Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G024500 Carya illinoinensis HOM05D000922 ORTHO05D008200 3.4e-107 391.7 205 100.0
Gohir.D09G167000 Gossypium hirsutum HOM05D000922 ORTHO05D008200 3.2e-89 332.0 205 85.4
Gorai.006G188800 Gossypium raimondii HOM05D000922 ORTHO05D008200 3.2e-89 332.0 205 85.4
Gohir.A09G171300 Gossypium hirsutum HOM05D000922 ORTHO05D008200 4.2e-89 331.6 205 84.9
Thecc.03G014600 Theobroma cacao HOM05D000922 ORTHO05D008200 3.5e-88 328.6 202 86.1
COL.COLO4_30070 Corchorus olitorius HOM05D000922 ORTHO05D008200 6.0e-88 327.8 205 84.4
Prupe.5G171600 Prunus persica HOM05D000922 ORTHO05D008200 1.1e-86 323.6 205 82.4
Atru.chr9.2496 Acer truncatum HOM05D000922 ORTHO05D008200 1.5e-86 323.2 206 82.5
Nn3g16820 Nelumbo nucifera HOM05D000922 ORTHO05D008200 1.5e-86 323.2 205 82.0
ClCG01G013230 Citrullus lanatus HOM05D000922 ORTHO05D008200 5.6e-86 321.2 206 81.6
CsaV3_1G008590 Cucumis sativus L. HOM05D000922 ORTHO05D008200 5.6e-86 321.2 206 81.1
MELO3C002273.2 Cucumis melo HOM05D000922 ORTHO05D008200 9.6e-86 320.5 206 80.6
QL10p010977 Quercus lobata HOM05D000922 ORTHO05D008200 1.3e-85 320.1 204 83.3
Haze_07527 Corylus avellana HOM05D000922 ORTHO05D008200 3.6e-85 318.5 222 80.2
Glyma.17G088100 Glycine max HOM05D000922 ORTHO05D008200 3.6e-85 318.5 205 82.4
Rhsim08G0173800 Rhododendron simsii HOM05D000922 ORTHO05D007418 3.6e-85 318.5 204 82.8
PGSC0003DMG400018154 Solanum tuberosum HOM05D000922 ORTHO05D008200 8.1e-85 317.4 205 82.0
Eucgr.G00068 Eucalyptus grandis HOM05D000922 ORTHO05D008200 1.1e-84 317.0 205 79.0
TWI39G0231 Tripterygium wilfordii HOM05D000922 ORTHO05D008200 1.1e-84 317.0 205 81.0
RcHm_v2.0_Chr7g0193351 Rosa chinensis HOM05D000922 ORTHO05D008200 1.4e-84 316.6 205 81.5
CAN.G1166.6 Capsicum annuum HOM05D000922 ORTHO05D008200 4.0e-84 315.1 205 81.0
vmacro19401 Vaccinium macrocarpon HOM05D000922 ORTHO05D008200 4.0e-84 315.1 205 81.0
Dinv20636 Davidia involucrata HOM05D000922 ORTHO05D008200 6.9e-84 314.3 205 82.0
Sed0005243 Sechium edule HOM05D000922 ORTHO05D008200 9.0e-84 313.9 205 80.5
Nitab4.5_0000514g0030 Nicotiana tabacum HOM05D000922 ORTHO05D008200 1.2e-83 313.5 206 81.1
PGR044G1577 Punica granatum HOM05D000922 ORTHO05D008200 2.0e-83 312.8 205 78.5
MD14G1178100 Malus domestica HOM05D000922 ORTHO05D008200 2.6e-83 312.4 202 81.7
Manes.14G064200 Manihot esculenta HOM05D000922 ORTHO05D008200 2.6e-83 312.4 203 82.3
MSTRG.11466 Avicennia marina HOM05D000922 ORTHO05D008200 3.4e-83 312.0 205 78.5
Ciclev10022297m.g Citrus clementina HOM05D000922 ORTHO05D008200 3.4e-83 312.0 205 82.0
MD06G1172200 Malus domestica HOM05D000922 ORTHO05D008200 3.4e-83 312.0 201 82.1
Nitab4.5_0008678g0030 Nicotiana tabacum HOM05D000922 ORTHO05D008200 4.5e-83 311.6 190 85.3
CSS0000249 Camellia sinensis var. sinensis HOM05D000922 ORTHO05D008200 5.8e-83 311.2 205 81.0
Duzib205G0455 Durio zibethinus HOM05D000922 ORTHO05D008200 2.2e-82 309.3 191 85.9
DCAR_026150 Daucus carota HOM05D000922 ORTHO05D008200 2.9e-82 308.9 204 79.9
GSVIVG01007722001 Vitis vinifera HOM05D000922 ORTHO05D008200 3.8e-82 308.5 205 78.0
Ca_21935_v3 Cicer arietinum L. HOM05D000922 ORTHO05D008200 1.4e-81 306.6 203 78.8
VMungo1215G1163 Vigna mungo HOM05D000922 ORTHO05D008200 1.4e-81 306.6 201 82.1
Medtr4g105570 Medicago truncatula HOM05D000922 ORTHO05D008200 1.9e-81 306.2 202 79.7
Solyc03g112810.3 Solanum lycopersicum HOM05D000922 ORTHO05D008200 2.4e-81 305.8 204 79.9
AL8G40030 Arabidopsis lyrata HOM05D000922 ORTHO05D008200 3.2e-81 305.4 205 76.1
AT5G63000 Arabidopsis thaliana HOM05D000922 ORTHO05D008200 4.2e-81 305.1 205 75.6
Carub.0008s2371 Capsella rubella HOM05D000922 ORTHO05D008200 4.2e-81 305.1 205 75.6
Sabra15G0103100 Salix brachista HOM05D000922 ORTHO05D008200 4.2e-81 305.1 187 84.5
arahy.Tifrunner.gnm1.ann1.RA2V7W Arachis hypogaea HOM05D000922 ORTHO05D008200 7.1e-81 304.3 205 78.5
Cc04_g12150 Coffea canephora HOM05D000922 ORTHO05D008200 7.1e-81 304.3 206 77.7
Phvul.003G201800 Phaseolus vulgaris HOM05D000922 ORTHO05D008200 9.3e-81 303.9 205 79.0
Hund09449 Selenicereus undatus HOM05D000922 ORTHO05D008200 1.6e-80 303.1 205 77.6
Lj5C125T23 Lonicera japonica HOM05D000922 ORTHO05D008200 2.1e-80 302.8 205 78.5
Sopen03g031890 Solanum pennellii HOM05D000922 ORTHO05D008200 2.1e-80 302.8 187 84.0
CANSAT80G0818 Cannabis sativa HOM05D000922 ORTHO05D008200 2.7e-80 302.4 202 77.2
Thhalv10004944m.g Eutrema salsugineum HOM05D000922 ORTHO05D008200 2.7e-80 302.4 205 75.1
FAN04G0130 Fragaria x ananassa HOM05D000922 ORTHO05D008200 2.7e-80 302.4 205 77.1
CARHR276810 Cardamine hirsuta HOM05D000922 ORTHO05D008200 4.6e-80 301.6 205 75.6
FAN13G3248 Fragaria x ananassa HOM05D000922 ORTHO05D008200 7.9e-80 300.8 205 77.1
TAR629G0323 Trochodendron aralioides HOM05D000922 ORTHO05D008200 7.9e-80 300.8 205 77.6
Potri.015G078600 Populus trichocarpa HOM05D000922 ORTHO05D008200 1.0e-79 300.4 199 80.4
FAN18G2418 Fragaria x ananassa HOM05D000922 ORTHO05D008200 1.8e-79 299.7 205 76.6
FAN18G3465 Fragaria x ananassa HOM05D000922 ORTHO05D008200 1.8e-79 299.7 205 76.6
BcaB02g09714 Brassica carinata HOM05D000922 ORTHO05D008200 2.3e-79 299.3 205 74.6
BcaC01g02547 Brassica carinata HOM05D000922 ORTHO05D008200 5.1e-79 298.1 205 73.7
C03p63610 Brassica napus HOM05D000922 ORTHO05D008200 5.1e-79 298.1 205 73.7
BolC3t18619H Brassica oleracea HOM05D000922 ORTHO05D008200 5.1e-79 298.1 205 73.7
BraA06t25925Z Brassica rapa HOM05D000922 ORTHO05D008200 5.1e-79 298.1 205 73.7
Lj4g0019609 Lotus japonicus HOM05D000922 ORTHO05D008200 5.1e-79 298.1 203 76.4
Psat4g058400 Pisum sativum HOM05D000922 ORTHO05D008200 6.7e-79 297.7 206 76.7
FvH4_5g05480 Fragaria vesca HOM05D000922 ORTHO05D008200 8.7e-79 297.4 205 76.1
Peaxi162Scf00089g01850 Petunia axillaris HOM05D000922 ORTHO05D008200 1.1e-78 297.0 206 78.6
PGR044G0925 Punica granatum HOM05D000922 ORTHO05D008200 1.1e-78 297.0 205 74.6
Aqoxy3G02881 Aquilegia oxysepala HOM05D000922 ORTHO05D008200 1.5e-78 296.6 206 76.7
A06p29780 Brassica napus HOM05D000922 ORTHO05D008200 1.9e-78 296.2 205 73.2
AUR62013091 Chenopodium quinoa HOM05D000922 ORTHO05D008200 1.9e-78 296.2 195 75.9
Sp2g26130 Schrenkiella parvula HOM05D000922 ORTHO05D008200 1.9e-78 296.2 200 75.5
Lalb_Chr12g0201661 Lupinus albus HOM05D000922 ORTHO05D008200 3.3e-78 295.4 198 77.8
SGA_v2.0_scaffold90G27896 Striga asiatica HOM05D000922 ORTHO05D008200 3.3e-78 295.4 191 80.1
Lsat_1_v5_gn_5_15061 Lactuca sativa HOM05D000922 ORTHO05D008200 5.6e-78 294.7 198 77.3
SalBow1G6106 Salvia bowleyana HOM05D000922 ORTHO05D008200 1.6e-77 293.1 204 76.0
SalBow5G5253 Salvia bowleyana HOM05D000922 ORTHO05D008200 1.6e-77 293.1 204 76.0
AUR62010095 Chenopodium quinoa HOM05D000922 ORTHO05D008200 2.1e-77 292.7 191 77.0
THA.LOC104818216 Tarenaya hassleriana HOM05D000922 ORTHO05D008200 2.1e-77 292.7 203 74.9
Aa31LG4G16810 Aethionema arabicum HOM05D002875 ORTHO05D003215 5.3e-76 288.1 197 74.6
unitig_0.g1435 Utricularia gibba HOM05D000922 ORTHO05D008200 5.3e-76 288.1 204 73.5
arahy.Tifrunner.gnm1.ann1.3C9G4H Arachis hypogaea HOM05D000922 ORTHO05D008200 2.0e-75 286.2 201 76.1
FAN08G1692 Fragaria x ananassa HOM05D000922 ORTHO05D008200 2.6e-75 285.8 226 69.9
arahy.Tifrunner.gnm1.ann1.R1G0J4 Arachis hypogaea HOM05D000922 ORTHO05D008200 3.4e-75 285.4 196 78.1
Migut.O00114 Erythranthe guttata HOM05D000922 ORTHO05D008200 1.3e-74 283.5 196 74.0
EL10Ac9g21439 Beta vulgaris HOM05D000922 ORTHO05D008200 4.9e-74 281.6 229 66.8
Actinidia04732 Actinidia chinensis HOM05D000922 ORTHO05D007418 6.4e-74 281.2 204 76.0
HPP92_011872 Vanilla planifolia HOM05D000922 ORTHO05D008200 6.4e-74 281.2 201 73.1
ECA246G4361 Erigeron canadensis HOM05D000922 ORTHO05D008200 8.4e-74 280.8 205 72.2
MBI16_g39217_MAGBIO Magnolia biondii HOM05D000922 ORTHO05D008200 7.9e-72 274.2 228 68.0
PSO832G1073 Papaver somniferum HOM05D000922 ORTHO05D008200 4.3e-70 268.5 205 69.3
Os01g0271000 Oryza sativa ssp. japonica HOM05D000922 ORTHO05D008200 7.4e-70 267.7 201 69.7
CDE07G1875 Ceratophyllum demersum HOM05D000922 ORTHO05D008200 4.8e-69 265.0 168 79.8
Dinv38572 Davidia involucrata HOM05D000922 ORTHO05D008200 6.2e-69 264.6 316 52.8
Zm00001eb332970 Zea mays HOM05D000922 ORTHO05D008200 1.1e-68 263.8 204 68.1
Sc04g0001730 Simmondsia chinensis HOM05D000922 ORTHO05D008200 4.5e-67 258.5 161 82.6
arahy.Tifrunner.gnm1.ann1.HJA5XH Arachis hypogaea HOM05D000922 ORTHO05D008200 7.6e-67 257.7 239 61.5
HanXRQChr05g0155781 Helianthus annuus HOM05D000922 ORTHO05D008200 2.1e-61 239.6 168 74.4
SHI38067 Sapria himalayana HOM05D000922 ORTHO05D008200 1.2e-59 233.8 206 61.2
ATR1091G108 Amborella trichopoda HOM05D000922 ORTHO05D008200 4.5e-59 231.9 156 76.9
Cfa019117 Carpinus fangiana HOM05D000922 ORTHO05D008200 1.1e-52 210.7 116 94.0
Manes.05G195400 Manihot esculenta HOM05D000922 ORTHO05D008200 5.3e-52 208.4 132 81.1
TPR.G37467 Trifolium pratense HOM05D000922 ORTHO05D008200 2.0e-51 206.5 126 83.3
arahy.Tifrunner.gnm1.ann1.UWQ2W3 Arachis hypogaea HOM05D000922 ORTHO05D008200 7.7e-51 204.5 135 79.3
arahy.Tifrunner.gnm1.ann1.PQAW0Q Arachis hypogaea HOM05D000922 ORTHO05D008200 8.5e-50 201.1 116 87.1
TAR371G0469 Trochodendron aralioides HOM05D000922 ORTHO05D008200 1.9e-49 199.9 135 77.0
EL10Ac5g12019 Beta vulgaris HOM05D000922 ORTHO05D008200 8.8e-47 191.0 120 79.2
Oeu023435.1 Olea europaea HOM05D000922 ORTHO05D008200 5.7e-46 188.3 106 88.7
SEGI_40590 Sequoiadendron giganteum HOM05D000922 ORTHO05D008200 4.8e-45 185.3 152 63.2
Glyma.05G038900 Glycine max HOM05D000922 ORTHO05D008200 3.1e-44 182.6 108 86.1
arahy.Tifrunner.gnm1.ann1.Q2CJ89 Arachis hypogaea HOM05D000922 ORTHO05D008200 2.0e-38 163.3 148 63.5
Peaxi162Scf00089g01839 Petunia axillaris HOM05D000922 ORTHO05D008200 8.5e-34 147.9 192 49.5
Mapoly0191s0008 Marchantia polymorpha HOM05D000922 ORTHO05D008200 4.7e-32 142.1 185 46.5
AagrBONN_evm.TU.Sc2ySwM_228.4800 Anthoceros agrestis HOM05D000922 ORTHO05D008200 8.8e-31 137.9 179 42.5
TPR.G11031 Trifolium pratense HOM05D000922 ORTHO05D008200 1.3e-29 134.0 93 75.3
arahy.Tifrunner.gnm1.ann1.JAVP2G Arachis hypogaea HOM05D000922 ORTHO05D008200 5.5e-25 118.6 135 52.6
Pp3c17_17380 Physcomitrium patens HOM05D000922 ORTHO05D008200 2.7e-24 116.3 184 40.2
SMO111G0048 Selaginella moellendorffii HOM05D000922 ORTHO05D008200 8.0e-24 114.8 138 44.9
Cpa.g.sc76.32 Carica papaya HOM05D000922 ORTHO05D008200 1.8e-23 113.6 211 40.3
CBR_g38960 Chara braunii HOM05D000922 ORTHO05D008200 4.8e-21 105.5 228 34.2
MCO04G383 Micromonas commoda HOM05D000922 ORTHO05D008200 7.8e-11 71.6 151 32.5
Medtr4g105580 Medicago truncatula HOM05D000922 ORTHO05D008200 4.7e-08 62.4 104 36.5
SGA_v2.0_scaffold25G11050 Striga asiatica HOM05D000922 ORTHO05D403871 8.0e-08 61.6 35 80.0
arahy.Tifrunner.gnm1.ann1.RUR1T0 Arachis hypogaea HOM05D000034 ORTHO05D000037 1.4e-07 60.8 48 62.5
SGA_v2.0_scaffold116G32233 Striga asiatica HOM05D000922 ORTHO05D008200 1.4e-07 60.8 40 67.5
TAR371G0726 Trochodendron aralioides HOM05D000922 ORTHO05D008200 8.9e-07 58.2 33 84.8


User provided reference genes

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