Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G021500 Carya illinoinensis HOM05D000079 ORTHO05D127655 3.9e-90 334.7 162 100.0
CiPaw.07G157600 Carya illinoinensis HOM05D000079 ORTHO05D006933 1.4e-26 123.6 114 61.4
Haze_22546 Corylus avellana HOM05D000079 ORTHO05D006933 1.3e-24 117.1 114 57.0
Cfa013869 Carpinus fangiana HOM05D000079 ORTHO05D006933 4.8e-24 115.2 114 56.1
CSS0031595 Camellia sinensis var. sinensis HOM05D000079 ORTHO05D006933 2.4e-23 112.8 114 53.5
Sabra02G0026100 Salix brachista HOM05D000079 ORTHO05D006933 3.1e-23 112.5 116 54.3
QL02p009521 Quercus lobata HOM05D000079 ORTHO05D006933 2.0e-22 109.8 114 53.5
vmacro21679 Vaccinium macrocarpon HOM05D000079 ORTHO05D006933 2.7e-22 109.4 118 52.5
GSVIVG01009763001 Vitis vinifera HOM05D000079 ORTHO05D006933 2.7e-22 109.4 118 52.5
Potri.005G230900 Populus trichocarpa HOM05D000079 ORTHO05D006933 1.0e-21 107.5 116 52.6
Ciclev10003709m.g Citrus clementina HOM05D000079 ORTHO05D006933 1.3e-21 107.1 116 55.2
Potri.002G032200 Populus trichocarpa HOM05D000079 ORTHO05D006933 1.3e-21 107.1 116 51.7
Prupe.1G374800 Prunus persica HOM05D000079 ORTHO05D006933 1.3e-21 107.1 117 51.3
Rhsim06G0028900 Rhododendron simsii HOM05D000079 ORTHO05D006933 1.7e-21 106.7 117 52.1
MD08G1026100 Malus domestica HOM05D000079 ORTHO05D006933 2.2e-21 106.3 117 50.4
Actinidia15359 Actinidia chinensis HOM05D000079 ORTHO05D006933 2.9e-21 105.9 114 50.0
Manes.18G020700 Manihot esculenta HOM05D000079 ORTHO05D006933 6.5e-21 104.8 114 50.9
Thecc.08G032600 Theobroma cacao HOM05D000079 ORTHO05D006933 1.5e-20 103.6 114 50.9
Sabra05G0178300 Salix brachista HOM05D000079 ORTHO05D006933 1.9e-20 103.2 115 54.8
MD15G1022800 Malus domestica HOM05D000079 ORTHO05D006933 2.5e-20 102.8 117 49.6
Dinv04826 Davidia involucrata HOM05D000079 ORTHO05D006933 5.5e-20 101.7 116 47.4
Dinv31783 Davidia involucrata HOM05D000079 ORTHO05D006933 5.5e-20 101.7 116 47.4
TWI12G0527 Tripterygium wilfordii HOM05D000079 ORTHO05D006933 9.4e-20 100.9 118 49.2
Manes.05G155400 Manihot esculenta HOM05D000079 ORTHO05D006933 1.2e-19 100.5 114 51.8
Nn5g29697 Nelumbo nucifera HOM05D000079 ORTHO05D006933 1.2e-19 100.5 115 49.6
TAR628G0508 Trochodendron aralioides HOM05D000079 ORTHO05D006933 1.2e-19 100.5 117 49.6
Duzib116G0788 Durio zibethinus HOM05D000079 ORTHO05D006933 1.6e-19 100.1 114 49.1
Atru.chr13.416 Acer truncatum HOM05D000079 ORTHO05D006933 8.0e-19 97.8 116 50.0
Lj4A35T44 Lonicera japonica HOM05D000079 ORTHO05D006933 8.0e-19 97.8 114 47.4
Dinv39451 Davidia involucrata HOM05D000079 ORTHO05D006933 1.8e-18 96.7 116 48.3
CDE07G1726 Ceratophyllum demersum HOM05D000079 ORTHO05D006933 2.3e-18 96.3 95 52.6
Duzib093G0541 Durio zibethinus HOM05D000079 ORTHO05D006933 2.3e-18 96.3 116 50.0
CANSAT25G3258 Cannabis sativa HOM05D000079 ORTHO05D006933 5.2e-18 95.1 117 47.0
Nn1g05817 Nelumbo nucifera HOM05D000079 ORTHO05D006933 8.8e-18 94.4 115 46.1
FvH4_2g39380 Fragaria vesca HOM05D000079 ORTHO05D006933 1.2e-17 94.0 114 48.2
FAN15G3710 Fragaria x ananassa HOM05D000079 ORTHO05D006933 1.2e-17 94.0 114 48.2
FAN20G3213 Fragaria x ananassa HOM05D000079 ORTHO05D006933 1.2e-17 94.0 114 48.2
FAN26G2717 Fragaria x ananassa HOM05D000079 ORTHO05D006933 1.2e-17 94.0 114 48.2
FAN27G1647 Fragaria x ananassa HOM05D000079 ORTHO05D006933 1.2e-17 94.0 114 48.2
COL.COLO4_26251 Corchorus olitorius HOM05D000079 ORTHO05D006933 2.0e-17 93.2 117 44.4
MBI10_g00748_MAGBIO Magnolia biondii HOM05D000079 ORTHO05D006933 2.0e-17 93.2 114 46.5
Aqoxy3G02272 Aquilegia oxysepala HOM05D000079 ORTHO05D006933 2.6e-17 92.8 115 45.2
AL1G41150 Arabidopsis lyrata HOM05D000079 ORTHO05D006933 2.6e-17 92.8 117 50.4
Lalb_Chr08g0245951 Lupinus albus HOM05D000079 ORTHO05D006933 2.6e-17 92.8 120 47.5
SalBow7G4195 Salvia bowleyana HOM05D000079 ORTHO05D006933 2.6e-17 92.8 120 46.7
Oeu030593.1 Olea europaea HOM05D000079 ORTHO05D006933 3.4e-17 92.4 114 44.7
RcHm_v2.0_Chr6g0301621 Rosa chinensis HOM05D000079 ORTHO05D006933 3.4e-17 92.4 114 47.4
Aqoxy6G01180 Aquilegia oxysepala HOM05D000079 ORTHO05D006933 4.4e-17 92.0 115 45.2
Lj5g0010160 Lotus japonicus HOM05D000079 ORTHO05D006933 4.4e-17 92.0 118 49.2
HPP92_013421 Vanilla planifolia HOM05D000079 ORTHO05D006933 5.7e-17 91.7 116 44.0
AT1G27620 Arabidopsis thaliana HOM05D000079 ORTHO05D006933 7.5e-17 91.3 118 49.2
CARHR134190 Cardamine hirsuta HOM05D000079 ORTHO05D006933 1.3e-16 90.5 118 48.3
Glyma.06G029900 Glycine max HOM05D000079 ORTHO05D006933 1.7e-16 90.1 116 46.6
PGR031G1553 Punica granatum HOM05D000079 ORTHO05D006933 1.7e-16 90.1 123 43.9
PSO675G4095 Papaver somniferum HOM05D000079 ORTHO05D006933 2.2e-16 89.7 116 46.6
CDE06G1409 Ceratophyllum demersum HOM05D000079 ORTHO05D006933 2.8e-16 89.4 114 45.6
Gohir.D06G003500 Gossypium hirsutum HOM05D000079 ORTHO05D006933 3.7e-16 89.0 119 48.7
Gorai.010G008100 Gossypium raimondii HOM05D000079 ORTHO05D006933 3.7e-16 89.0 119 48.7
MSTRG.25197 Avicennia marina HOM05D000079 ORTHO05D006933 4.8e-16 88.6 116 45.7
Ca_02081_v3 Cicer arietinum L. HOM05D000079 ORTHO05D020150 4.8e-16 88.6 119 47.9
Ca_02083_v3 Cicer arietinum L. HOM05D000079 ORTHO05D020150 4.8e-16 88.6 119 47.9
Ca_29782_v3 Cicer arietinum L. HOM05D000079 ORTHO05D006933 4.8e-16 88.6 119 47.9
A09p38430 Brassica napus HOM05D000079 ORTHO05D006933 6.3e-16 88.2 122 47.5
C05p26250 Brassica napus HOM05D000079 ORTHO05D020150 6.3e-16 88.2 118 48.3
BraA09t39352Z Brassica rapa HOM05D000079 ORTHO05D006933 6.3e-16 88.2 118 48.3
Cc10_g02480 Coffea canephora HOM05D000079 ORTHO05D006933 6.3e-16 88.2 116 43.1
Thhalv10007633m.g Eutrema salsugineum HOM05D000079 ORTHO05D006933 6.3e-16 88.2 118 46.6
Nitab4.5_0006379g0010 Nicotiana tabacum HOM05D000079 ORTHO05D006933 6.3e-16 88.2 117 41.0
Eucgr.F01597 Eucalyptus grandis HOM05D000079 ORTHO05D006933 1.1e-15 87.4 128 46.9
Aa31sc143G20 Aethionema arabicum HOM05D000079 ORTHO05D006933 1.4e-15 87.0 117 45.3
Nitab4.5_0001861g0020 Nicotiana tabacum HOM05D000079 ORTHO05D006933 1.4e-15 87.0 117 41.9
Gohir.A06G007000 Gossypium hirsutum HOM05D000079 ORTHO05D006933 1.8e-15 86.7 117 47.0
PSO541G2710 Papaver somniferum HOM05D000079 ORTHO05D006933 1.8e-15 86.7 116 44.8
Peaxi162Scf00140g01012 Petunia axillaris HOM05D000079 ORTHO05D006933 1.8e-15 86.7 117 41.9
Sp1g23840 Schrenkiella parvula HOM05D000079 ORTHO05D006933 1.8e-15 86.7 118 46.6
BcaC01g01586 Brassica carinata HOM05D000079 ORTHO05D006933 2.4e-15 86.3 118 47.5
A08p26160 Brassica napus HOM05D000079 ORTHO05D006933 2.4e-15 86.3 118 47.5
BolC3t19692H Brassica oleracea HOM05D000079 ORTHO05D006933 2.4e-15 86.3 118 47.5
BraA08t34566Z Brassica rapa HOM05D000079 ORTHO05D006933 2.4e-15 86.3 118 47.5
ATR0585G138 Amborella trichopoda HOM05D000079 ORTHO05D006933 3.1e-15 85.9 116 43.1
C03p74390 Brassica napus HOM05D000079 ORTHO05D006933 3.1e-15 85.9 118 47.5
Lsat_1_v5_gn_5_26801 Lactuca sativa HOM05D000079 ORTHO05D006933 3.1e-15 85.9 124 43.5
Psat5g015800 Pisum sativum HOM05D000079 ORTHO05D006933 5.4e-15 85.1 126 42.9
PGR083G0166 Punica granatum HOM05D000079 ORTHO05D006933 5.4e-15 85.1 121 46.3
BcaC05g26757 Brassica carinata HOM05D000079 ORTHO05D006933 7.0e-15 84.7 118 45.8
Medtr3g112180 Medicago truncatula HOM05D000079 ORTHO05D006933 7.0e-15 84.7 120 45.8
Cpa.g.sc99.30 Carica papaya HOM05D000079 ORTHO05D006933 9.1e-15 84.3 119 45.4
Sed0025914 Sechium edule HOM05D000079 ORTHO05D006933 1.2e-14 84.0 118 44.9
HanXRQChr03g0069671 Helianthus annuus HOM05D000079 ORTHO05D020150 1.6e-14 83.6 121 41.3
MSTRG.1252 Avicennia marina HOM05D000079 ORTHO05D006933 2.0e-14 83.2 115 46.1
CsaV3_2G028970 Cucumis sativus L. HOM05D000079 ORTHO05D006933 2.7e-14 82.8 121 44.6
DCAR_000388 Daucus carota HOM05D000079 ORTHO05D006933 2.7e-14 82.8 121 43.0
MELO3C010965.2 Cucumis melo HOM05D000079 ORTHO05D006933 3.5e-14 82.4 121 44.6
SHI08127 Sapria himalayana HOM05D000079 ORTHO05D006933 4.5e-14 82.0 115 39.1
PGSC0003DMG400003747 Solanum tuberosum HOM05D000079 ORTHO05D006933 1.0e-13 80.9 116 39.7
TPR.G34565 Trifolium pratense HOM05D000079 ORTHO05D006933 1.0e-13 80.9 120 40.8
AUR62034510 Chenopodium quinoa HOM05D000079 ORTHO05D020150 1.3e-13 80.5 124 43.5
ClCG05G018720 Citrullus lanatus HOM05D000079 ORTHO05D006933 1.3e-13 80.5 116 42.2
EL10Ac1g00626 Beta vulgaris HOM05D000079 ORTHO05D006933 1.7e-13 80.1 128 43.0
HanXRQChr05g0151281 Helianthus annuus HOM05D000079 ORTHO05D006933 1.7e-13 80.1 122 43.4
TPR.G989 Trifolium pratense HOM05D000079 ORTHO05D006933 1.7e-13 80.1 121 43.0
THA.LOC104822832 Tarenaya hassleriana HOM05D000079 ORTHO05D006933 2.2e-13 79.7 120 40.0
arahy.Tifrunner.gnm1.ann1.GSJ1T0 Arachis hypogaea HOM05D000079 ORTHO05D006933 2.9e-13 79.3 120 44.2
arahy.Tifrunner.gnm1.ann1.L9LUFQ Arachis hypogaea HOM05D000079 ORTHO05D006933 2.9e-13 79.3 120 44.2
Ca_01386_v3 Cicer arietinum L. HOM05D000079 ORTHO05D006933 2.9e-13 79.3 108 45.4
ClCG08G014780 Citrullus lanatus HOM05D000079 ORTHO05D006933 2.9e-13 79.3 125 38.4
Migut.C00764 Erythranthe guttata HOM05D000079 ORTHO05D006933 2.9e-13 79.3 116 40.5
Hund26900 Selenicereus undatus HOM05D000079 ORTHO05D006933 2.9e-13 79.3 129 39.5
Solyc04g080720.4 Solanum lycopersicum HOM05D000079 ORTHO05D006933 2.9e-13 79.3 116 39.7
AUR62014488 Chenopodium quinoa HOM05D000079 ORTHO05D006933 5.0e-13 78.6 126 42.1
Ca_01385_v3 Cicer arietinum L. HOM05D000079 ORTHO05D006933 5.0e-13 78.6 107 44.9
CsaV3_3G045460 Cucumis sativus L. HOM05D000079 ORTHO05D006933 6.5e-13 78.2 121 40.5
Carub.0001s2613 Capsella rubella HOM05D000079 ORTHO05D006933 8.5e-13 77.8 119 44.5
Sc26g0003400 Simmondsia chinensis HOM05D000079 ORTHO05D006933 2.5e-12 76.3 121 40.5
VMungo1309G0022 Vigna mungo HOM05D000079 ORTHO05D006933 2.5e-12 76.3 116 43.1
Phvul.009G061200 Phaseolus vulgaris HOM05D000079 ORTHO05D006933 3.2e-12 75.9 116 44.8
PSO144G0012 Papaver somniferum HOM05D000079 ORTHO05D006933 3.6e-11 72.4 120 37.5
SGA_v2.0_scaffold201G41373 Striga asiatica HOM05D000079 ORTHO05D006933 6.8e-10 68.2 112 40.2
Zm00001eb126880 Zea mays HOM05D000079 ORTHO05D006933 8.8e-10 67.8 128 35.2
PSO170G4841 Papaver somniferum HOM05D000079 ORTHO05D006933 1.5e-09 67.0 121 36.4
PSO144G0067 Papaver somniferum HOM05D000079 ORTHO05D006933 2.0e-09 66.6 121 38.0
PSO729G0162 Papaver somniferum HOM05D000079 ORTHO05D006933 2.0e-09 66.6 110 37.3
Sc26g0003420 Simmondsia chinensis HOM05D000079 ORTHO05D006933 7.5e-09 64.7 126 36.5
Ca_27199_v3 Cicer arietinum L. HOM05D000356 ORTHO05D000265 1.3e-08 63.9 92 42.4
Ca_11175_v3 Cicer arietinum L. HOM05D000356 ORTHO05D000265 3.1e-07 59.3 92 40.2
SEGI_26809 Sequoiadendron giganteum HOM05D000079 ORTHO05D006933 4.5e-06 55.5 124 33.1


User provided reference genes

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