arahy.Tifrunner.gnm1.ann1.DR4P4T Arachis hypogaea HOM05D007441 ORTHO05D009501 1.3e-49 200.3 182 57.7
Duzib205G0170 Durio zibethinus HOM05D007441 ORTHO05D009501 1.7e-49 199.9 177 59.3
Potri.012G078400 Populus trichocarpa HOM05D007441 ORTHO05D009501 4.3e-48 195.3 148 64.9
Cpa.g.sc124.33 Carica papaya HOM05D007441 ORTHO05D009501 5.6e-48 194.9 141 68.8
Manes.06G102900 Manihot esculenta HOM05D007441 ORTHO05D009501 5.6e-48 194.9 195 57.4
Ca_21923_v3 Cicer arietinum L. HOM05D007441 ORTHO05D009501 2.1e-47 193.0 144 66.7
AUR62008240 Chenopodium quinoa HOM05D007441 ORTHO05D009501 3.6e-47 192.2 180 57.8
Lalb_Chr07g0182651 Lupinus albus HOM05D007441 ORTHO05D009501 4.7e-47 191.8 179 59.8
Atru.chr9.2436 Acer truncatum HOM05D007441 ORTHO05D009501 6.2e-47 191.4 191 59.2
CANSAT80G2614 Cannabis sativa HOM05D007441 ORTHO05D009501 8.1e-47 191.0 180 60.0
Ca_21905_v3 Cicer arietinum L. HOM05D007441 ORTHO05D009501 8.1e-47 191.0 177 58.8
Medtr4g106640 Medicago truncatula HOM05D007441 ORTHO05D009501 8.1e-47 191.0 176 59.7
PGR044G0794 Punica granatum HOM05D007441 ORTHO05D009501 2.4e-46 189.5 165 60.0
AUR62030992 Chenopodium quinoa HOM05D007441 ORTHO05D009501 3.1e-46 189.1 180 56.7
Sabra12G0056200 Salix brachista HOM05D007441 ORTHO05D009501 5.2e-46 188.3 189 55.6
Psat4g057000 Pisum sativum HOM05D007441 ORTHO05D009501 8.9e-46 187.6 176 57.4
SGA_v2.0_scaffold90G27976 Striga asiatica HOM05D007441 ORTHO05D009501 5.8e-45 184.9 172 58.7
HanXRQChr02g0037211 Helianthus annuus HOM05D007441 ORTHO05D009501 1.3e-44 183.7 183 51.9
THA.LOC104809273 Tarenaya hassleriana HOM05D007441 ORTHO05D009501 1.3e-44 183.7 182 54.4
SalBow5G3166 Salvia bowleyana HOM05D007441 ORTHO05D009501 1.7e-44 183.3 176 58.0
Hund02733 Selenicereus undatus HOM05D007441 ORTHO05D009501 1.7e-44 183.3 164 59.8
Oeu016356.1 Olea europaea HOM05D007441 ORTHO05D009501 3.8e-44 182.2 189 50.3
Potri.015G073900 Populus trichocarpa HOM05D007441 ORTHO05D009501 6.4e-44 181.4 189 53.4
Aqoxy3G03040 Aquilegia oxysepala HOM05D007441 ORTHO05D009501 1.9e-43 179.9 149 62.4
CARHR026680 Cardamine hirsuta HOM05D007441 ORTHO05D009501 9.2e-43 177.6 192 50.5
Nn4g22840 Nelumbo nucifera HOM05D007441 ORTHO05D009501 1.2e-42 177.2 178 55.1
Solyc03g114120.3 Solanum lycopersicum HOM05D007441 ORTHO05D009501 1.2e-42 177.2 175 56.6
Sopen03g033180 Solanum pennellii HOM05D007441 ORTHO05D009501 1.2e-42 177.2 175 56.6
Rhsim12G0163200 Rhododendron simsii HOM05D007441 ORTHO05D009501 3.5e-42 175.6 136 64.7
MSTRG.23109 Avicennia marina HOM05D007441 ORTHO05D009501 1.0e-41 174.1 182 54.4
BcaC05g26717 Brassica carinata HOM05D007441 ORTHO05D009501 1.3e-41 173.7 179 52.0
EL10Ac5g10787 Beta vulgaris HOM05D007441 ORTHO05D009501 1.7e-41 173.3 147 59.2
Thhalv10008862m.g Eutrema salsugineum HOM05D007441 ORTHO05D009501 1.7e-41 173.3 183 49.7
Sp1g23350 Schrenkiella parvula HOM05D007441 ORTHO05D009501 1.7e-41 173.3 184 52.7
AT1G24450 Arabidopsis thaliana HOM05D007441 ORTHO05D009501 3.0e-41 172.6 178 54.5
Nitab4.5_0006831g0010 Nicotiana tabacum HOM05D007441 ORTHO05D009501 3.0e-41 172.6 173 57.8
PGSC0003DMG400024487 Solanum tuberosum HOM05D007441 ORTHO05D009501 3.9e-41 172.2 175 54.9
C05p25830 Brassica napus HOM05D007441 ORTHO05D009501 5.1e-41 171.8 183 52.5
BolC5t31303H Brassica oleracea HOM05D007441 ORTHO05D009501 6.6e-41 171.4 183 52.5
Carub.0001s2566 Capsella rubella HOM05D007441 ORTHO05D009501 6.6e-41 171.4 143 60.8
TPR.G37479 Trifolium pratense HOM05D007441 ORTHO05D009501 8.7e-41 171.0 171 54.4
Nitab4.5_0010542g0040 Nicotiana tabacum HOM05D007441 ORTHO05D001268 4.3e-40 168.7 139 65.5
A09p38770 Brassica napus HOM05D007441 ORTHO05D009501 5.6e-40 168.3 157 54.1
BraA09t39385Z Brassica rapa HOM05D007441 ORTHO05D009501 5.6e-40 168.3 157 54.1
AL1G40490 Arabidopsis lyrata HOM05D007441 ORTHO05D009501 7.3e-40 167.9 189 50.3
PSO832G4588 Papaver somniferum HOM05D007441 ORTHO05D009501 1.6e-39 166.8 175 50.3
Aa31LG7G9580 Aethionema arabicum HOM05D007441 ORTHO05D009501 4.7e-39 165.2 189 50.8
DCAR_031307 Daucus carota HOM05D007441 ORTHO05D009501 2.4e-38 162.9 123 64.2
CAN.G4872.1 Capsicum annuum HOM05D007441 ORTHO05D009501 4.0e-38 162.2 131 67.2
AUR62029952 Chenopodium quinoa HOM05D007441 ORTHO05D009501 2.6e-37 159.5 125 61.6
BcaC05g26720 Brassica carinata HOM05D007441 ORTHO05D009501 8.4e-36 154.5 183 49.7
CAN.G781.35 Capsicum annuum HOM05D007441 ORTHO05D009501 1.0e-33 147.5 125 61.6
BcaC05g26525 Brassica carinata HOM05D007441 ORTHO05D009501 5.1e-33 145.2 121 57.9
Dinv09163 Davidia involucrata HOM05D007441 ORTHO05D009501 1.8e-30 136.7 123 62.6
MBI15_g31106_MAGBIO Magnolia biondii HOM05D007441 ORTHO05D009501 1.8e-30 136.7 121 56.2
ATR1149G031 Amborella trichopoda HOM05D007441 ORTHO05D009501 4.5e-29 132.1 135 52.6
Peaxi162Scf00017g00269 Petunia axillaris HOM05D007441 ORTHO05D009501 5.8e-29 131.7 113 60.2
BcaC06g35265 Brassica carinata HOM05D007441 ORTHO05D009501 2.9e-28 129.4 108 58.3
C07p18070 Brassica napus HOM05D007441 ORTHO05D009501 1.4e-27 127.1 108 57.4
Zm00001eb210540 Zea mays HOM05D007441 ORTHO05D009501 3.2e-27 125.9 148 43.2
Actinidia34944 Actinidia chinensis HOM05D007441 ORTHO05D009501 9.3e-27 124.4 84 71.4
AUR62039786 Chenopodium quinoa HOM05D007441 ORTHO05D009501 2.1e-26 123.2 119 55.5
BolC7t42316H Brassica oleracea HOM05D007441 ORTHO05D009501 1.5e-21 107.1 105 49.5
AUR62040474 Chenopodium quinoa HOM05D007441 ORTHO05D009501 1.1e-19 100.9 125 44.8
COL.COLO4_16923 Corchorus olitorius HOM05D007441 ORTHO05D009501 1.4e-19 100.5 90 56.7
CAN.G781.34 Capsicum annuum HOM05D007441 ORTHO05D009501 1.0e-17 94.4 77 62.3
Medtr4g079220 Medicago truncatula HOM05D007441 ORTHO05D009501 1.3e-17 94.0 101 53.5
Os03g0854400 Oryza sativa ssp. japonica HOM05D007441 ORTHO05D009501 3.3e-16 89.4 144 38.2
Migut.I00040 Erythranthe guttata HOM05D007441 ORTHO05D009501 5.3e-14 82.0 59 64.4
SMO118G0028 Selaginella moellendorffii HOM05D007441 ORTHO05D009501 7.6e-13 78.2 125 34.4
SEGI_24388 Sequoiadendron giganteum HOM05D007441 ORTHO05D009501 7.1e-11 71.6 109 36.7
HPP92_004711 Vanilla planifolia HOM05D007441 ORTHO05D009501 7.1e-11 71.6 92 45.7


User provided reference genes

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