Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G008100 Carya illinoinensis HOM05D005744 ORTHO05D007503 2.0e-239 832.0 424 100.0
Cfa018827 Carpinus fangiana HOM05D005744 ORTHO05D007503 1.1e-203 713.4 426 85.7
QL10p003203 Quercus lobata HOM05D005744 ORTHO05D007503 4.3e-197 691.4 423 83.7
GSVIVG01008538001 Vitis vinifera HOM05D005744 ORTHO05D007503 7.3e-197 690.6 424 77.6
COL.COLO4_28103 Corchorus olitorius HOM05D005744 ORTHO05D007503 8.6e-190 667.2 425 78.1
Haze_07221 Corylus avellana HOM05D005744 ORTHO05D007503 1.1e-189 666.8 484 74.0
Manes.14G051500 Manihot esculenta HOM05D005744 ORTHO05D007503 4.3e-189 664.8 427 75.2
Gorai.008G206000 Gossypium raimondii HOM05D005744 ORTHO05D007503 5.6e-189 664.5 424 76.2
Gohir.D12G191700 Gossypium hirsutum HOM05D005744 ORTHO05D007503 3.6e-188 661.8 424 75.7
Ciclev10020324m.g Citrus clementina HOM05D005744 ORTHO05D007503 1.4e-187 659.8 421 75.8
Atru.chr9.1122 Acer truncatum HOM05D005744 ORTHO05D007503 1.8e-187 659.4 421 75.1
Gohir.A12G189400 Gossypium hirsutum HOM05D005744 ORTHO05D007503 1.8e-187 659.4 424 75.5
Thecc.03G128600 Theobroma cacao HOM05D005744 ORTHO05D007503 1.5e-186 656.4 424 74.8
CSS0041302 Camellia sinensis var. sinensis HOM05D005744 ORTHO05D007503 1.4e-184 649.8 425 75.8
Potri.015G095400 Populus trichocarpa HOM05D005744 ORTHO05D007503 1.9e-184 649.4 422 73.9
arahy.Tifrunner.gnm1.ann1.SJIN4P Arachis hypogaea HOM05D005744 ORTHO05D007503 1.6e-183 646.4 424 72.9
arahy.Tifrunner.gnm1.ann1.DQ5P63 Arachis hypogaea HOM05D005744 ORTHO05D007503 6.0e-183 644.4 424 73.1
Sabra15G0116400 Salix brachista HOM05D005744 ORTHO05D007503 1.3e-182 643.3 426 74.9
Prupe.5G151700 Prunus persica HOM05D005744 ORTHO05D007503 1.9e-181 639.4 424 78.3
Nn3g16475 Nelumbo nucifera HOM05D005744 ORTHO05D007503 1.2e-180 636.7 421 72.2
Sed0005313 Sechium edule HOM05D005744 ORTHO05D007503 2.8e-180 635.6 434 71.9
CANSAT80G0573 Cannabis sativa HOM05D005744 ORTHO05D007503 4.0e-179 631.7 424 73.8
Lj1g0015277 Lotus japonicus HOM05D005744 ORTHO05D007503 1.5e-178 629.8 424 71.9
Rhsim08G0189700 Rhododendron simsii HOM05D005744 ORTHO05D007503 1.5e-178 629.8 421 77.2
Lalb_Chr08g0237111 Lupinus albus HOM05D005744 ORTHO05D007503 2.0e-178 629.4 427 71.2
Ca_24503_v3 Cicer arietinum L. HOM05D005744 ORTHO05D007503 9.9e-178 627.1 425 73.2
MELO3C026209.2 Cucumis melo HOM05D005744 ORTHO05D007503 1.3e-177 626.7 422 72.0
PGR044G2189 Punica granatum HOM05D005744 ORTHO05D007503 1.3e-177 626.7 387 78.3
ClCG06G017860 Citrullus lanatus HOM05D005744 ORTHO05D007503 2.2e-177 625.9 422 72.0
Psat5g140680 Pisum sativum HOM05D005744 ORTHO05D007503 2.2e-177 625.9 424 70.5
RhsimUnG0231400 Rhododendron simsii HOM05D005744 ORTHO05D007503 2.9e-177 625.5 421 76.7
THA.LOC104825016 Tarenaya hassleriana HOM05D005744 ORTHO05D007503 4.9e-177 624.8 422 72.3
Oeu010732.1 Olea europaea HOM05D005744 ORTHO05D007503 5.4e-176 621.3 430 71.4
CsaV3_1G000590 Cucumis sativus L. HOM05D005744 ORTHO05D007503 7.1e-176 620.9 430 70.0
MD14G1157700 Malus domestica HOM05D005744 ORTHO05D007503 1.2e-175 620.2 422 75.1
HanXRQChr16g0498211 Helianthus annuus HOM05D005744 ORTHO05D007503 2.1e-175 619.4 424 71.2
Medtr3g074980 Medicago truncatula HOM05D005744 ORTHO05D007503 3.9e-174 615.1 426 70.4
Peaxi162Scf00074g00136 Petunia axillaris HOM05D005744 ORTHO05D007503 3.9e-174 615.1 424 71.9
BraA03t14628Z Brassica rapa HOM05D005744 ORTHO05D007503 1.5e-173 613.2 426 70.0
CARHR232280 Cardamine hirsuta HOM05D005744 ORTHO05D007503 2.5e-173 612.5 421 70.1
Cc08_g16880 Coffea canephora HOM05D005744 ORTHO05D007503 3.3e-173 612.1 424 72.9
AL7G28320 Arabidopsis lyrata HOM05D005744 ORTHO05D007503 4.3e-173 611.7 421 69.6
EL10As4g23384 Beta vulgaris HOM05D005744 ORTHO05D007503 9.6e-173 610.5 424 70.8
BcaC06g32852 Brassica carinata HOM05D005744 ORTHO05D007503 1.3e-172 610.1 426 70.0
Migut.E00304 Erythranthe guttata HOM05D005744 ORTHO05D007503 1.3e-172 610.1 429 70.2
Lsat_1_v5_gn_4_80081 Lactuca sativa HOM05D005744 ORTHO05D007503 2.8e-172 609.0 424 69.1
BolC7t45875H Brassica oleracea HOM05D005744 ORTHO05D007503 1.1e-171 607.1 426 69.7
TPR.G26152 Trifolium pratense HOM05D005744 ORTHO05D007503 1.4e-171 606.7 425 69.6
A03p55610 Brassica napus HOM05D005744 ORTHO05D007503 1.8e-171 606.3 426 69.7
Sp7g22860 Schrenkiella parvula HOM05D005744 ORTHO05D007503 4.0e-171 605.1 421 69.6
MSTRG.13706 Avicennia marina HOM05D005744 ORTHO05D007503 5.3e-171 604.7 426 69.2
C07p53850 Brassica napus HOM05D005744 ORTHO05D007503 6.9e-171 604.4 426 69.5
VMungo1309G1043 Vigna mungo HOM05D005744 ORTHO05D007503 1.2e-170 603.6 430 72.6
Carub.0007s1619 Capsella rubella HOM05D005744 ORTHO05D007503 1.5e-170 603.2 425 68.9
Phvul.009G166600 Phaseolus vulgaris HOM05D005744 ORTHO05D007503 2.0e-170 602.8 434 71.9
Aqoxy3G01542 Aquilegia oxysepala HOM05D005744 ORTHO05D007503 2.6e-170 602.4 424 67.2
ECA232G3603 Erigeron canadensis HOM05D005744 ORTHO05D007503 2.6e-170 602.4 423 69.5
DCAR_021616 Daucus carota HOM05D005744 ORTHO05D007503 7.6e-170 600.9 434 68.2
Thhalv10025348m.g Eutrema salsugineum HOM05D005744 ORTHO05D007503 1.7e-169 599.7 411 70.6
Glyma.06G170500 Glycine max HOM05D005744 ORTHO05D007503 6.4e-169 597.8 424 69.3
Duzib205G1133 Durio zibethinus HOM05D005744 ORTHO05D007503 1.9e-168 596.3 421 70.3
TPR.G12158 Trifolium pratense HOM05D005744 ORTHO05D007503 2.4e-168 595.9 425 70.8
Solyc08g083260.3 Solanum lycopersicum HOM05D005744 ORTHO05D007503 4.6e-167 591.7 435 68.3
PGSC0003DMG400012114 Solanum tuberosum HOM05D005744 ORTHO05D007503 4.6e-167 591.7 435 68.7
Sopen08g031450 Solanum pennellii HOM05D005744 ORTHO05D007503 1.8e-166 589.7 435 68.0
Eucgr.K02730 Eucalyptus grandis HOM05D005744 ORTHO05D007503 2.3e-166 589.3 442 70.1
Ah.02g114920 Amaranthus hybridus HOM05D005744 ORTHO05D007503 3.0e-166 589.0 452 68.6
Nitab4.5_0002720g0090 Nicotiana tabacum HOM05D005744 ORTHO05D007503 5.1e-166 588.2 457 65.9
Actinidia25578 Actinidia chinensis HOM05D005744 ORTHO05D007503 6.7e-166 587.8 385 77.4
MBI07_g31012_MAGBIO Magnolia biondii HOM05D005744 ORTHO05D007503 3.7e-164 582.0 426 71.4
PSO339G3552 Papaver somniferum HOM05D005744 ORTHO05D007503 2.6e-162 575.9 418 69.1
PSO782G2798 Papaver somniferum HOM05D005744 ORTHO05D007503 5.8e-162 574.7 418 66.0
PSO801G0019 Papaver somniferum HOM05D005744 ORTHO05D007503 1.3e-161 573.5 418 68.2
HPP92_020223 Vanilla planifolia HOM05D005744 ORTHO05D007503 3.8e-161 572.0 433 63.3
vmacro19203 Vaccinium macrocarpon HOM05D005744 ORTHO05D007503 6.4e-161 571.2 476 62.4
RcHm_v2.0_Chr7g0190291 Rosa chinensis HOM05D005744 ORTHO05D007503 1.4e-160 570.1 421 67.5
Actinidia33099 Actinidia chinensis HOM05D005744 ORTHO05D007503 1.9e-160 569.7 337 79.2
SalBow5G0293 Salvia bowleyana HOM05D005744 ORTHO05D007503 3.2e-160 568.9 435 69.4
Dinv11169 Davidia involucrata HOM05D005744 ORTHO05D007503 3.0e-158 562.4 424 66.7
FAN18G3767 Fragaria x ananassa HOM05D005744 ORTHO05D007503 3.9e-158 562.0 421 68.4
AUR62025939 Chenopodium quinoa HOM05D005744 ORTHO05D007503 5.1e-158 561.6 393 71.2
AUR62029618 Chenopodium quinoa HOM05D005744 ORTHO05D007503 8.7e-158 560.8 390 69.5
FvH4_5g08230 Fragaria vesca HOM05D005744 ORTHO05D007503 2.1e-156 556.2 421 67.9
FAN08G2910 Fragaria x ananassa HOM05D005744 ORTHO05D007503 2.1e-156 556.2 421 68.9
ATR0561G060 Amborella trichopoda HOM05D005744 ORTHO05D007503 1.1e-155 553.9 429 64.1
CDE05G2332 Ceratophyllum demersum HOM05D005744 ORTHO05D007503 4.5e-154 548.5 421 63.2
Os01g0101300 Oryza sativa ssp. japonica HOM05D005744 ORTHO05D007503 4.9e-153 545.0 424 64.2
FAN13G0489 Fragaria x ananassa HOM05D005744 ORTHO05D007503 3.2e-152 542.3 461 61.2
CAN.G567.98 Capsicum annuum HOM05D005744 ORTHO05D007503 2.7e-151 539.3 448 63.2
Lj9A478G92 Lonicera japonica HOM05D005744 ORTHO05D007503 1.3e-148 530.4 390 68.7
TAR629G2476 Trochodendron aralioides HOM05D005744 ORTHO05D007503 2.4e-147 526.2 331 74.6
Glyma.04G195500 Glycine max HOM05D005744 ORTHO05D007503 1.4e-142 510.4 319 74.3
RcHm_v2.0_Chr4g0409241 Rosa chinensis HOM05D005744 ORTHO05D007503 1.8e-142 510.0 421 63.2
SGA_v2.0_scaffold22G09828 Striga asiatica HOM05D005744 ORTHO05D007503 6.7e-142 508.1 414 63.3
Sc04g0000680 Simmondsia chinensis HOM05D005744 ORTHO05D007503 1.9e-141 506.5 300 78.3
AT4G24880 Arabidopsis thaliana HOM05D005744 ORTHO05D007503 6.3e-140 501.5 342 69.9
TAR633G0019 Trochodendron aralioides HOM05D005744 ORTHO05D007503 7.7e-138 494.6 307 74.3
Aa31LG7G10960 Aethionema arabicum HOM05D005744 ORTHO05D007503 1.3e-137 493.8 302 76.5
Cpa.g.sc2981.2 Carica papaya HOM05D005744 ORTHO05D007503 3.8e-137 492.3 310 75.5
Zm00001eb354570 Zea mays HOM05D005744 ORTHO05D007503 2.5e-136 489.6 422 62.6
PSO478G2520 Papaver somniferum HOM05D005744 ORTHO05D007503 2.7e-127 459.5 341 64.8
FvH4_4g11820 Fragaria vesca HOM05D005744 ORTHO05D007503 8.8e-126 454.5 418 57.2
FAN07G2643 Fragaria x ananassa HOM05D005744 ORTHO05D007503 1.5e-125 453.8 330 68.2
SalBow5G5674 Salvia bowleyana HOM05D005744 ORTHO05D007503 3.7e-124 449.1 435 58.6
unitig_27.g25288 Utricularia gibba HOM05D005744 ORTHO05D007503 1.1e-123 447.6 421 54.4
Mapoly0024s0037 Marchantia polymorpha HOM05D005744 ORTHO05D007503 3.8e-121 439.1 434 51.4
SMO364G0648 Selaginella moellendorffii HOM05D005744 ORTHO05D007503 1.5e-117 427.2 409 52.6
Pp3c8_11540 Physcomitrium patens HOM05D005744 ORTHO05D007503 2.8e-116 422.9 432 50.0
Nitab4.5_0000479g0030 Nicotiana tabacum HOM05D005744 ORTHO05D007503 1.5e-101 374.0 278 67.6
FAN12G3536 Fragaria x ananassa HOM05D005744 ORTHO05D007503 1.7e-100 370.5 317 58.7
SEGI_05259 Sequoiadendron giganteum HOM05D005744 ORTHO05D007503 4.5e-98 362.5 316 55.7
FAN12G3591 Fragaria x ananassa HOM05D005744 ORTHO05D007503 2.2e-92 343.6 299 57.5
Eucgr.L02977 Eucalyptus grandis HOM05D005744 ORTHO05D007503 8.0e-87 325.1 277 67.1
SEGI_21905 Sequoiadendron giganteum HOM05D005744 ORTHO05D007503 1.7e-76 290.8 183 67.8
MCO07G390 Micromonas commoda HOM05D005744 ORTHO05D007503 5.8e-69 265.8 452 36.9
AagrBONN_evm.TU.Sc2ySwM_344.2997 Anthoceros agrestis HOM05D005744 ORTHO05D007503 3.8e-68 263.1 217 54.8
SHI06365 Sapria himalayana HOM05D005744 ORTHO05D007503 4.9e-68 262.7 374 41.4
Cre16.g666000 Chlamydomonas reinhardtii HOM05D005744 ORTHO05D007503 8.7e-57 225.3 584 29.3
PRCOL_00001155 Prasinoderma coloniale HOM05D005744 ORTHO05D007503 4.3e-56 223.0 416 35.8
COL.COLO4_31215 Corchorus olitorius HOM05D005744 ORTHO05D007503 4.3e-48 196.4 129 76.0
RcHm_v2.0_Chr4g0407951 Rosa chinensis HOM05D005744 ORTHO05D007503 4.3e-48 196.4 250 46.0
HanXRQChr10g0289761 Helianthus annuus HOM05D005744 ORTHO05D007503 1.8e-46 191.0 202 48.5
GSVIVG01008540001 Vitis vinifera HOM05D005744 ORTHO05D007503 3.4e-45 186.8 119 76.5
QL10p003231 Quercus lobata HOM05D005744 ORTHO05D007503 8.4e-44 182.2 117 75.2
Lsat_1_v5_gn_8_77640 Lactuca sativa HOM05D005744 ORTHO05D007503 1.8e-41 174.5 116 71.6
Aa31LG7G10970 Aethionema arabicum HOM05D005744 ORTHO05D007503 1.3e-28 131.7 126 60.3
CDE12G0192 Ceratophyllum demersum HOM05D005744 ORTHO05D007503 3.3e-24 117.1 144 47.9
RcHm_v2.0_Chr4g0407901 Rosa chinensis HOM05D005744 ORTHO05D007503 1.1e-22 112.1 252 34.9
Lsat_1_v5_gn_8_150141 Lactuca sativa HOM05D005744 ORTHO05D048266 9.1e-22 109.0 107 50.5
TAR629G1577 Trochodendron aralioides HOM05D005744 ORTHO05D007503 4.4e-16 90.1 60 71.7
SEGI_17145 Sequoiadendron giganteum HOM05D005744 ORTHO05D007503 3.9e-09 67.0 60 58.3
HanXRQChr10g0289791 Helianthus annuus HOM05D005744 ORTHO05D048266 7.4e-08 62.8 48 60.4
CDE05G3540 Ceratophyllum demersum HOM05D005744 ORTHO05D130478 9.7e-08 62.4 108 38.0


User provided reference genes

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