Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G007000 Carya illinoinensis HOM05D005335 ORTHO05D006472 5.9e-68 261.2 176 100.0
Haze_07140 Corylus avellana HOM05D005335 ORTHO05D006472 3.0e-43 179.1 173 80.9
Cfa018794 Carpinus fangiana HOM05D005335 ORTHO05D006472 3.9e-43 178.7 175 81.1
Duzib205G0334 Durio zibethinus HOM05D005335 ORTHO05D006472 1.4e-40 170.2 174 70.7
Duzib084G1383 Durio zibethinus HOM05D005335 ORTHO05D006472 5.2e-40 168.3 174 58.6
TAR371G0199 Trochodendron aralioides HOM05D005335 ORTHO05D006472 1.2e-39 167.2 176 67.6
Thecc.03G129400 Theobroma cacao HOM05D005335 ORTHO05D006472 1.3e-38 163.7 174 72.4
COL.COLO4_28131 Corchorus olitorius HOM05D005335 ORTHO05D006472 1.1e-37 160.6 178 71.9
QL10p002879 Quercus lobata HOM05D005335 ORTHO05D006472 2.4e-37 159.5 183 67.2
Potri.012G097901 Populus trichocarpa HOM05D005335 ORTHO05D006472 1.3e-35 153.7 179 68.7
Manes.06G119800 Manihot esculenta HOM05D005335 ORTHO05D006472 3.0e-35 152.5 177 73.4
Hma1.2p1_0014F.1_g009400 Hydrangea macrophylla HOM05D005335 ORTHO05D006472 3.3e-34 149.1 176 68.8
TAR629G1091 Trochodendron aralioides HOM05D005335 ORTHO05D006472 3.3e-34 149.1 174 69.5
Nn3g16458 Nelumbo nucifera HOM05D005335 ORTHO05D006472 9.5e-34 147.5 174 52.9
Sabra15G0117300 Salix brachista HOM05D005335 ORTHO05D006472 9.5e-34 147.5 174 66.7
TWI39G0987 Tripterygium wilfordii HOM05D005335 ORTHO05D006472 1.8e-32 143.3 176 72.7
MELO3C026206.2 Cucumis melo HOM05D005335 ORTHO05D006472 1.5e-31 140.2 176 71.6
Potri.015G096500 Populus trichocarpa HOM05D005335 ORTHO05D006472 1.5e-31 140.2 175 68.6
CiPaw.12G043300 Carya illinoinensis HOM05D005335 ORTHO05D006472 2.6e-31 139.4 159 70.4
Nn4g22311 Nelumbo nucifera HOM05D005335 ORTHO05D006472 4.4e-31 138.7 174 71.8
Atru.chr6.1795 Acer truncatum HOM05D005335 ORTHO05D006472 1.7e-30 136.7 178 66.3
ClCG06G017900 Citrullus lanatus HOM05D005335 ORTHO05D006472 2.2e-30 136.3 178 70.2
Cpa.g.sc13.114 Carica papaya HOM05D005335 ORTHO05D006472 6.4e-30 134.8 180 67.2
Dinv11173 Davidia involucrata HOM05D001420 ORTHO05D002488 1.9e-29 133.3 173 55.5
CsaV3_1G000550 Cucumis sativus L. HOM05D005335 ORTHO05D006472 4.1e-29 132.1 176 71.0
Sabra12G0071600 Salix brachista HOM05D005335 ORTHO05D006472 9.2e-29 131.0 161 66.5
Rhsim08G0190300 Rhododendron simsii HOM05D005335 ORTHO05D006472 1.2e-28 130.6 175 57.7
MSTRG.11283 Avicennia marina HOM05D005335 ORTHO05D006472 2.1e-28 129.8 176 57.4
Gorai.009G431200 Gossypium raimondii HOM05D005335 ORTHO05D006472 4.6e-28 128.6 174 46.6
Gohir.D05G361600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 7.8e-28 127.9 174 46.6
Lsat_1_v5_gn_4_80981 Lactuca sativa HOM05D005335 ORTHO05D006472 7.8e-28 127.9 173 64.2
vmacro19206 Vaccinium macrocarpon HOM05D005335 ORTHO05D006472 1.7e-27 126.7 176 56.8
Ciclev10032959m.g Citrus clementina HOM05D005335 ORTHO05D006472 2.3e-27 126.3 178 68.0
Gohir.D07G055600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 1.1e-26 124.0 173 63.6
Gorai.001G058900 Gossypium raimondii HOM05D005335 ORTHO05D006472 1.1e-26 124.0 173 63.6
Oeu023482.1 Olea europaea HOM05D005335 ORTHO05D006472 1.9e-26 123.2 174 60.3
PGR044G0086 Punica granatum HOM05D005335 ORTHO05D006472 2.5e-26 122.9 176 57.4
MD06G1141500 Malus domestica HOM05D005335 ORTHO05D006472 4.3e-26 122.1 177 65.0
Gohir.A07G051200 Gossypium hirsutum HOM05D005335 ORTHO05D006472 9.6e-26 120.9 173 63.6
Dinv23148 Davidia involucrata HOM05D005335 ORTHO05D006472 4.7e-25 118.6 120 61.7
RcHm_v2.0_Chr7g0190101 Rosa chinensis HOM05D005335 ORTHO05D006472 6.2e-25 118.2 178 64.6
DCAR_016388 Daucus carota HOM05D005335 ORTHO05D006472 8.1e-25 117.9 178 56.7
MD14G1156700 Malus domestica HOM05D005335 ORTHO05D006472 8.1e-25 117.9 177 64.4
TWI23G0456 Tripterygium wilfordii HOM05D005335 ORTHO05D006472 8.1e-25 117.9 174 65.5
Oeu045458.1 Olea europaea HOM05D005335 ORTHO05D006472 1.1e-24 117.5 173 59.5
Oeu045459.1 Olea europaea HOM05D005335 ORTHO05D006472 1.1e-24 117.5 173 59.5
FAN04G0838 Fragaria x ananassa HOM05D005335 ORTHO05D006472 1.4e-24 117.1 184 65.2
CAN.G1305.23 Capsicum annuum HOM05D005335 ORTHO05D006472 4.0e-24 115.5 179 62.0
Sed0012251 Sechium edule HOM05D005335 ORTHO05D006472 4.0e-24 115.5 172 63.4
Cc04_g09930 Coffea canephora HOM05D005335 ORTHO05D006472 6.9e-24 114.8 176 59.7
FAN18G1337 Fragaria x ananassa HOM05D005335 ORTHO05D006472 6.9e-24 114.8 181 65.7
FvH4_5g08350 Fragaria vesca HOM05D005335 ORTHO05D006472 1.2e-23 114.0 181 64.6
Gohir.A04G026600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 1.2e-23 114.0 138 52.9
FAN08G1274 Fragaria x ananassa HOM05D005335 ORTHO05D006472 2.0e-23 113.2 184 63.6
HanXRQChr16g0498141 Helianthus annuus HOM05D005335 ORTHO05D006472 2.0e-23 113.2 176 63.1
Sopen03g032000 Solanum pennellii HOM05D005335 ORTHO05D006472 7.6e-23 111.3 182 62.1
CSS0021703 Camellia sinensis var. sinensis HOM05D005335 ORTHO05D006472 9.9e-23 110.9 172 43.0
FAN13G0785 Fragaria x ananassa HOM05D005335 ORTHO05D006472 9.9e-23 110.9 183 55.7
HanXRQChr09g0273241 Helianthus annuus HOM05D005335 ORTHO05D006472 1.3e-22 110.5 172 59.3
Prupe.5G150800 Prunus persica HOM05D005335 ORTHO05D006472 1.3e-22 110.5 167 65.3
Manes.14G051200 Manihot esculenta HOM05D005335 ORTHO05D006472 2.9e-22 109.4 174 63.8
Solyc03g112920.1 Solanum lycopersicum HOM05D005335 ORTHO05D006472 2.9e-22 109.4 182 61.5
Rhsim12G0175000 Rhododendron simsii HOM05D005335 ORTHO05D006472 3.8e-22 109.0 174 51.7
Aqoxy5G03368 Aquilegia oxysepala HOM05D005335 ORTHO05D006472 6.4e-22 108.2 174 55.7
CSS0038536 Camellia sinensis var. sinensis HOM05D005335 ORTHO05D006472 1.1e-21 107.5 177 48.0
Gohir.D09G247500 Gossypium hirsutum HOM05D005335 ORTHO05D006472 1.1e-21 107.5 177 45.2
Gohir.A09G247000 Gossypium hirsutum HOM05D005335 ORTHO05D006472 1.9e-21 106.7 177 50.3
Gorai.006G272000 Gossypium raimondii HOM05D005335 ORTHO05D006472 2.4e-21 106.3 177 44.6
PGSC0003DMG400018091 Solanum tuberosum HOM05D005335 ORTHO05D006472 3.2e-21 105.9 179 59.8
Aqoxy3G00598 Aquilegia oxysepala HOM05D005335 ORTHO05D006472 5.4e-21 105.1 171 55.6
Nitab4.5_0000514g0170 Nicotiana tabacum HOM05D005335 ORTHO05D006472 1.2e-20 104.0 174 60.9
Nitab4.5_0002403g0010 Nicotiana tabacum HOM05D005335 ORTHO05D006472 1.2e-20 104.0 178 60.1
Oeu005014.1 Olea europaea HOM05D005335 ORTHO05D006472 1.6e-20 103.6 171 55.0
VMungo1215G0398 Vigna mungo HOM05D005335 ORTHO05D006472 1.6e-20 103.6 176 62.5
Actinidia36728 Actinidia chinensis HOM05D005335 ORTHO05D006472 2.1e-20 103.2 142 45.8
Peaxi162Scf00009g00007 Petunia axillaris HOM05D005335 ORTHO05D006472 2.1e-20 103.2 159 59.1
Gohir.D08G258700 Gossypium hirsutum HOM05D005335 ORTHO05D006472 2.7e-20 102.8 177 42.9
Sed0021893 Sechium edule HOM05D005335 ORTHO05D006472 2.7e-20 102.8 174 51.7
PSO017G0745 Papaver somniferum HOM05D005335 ORTHO05D006472 7.8e-20 101.3 188 50.5
PSO478G2775 Papaver somniferum HOM05D005335 ORTHO05D006472 7.8e-20 101.3 188 55.9
Psat4g066680 Pisum sativum HOM05D005335 ORTHO05D006472 1.3e-19 100.5 174 61.5
TPR.G19227 Trifolium pratense HOM05D005335 ORTHO05D006472 3.0e-19 99.4 174 60.9
Ca_26102_v3 Cicer arietinum L. HOM05D005335 ORTHO05D006472 1.5e-18 97.1 174 59.2
Gorai.004G276200 Gossypium raimondii HOM05D005335 ORTHO05D006472 1.9e-18 96.7 175 42.9
Lalb_Chr07g0183461 Lupinus albus HOM05D005335 ORTHO05D006472 4.3e-18 95.5 174 59.2
Glyma.17G130400 Glycine max HOM05D005335 ORTHO05D006472 9.6e-18 94.4 182 58.8
Actinidia25571 Actinidia chinensis HOM05D005335 ORTHO05D006472 1.3e-17 94.0 120 56.7
A01p25690 Brassica napus HOM05D005335 ORTHO05D006472 1.6e-17 93.6 173 43.4
BraA01t02445Z Brassica rapa HOM05D005335 ORTHO05D006472 1.6e-17 93.6 173 43.4
Medtr4g103250 Medicago truncatula HOM05D005335 ORTHO05D006472 1.6e-17 93.6 174 60.9
GSVIVG01008545001 Vitis vinifera HOM05D005335 ORTHO05D006472 2.1e-17 93.2 92 88.0
BolC1t03128H Brassica oleracea HOM05D005335 ORTHO05D006472 4.8e-17 92.0 173 42.2
THA.LOC104821517 Tarenaya hassleriana HOM05D005335 ORTHO05D006472 6.2e-17 91.7 178 58.4
BcaB05g23008 Brassica carinata HOM05D005335 ORTHO05D006472 1.1e-16 90.9 173 42.2
Lalb_Chr13g0297231 Lupinus albus HOM05D005335 ORTHO05D006472 1.1e-16 90.9 174 46.6
MBI11_g05328_MAGBIO Magnolia biondii HOM05D001420 ORTHO05D002488 1.1e-16 90.9 158 61.4
A06p19120 Brassica napus HOM05D005335 ORTHO05D006472 1.8e-16 90.1 173 40.5
BraA06t24996Z Brassica rapa HOM05D005335 ORTHO05D006472 1.8e-16 90.1 173 40.5
Oeu030248.1 Olea europaea HOM05D005335 ORTHO05D006472 3.1e-16 89.4 175 54.3
Glyma.05G048500 Glycine max HOM05D005335 ORTHO05D006472 5.3e-16 88.6 175 60.0
PSO478G4723 Papaver somniferum HOM05D005335 ORTHO05D006472 6.9e-16 88.2 205 48.3
Lj4g0005056 Lotus japonicus HOM05D005335 ORTHO05D006472 9.0e-16 87.8 174 44.3
BcaC09g49876 Brassica carinata HOM05D005335 ORTHO05D006472 1.2e-15 87.4 173 59.0
AT3G48550 Arabidopsis thaliana HOM05D005335 ORTHO05D006472 1.5e-15 87.0 173 39.3
EL10Ac5g11411 Beta vulgaris HOM05D005335 ORTHO05D006472 3.4e-15 85.9 126 45.2
AL5G28000 Arabidopsis lyrata HOM05D005335 ORTHO05D006472 4.5e-15 85.5 173 39.3
BcaC07g39341 Brassica carinata HOM05D005335 ORTHO05D006472 5.8e-15 85.1 173 39.9
C08p23580 Brassica napus HOM05D005335 ORTHO05D006472 5.8e-15 85.1 173 39.9
BolC8t49988H Brassica oleracea HOM05D005335 ORTHO05D006472 5.8e-15 85.1 173 39.9
PSO017G4217 Papaver somniferum HOM05D005335 ORTHO05D006472 7.6e-15 84.7 205 48.3
DCAR_007490 Daucus carota HOM05D005335 ORTHO05D006472 1.3e-14 84.0 174 36.8
THA.LOC104818185 Tarenaya hassleriana HOM05D005335 ORTHO05D006472 1.3e-14 84.0 175 53.1
Sp5g13430 Schrenkiella parvula HOM05D005335 ORTHO05D006472 1.7e-14 83.6 122 45.1
Thhalv10010777m.g Eutrema salsugineum HOM05D005335 ORTHO05D006472 6.4e-14 81.6 167 40.1
Carub.0005s1474 Capsella rubella HOM05D005335 ORTHO05D006472 8.4e-14 81.3 172 39.0
Migut.I00507 Erythranthe guttata HOM05D005335 ORTHO05D006472 8.4e-14 81.3 184 52.2
Migut.D01260 Erythranthe guttata HOM05D005335 ORTHO05D006472 1.1e-13 80.9 180 51.1
Aa31LG4G17170 Aethionema arabicum HOM05D005335 ORTHO05D006472 1.9e-13 80.1 85 51.8
CANSAT80G0357 Cannabis sativa HOM05D005335 ORTHO05D006472 1.9e-13 80.1 247 41.7
Sc04g0000630 Simmondsia chinensis HOM05D005335 ORTHO05D006472 3.2e-13 79.3 164 36.6
Ah.11g045430 Amaranthus hybridus HOM05D005335 ORTHO05D006472 4.2e-13 79.0 126 42.1
BcaB01g00799 Brassica carinata HOM05D005335 ORTHO05D006472 2.7e-12 76.3 174 38.5
AUR62029609 Chenopodium quinoa HOM05D005335 ORTHO05D006472 2.7e-12 76.3 124 41.9
CARHR157350 Cardamine hirsuta HOM05D005335 ORTHO05D006472 3.5e-12 75.9 125 48.0
AUR62034828 Chenopodium quinoa HOM05D005335 ORTHO05D006472 4.6e-12 75.5 125 40.8
unitig_744.g24466 Utricularia gibba HOM05D005335 ORTHO05D006472 4.6e-12 75.5 121 45.5
Actinidia08873 Actinidia chinensis HOM05D001420 ORTHO05D002488 1.0e-11 74.3 172 39.0
HanXRQChr05g0155191 Helianthus annuus HOM05D005335 ORTHO05D006472 3.9e-11 72.4 172 51.7
C01p32260 Brassica napus HOM05D005335 ORTHO05D006472 9.6e-10 67.8 173 56.1
Ah.04g153430 Amaranthus hybridus HOM05D005335 ORTHO05D006472 2.1e-09 66.6 186 36.6
SGA_v2.0_scaffold161G37793 Striga asiatica HOM05D005335 ORTHO05D006472 8.1e-09 64.7 122 38.5
HPP92_009722 Vanilla planifolia HOM05D005335 ORTHO05D006472 1.1e-08 64.3 174 31.0
SGA_v2.0_scaffold5G02870 Striga asiatica HOM05D005335 ORTHO05D006472 1.8e-08 63.5 132 52.3
THA.LOC104798946 Tarenaya hassleriana HOM05D005335 ORTHO05D006472 1.8e-08 63.5 175 47.4
Lj9P479T20 Lonicera japonica HOM05D005335 ORTHO05D006472 6.4e-06 55.1 69 88.4


User provided reference genes

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